Alison Motsinger-Reif - Publications

2007 Vanderbilt University, Nashville, TN 

38 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Armstrong ND, Srinivasasainagendra V, Ammous F, Assimes TL, Beitelshees AL, Brody J, Cade BE, Ida Chen YD, Chen H, de Vries PS, Floyd JS, Franceschini N, Guo X, Hellwege JN, House JS, ... ... Motsinger-Reif A, et al. Whole genome sequence analysis of apparent treatment resistant hypertension status in participants from the Trans-Omics for Precision Medicine program. Frontiers in Genetics. 14: 1278215. PMID 38162683 DOI: 10.3389/fgene.2023.1278215  0.474
2019 Kennedy K, Thomas R, Durrant J, Jiang T, Motsinger-Reif A, Breen M. Genome-wide DNA copy number analysis and targeted transcriptional analysis of canine histiocytic malignancies identifies diagnostic signatures and highlights disruption of spindle assembly complex. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. PMID 31011867 DOI: 10.1007/S10577-019-09606-0  0.34
2019 TANG Y, SHAH H, SUN X, PERKINS BA, WAGNER MJ, MOTSINGER-REIF A, BUSE JB, MYCHALECKYJ J, POP-BUSUI R, DORIA A. 321-OR: A Genetic Locus on Chromosome 1p36 Associated with Cardiovascular Autonomic Neuropathy in Type 2 Diabetes Diabetes. 68: 321-OR. DOI: 10.2337/Db19-321-Or  0.315
2018 TANG Y, MYCHALECKYJ J, PERKINS BA, POP-BUSUI R, WAGNER MJ, MOTSINGER-REIF A, BUSE JB, SHAH H, DORIA A. A Genetic Locus on Chromosome 2q24 Predicting Peripheral Neuropathy Risk in Type 2 Diabetes Diabetes. 67: 56-OR. DOI: 10.2337/Db18-56-Or  0.323
2016 Scott Chialvo CH, Che R, Reif D, Motsinger-Reif A, Reed LK. Eigenvector metabolite analysis reveals dietary effects on the association among metabolite correlation patterns, gene expression, and phenotypes. Metabolomics : Official Journal of the Metabolomic Society. 12. PMID 28845148 DOI: 10.1007/S11306-016-1117-3  0.313
2016 Shahin MH, Gong Y, McDonough CW, Rotroff DM, Beitelshees AL, Garrett TJ, Gums JG, Motsinger-Reif A, Chapman AB, Turner ST, Boerwinkle E, Frye RF, Fiehn O, Cooper-DeHoff RM, Kaddurah-Daouk R, et al. A Genetic Response Score for Hydrochlorothiazide Use: Insights From Genomics and Metabolomics Integration. Hypertension. PMID 27381900 DOI: 10.1161/Hypertensionaha.116.07328  0.345
2016 Reinhart JM, Motsinger-Reif A, Dickey A, Yale S, Trepanier LA. Genome-Wide Association Study in Immunocompetent Patients with Delayed Hypersensitivity to Sulfonamide Antimicrobials. Plos One. 11: e0156000. PMID 27272151 DOI: 10.1371/Journal.Pone.0156000  0.333
2016 Kim S, Toledo JB, Nho K, Risacher SL, Shen L, Thompson JW, Williams LSJ, Tenenbaum J, Han X, Baillie RA, Thambisetty M, Casanova R, Varma S, Legido-Quigley C, Mahmoudiandehkordi S, ... Motsinger-Reif A, et al. Genetic Influence On Levels Of Targeted Metabolites Associated With Alzheimer’S Disease Alzheimers & Dementia. 12. DOI: 10.1016/J.Jalz.2016.06.276  0.313
2015 He YJ, Winham SJ, Hoskins JM, Glass S, Paul J, Brown R, Motsinger-Reif A, McLeod HL. Carboplatin/taxane-induced gastrointestinal toxicity: a pharmacogenomics study on the SCOTROC1 trial. The Pharmacogenomics Journal. PMID 26194361 DOI: 10.1038/Tpj.2015.52  0.358
2015 Roode SC, Rotroff D, Avery AC, Suter SE, Bienzle D, Schiffman JD, Motsinger-Reif A, Breen M. Genome-wide assessment of recurrent genomic imbalances in canine leukemia identifies evolutionarily conserved regions for subtype differentiation. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. PMID 26037708 DOI: 10.1007/S10577-015-9475-7  0.342
2015 Poorman K, Borst L, Moroff S, Roy S, Labelle P, Motsinger-Reif A, Breen M. Comparative cytogenetic characterization of primary canine melanocytic lesions using array CGH and fluorescence in situ hybridization. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 23: 171-86. PMID 25511566 DOI: 10.1007/S10577-014-9444-6  0.305
2015 Clay ELJ, Motsinger-Reif A, Hoskins J, Veit L, Calikoglu A, Redding-Lallinger R. The Polymorphisms in the Vitamin D Receptor Gene and Disease Severity in Sickle Cell Disease Advances in Biological Chemistry. 5: 24-33. DOI: 10.4236/Abc.2015.51003  0.343
2015 Rotroff D, Breen M, Motsinger-Reif A. Abstract LB-177: Novel approaches for improving interpretation and predictive models of comparative genomic hybridization data Cancer Research. 75. DOI: 10.1158/1538-7445.Am2015-Lb-177  0.338
2014 Beam A, Motsinger-Reif A. Beyond IC50s: Towards Robust Statistical Methods for in vitro Association Studies. Journal of Pharmacogenomics & Pharmacoproteomics. 5: 1000121. PMID 25110614 DOI: 10.4172/2153-0645.1000121  0.323
2014 Jack J, Rotroff D, Motsinger-Reif A. Lymphoblastoid cell lines models of drug response: successes and lessons from this pharmacogenomic model. Current Molecular Medicine. 14: 833-40. PMID 25109794 DOI: 10.2174/1566524014666140811113946  0.374
2014 Thomas R, Borst L, Rotroff D, Motsinger-Reif A, Lindblad-Toh K, Modiano JF, Breen M. Genomic profiling reveals extensive heterogeneity in somatic DNA copy number aberrations of canine hemangiosarcoma. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 22: 305-19. PMID 24599718 DOI: 10.1007/S10577-014-9406-Z  0.364
2014 Agler C, Nielsen DM, Urkasemsin G, Singleton A, Tonomura N, Sigurdsson S, Tang R, Linder K, Arepalli S, Hernandez D, Lindblad-Toh K, van de Leemput J, Motsinger-Reif A, O'Brien DP, Bell J, et al. Canine hereditary ataxia in old english sheepdogs and gordon setters is associated with a defect in the autophagy gene encoding RAB24. Plos Genetics. 10: e1003991. PMID 24516392 DOI: 10.1371/Journal.Pgen.1003991  0.348
2014 Chen HW, Small GW, Motsinger-Reif A, Suter SE, Richards KL. VH1-44 gene usage defines a subset of canine B-cell lymphomas associated with better patient survival. Veterinary Immunology and Immunopathology. 157: 125-30. PMID 24332568 DOI: 10.1016/J.Vetimm.2013.10.020  0.332
2014 Ginn J, Sacco J, Wong YY, Motsinger-Reif A, Chun R, Trepanier LA. Positive association between a glutathione-S-transferase polymorphism and lymphoma in dogs. Veterinary and Comparative Oncology. 12: 227-36. PMID 23020265 DOI: 10.1111/Vco.12000  0.325
2013 Su Y, Nielsen D, Zhu L, Richards K, Suter S, Breen M, Motsinger-Reif A, Osborne J. Gene selection and cancer type classification of diffuse large-B-cell lymphoma using a bivariate mixture model for two-species data. Human Genomics. 7: 2. PMID 23289441 DOI: 10.1186/1479-7364-7-2  0.319
2012 Hertz D, Dees E, Roy S, Motsinger-Reif A, Drobish A, Clark L, McLeod H, Carey L. Abstract PD10-07: Patients carrying CYP2C8*3 are at increased risk of paclitaxel-induced neuropathy Cancer Research. 72. DOI: 10.1158/0008-5472.Sabcs12-Pd10-07  0.347
2011 Peters EJ, Motsinger-Reif A, Havener TM, Everitt L, Hardison NE, Watson VG, Wagner M, Richards KL, Province MA, McLeod HL. Pharmacogenomic characterization of US FDA-approved cytotoxic drugs. Pharmacogenomics. 12: 1407-15. PMID 22008047 DOI: 10.2217/Pgs.11.92  0.305
2011 Angstadt AY, Motsinger-Reif A, Thomas R, Kisseberth WC, Guillermo Couto C, Duval DL, Nielsen DM, Modiano JF, Breen M. Characterization of canine osteosarcoma by array comparative genomic hybridization and RT-qPCR: signatures of genomic imbalance in canine osteosarcoma parallel the human counterpart. Genes, Chromosomes & Cancer. 50: 859-74. PMID 21837709 DOI: 10.1002/Gcc.20908  0.366
2011 Watson VG, Hardison NE, Harris T, Motsinger-Reif A, McLeod HL. Genomic profiling in CEPH cell lines distinguishes between the camptothecins and indenoisoquinolines. Molecular Cancer Therapeutics. 10: 1839-45. PMID 21750217 DOI: 10.1158/1535-7163.Mct-10-0872  0.332
2011 Hedan B, Thomas R, Motsinger-Reif A, Abadie J, Andre C, Cullen J, Breen M. Molecular cytogenetic characterization of canine histiocytic sarcoma: A spontaneous model for human histiocytic cancer identifies deletion of tumor suppressor genes and highlights influence of genetic background on tumor behavior. Bmc Cancer. 11: 201. PMID 21615919 DOI: 10.1186/1471-2407-11-201  0.326
2011 Watson VG, Motsinger-Reif A, Hardison NE, Peters EJ, Havener TM, Everitt L, Auman JT, Comins DL, McLeod HL. Identification and replication of loci involved in camptothecin-induced cytotoxicity using CEPH pedigrees. Plos One. 6: e17561. PMID 21573211 DOI: 10.1371/Journal.Pone.0017561  0.346
2011 Thomas R, Seiser EL, Motsinger-Reif A, Borst L, Valli VE, Kelley K, Suter SE, Argyle D, Burgess K, Bell J, Lindblad-Toh K, Modiano JF, Breen M. Refining tumor-associated aneuploidy through 'genomic recoding' of recurrent DNA copy number aberrations in 150 canine non-Hodgkin lymphomas. Leukemia & Lymphoma. 52: 1321-35. PMID 21375435 DOI: 10.3109/10428194.2011.559802  0.352
2011 Richards KL, Motsinger-Reif A, Chen H, Fedoriw YD, Fan C, Nielsen DM, Thomas R, Smith C, Dave SS, Perou CM, Breen M, Suter SE. Characterizing Canine Lymphoma As a Potential Large Animal Model of Human Diffuse Large B-Cell Lymphoma Blood. 118: 5193-5193. DOI: 10.1182/Blood.V118.21.5193.5193  0.311
2011 Clay ELJ, Motsinger-Reif A, Hoskins J, Veit L, Barrow DA, Calikoglu A, Redding-Lallinger R. The Vitamin D Receptor Gene and Disease Severity in Sickle Cell Anemia Blood. 118: 2122-2122. DOI: 10.1182/Blood.V118.21.2122.2122  0.352
2011 He Y, Wood SJ, Paul J, Motsinger-Reif A, Auman T, Hoskins JM, Brown R, McLeod HL. Erratum: Abstract OIII-B-1: Genetic markers associated with platinum/taxanes-induced gastrointestinal toxicity in SCOTROC1 Trial (Clinical Pharmacology and Therapeutics (2011) 89 (S66) DOI:10.1038/clpt.2010.334) Clinical Pharmacology & Therapeutics. 90. DOI: 10.1038/Clpt.2011.24  0.306
2011 He Y, Wood SJ, Paul J, Motsinger-Reif A, Auman T, Hoskins JM, Brown R, McLeod HL. Genetic markers associated with platinum/taxanesinduced gastrointestinal toxicity in SCOTROC1trial Clinical Pharmacology & Therapeutics. DOI: 10.1038/Clpt.2010.326  0.358
2010 Ribaudo HJ, Liu H, Schwab M, Schaeffeler E, Eichelbaum M, Motsinger-Reif AA, Ritchie MD, Zanger UM, Acosta EP, Morse GD, Gulick RM, Robbins GK, Clifford D, Haas DW. Effect of CYP2B6, ABCB1, and CYP3A5 polymorphisms on efavirenz pharmacokinetics and treatment response: an AIDS Clinical Trials Group study. The Journal of Infectious Diseases. 202: 717-22. PMID 20662624 DOI: 10.1086/655470  0.427
2009 Reif DM, Motsinger-Reif AA, McKinney BA, Rock MT, Crowe JE, Moore JH. Integrated analysis of genetic and proteomic data identifies biomarkers associated with adverse events following smallpox vaccination. Genes and Immunity. 10: 112-9. PMID 18923431 DOI: 10.1038/Gene.2008.80  0.415
2008 Hardison NE, Fanelli TJ, Dudek SM, Reif DM, Ritchie MD, Motsinger-Reif AA. A Balanced Accuracy Fitness Function Leads to Robust Analysis using Grammatical Evolution Neural Networks in the Case of Class Imbalance. Genetic and Evolutionary Computation Conference : [Proceedings] / Sponsored by Acm Sigevo. Genetic and Evolutionary Computation Conference. 2008: 353-354. PMID 21197143 DOI: 10.1145/1389095.1389159  0.397
2008 Motsinger-Reif AA, Ritchie MD. Neural networks for genetic epidemiology: past, present, and future. Biodata Mining. 1: 3. PMID 18822147 DOI: 10.1186/1756-0381-1-3  0.473
2008 Motsinger-Reif AA, Fanelli TJ, Davis AC, Ritchie MD. Power of grammatical evolution neural networks to detect gene-gene interactions in the presence of error. Bmc Research Notes. 1: 65. PMID 18710518 DOI: 10.1186/1756-0500-1-65  0.449
2008 Motsinger-Reif AA, Reif DM, Fanelli TJ, Ritchie MD. A comparison of analytical methods for genetic association studies. Genetic Epidemiology. 32: 767-78. PMID 18561203 DOI: 10.1002/Gepi.20345  0.462
2008 Motsinger-Reif AA, Dudek SM, Hahn LW, Ritchie MD. Comparison of approaches for machine-learning optimization of neural networks for detecting gene-gene interactions in genetic epidemiology. Genetic Epidemiology. 32: 325-40. PMID 18265411 DOI: 10.1002/Gepi.20307  0.454
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