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Christophe Combet - Publications

Affiliations: 
Université Paris Diderot - Paris 7, Paris, Île-de-France, France 
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34 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Teppa E, Nadalin F, Combet C, Zea DJ, David L, Carbone A. Coevolution analysis of amino-acids reveals diversified drug-resistance solutions in viral sequences: a case study of hepatitis B virus. Virus Evolution. 6: veaa006. PMID 32158552 DOI: 10.1093/Ve/Veaa006  0.385
2019 Aouacheria A, Navratil V, Combet C. Database and Bioinformatic Analysis of BCL-2 Family Proteins and BH3-Only Proteins. Methods in Molecular Biology (Clifton, N.J.). 1877: 23-43. PMID 30535996 DOI: 10.1007/978-1-4939-8861-7_2  0.37
2017 Rajoriya N, Combet C, Zoulim F, Janssen HLA. How viral genetic variants and genotypes influence disease and treatment outcome of chronic hepatitis B. Time for an individualized approach? Journal of Hepatology. PMID 28736138 DOI: 10.1016/J.Jhep.2017.07.011  0.339
2017 Virlogeux V, Pradat P, Hartig-Lavie K, Bailly F, Maynard M, Ouziel G, Poinsot D, Lebossé F, Ecochard M, Radenne S, Benmakhlouf S, Koffi J, Lack P, Scholtes C, Uhres AC, ... ... Combet C, et al. Direct-acting antiviral therapy decreases hepatocellular carcinoma recurrence rate in cirrhotic patients with chronic hepatitis C. Liver International : Official Journal of the International Association For the Study of the Liver. PMID 28423231 DOI: 10.1111/Liv.13456  0.363
2016 Velay A, Jeulin H, Eschlimann M, Malvé B, Goehringer F, Bensenane M, Frippiat JP, Abraham P, Ismail A, Murray JM, Combet C, Zoulim F, Bronowicki JP, Schvoerer E. Characterization of hepatitis B virus surface antigen variability and impact on HBs antigen clearance under nucleos(t)ide analogue therapy. Journal of Viral Hepatitis. PMID 26742490 DOI: 10.1111/Jvh.12498  0.374
2015 Aouacheria A, Combet C, Tompa P, Hardwick JM. Redefining the BH3 Death Domain as a 'Short Linear Motif'. Trends in Biochemical Sciences. 40: 736-48. PMID 26541461 DOI: 10.1016/J.Tibs.2015.09.007  0.363
2014 Rech de Laval V, Deléage G, Aouacheria A, Combet C. BCL2DB: database of BCL-2 family members and BH3-only proteins. Database : the Journal of Biological Databases and Curation. 2014: bau013. PMID 24608034 DOI: 10.1093/database/bau013  0.697
2014 Hayer J, Rodriguez C, Germanidis G, Deléage G, Zoulim F, Pawlotsky JM, Combet C. Ultradeep pyrosequencing and molecular modeling identify key structural features of hepatitis B virus RNase H, a putative target for antiviral intervention. Journal of Virology. 88: 574-82. PMID 24173223 DOI: 10.1128/Jvi.03000-13  0.78
2013 Aouacheria A, Rech de Laval V, Combet C, Hardwick JM. Evolution of Bcl-2 homology motifs: homology versus homoplasy. Trends in Cell Biology. 23: 103-11. PMID 23199982 DOI: 10.1016/J.Tcb.2012.10.010  0.39
2013 Hayer J, Jadeau F, Deléage G, Kay A, Zoulim F, Combet C. HBVdb: a knowledge database for Hepatitis B Virus. Nucleic Acids Research. 41: D566-70. PMID 23125365 DOI: 10.1093/Nar/Gks1022  0.79
2013 Hayer J, Rodriguez C, Germanidis G, Deleage G, Zoulim F, Pawlotsky J, Combet C. 123 STRUCTURE OF THE HEPATITIS B VIRUS RNase H, A TARGET FOR NEW ANTIVIRAL DRUG DEVELOPMENT, UNRAVELED BY ULTRA-DEEP PYROSEQUENCING AND MOLECULAR MODELING Journal of Hepatology. 58: S55. DOI: 10.1016/S0168-8278(13)60125-7  0.729
2012 Fofana I, Fafi-Kremer S, Carolla P, Fauvelle C, Zahid MN, Turek M, Heydmann L, Cury K, Hayer J, Combet C, Cosset FL, Pietschmann T, Hiet MS, Bartenschlager R, Habersetzer F, et al. Mutations that alter use of hepatitis C virus cell entry factors mediate escape from neutralizing antibodies. Gastroenterology. 143: 223-233.e9. PMID 22503792 DOI: 10.1053/J.Gastro.2012.04.006  0.739
2012 Jadeau F, Grangeasse C, Shi L, Mijakovic I, Deléage G, Combet C. BYKdb: the Bacterial protein tYrosine Kinase database. Nucleic Acids Research. 40: D321-4. PMID 22080550 DOI: 10.1093/Nar/Gkr915  0.695
2011 Carolla P, Fofana I, Fafi-Kremer S, Zahid M, Cury K, Turek M, Bastien-Valle M, Cosset F, Pietschmann T, Hayer J, Combet C, Habersetzer F, Doffoël M, Keck Z, Foung S, et al. 784 CELL ENTRY FACTOR USAGE AND VIRAL EVASION IN HEPATITIS C VIRUS INFECTION IN VIVO Journal of Hepatology. 54: S315. DOI: 10.1016/S0168-8278(11)60786-1  0.721
2010 Pellet J, Tafforeau L, Lucas-Hourani M, Navratil V, Meyniel L, Achaz G, Guironnet-Paquet A, Aublin-Gex A, Caignard G, Cassonnet P, Chaboud A, Chantier T, Deloire A, Demeret C, Le Breton M, ... ... Combet C, et al. ViralORFeome: an integrated database to generate a versatile collection of viral ORFs. Nucleic Acids Research. 38: D371-8. PMID 20007148 DOI: 10.1093/Nar/Gkp1000  0.457
2009 Joosten RP, Salzemann J, Bloch V, Stockinger H, Berglund AC, Blanchet C, Bongcam-Rudloff E, Combet C, Da Costa AL, Deleage G, Diarena M, Fabbretti R, Fettahi G, Flegel V, Gisel A, et al. PDB_REDO: automated re-refinement of X-ray structure models in the PDB. Journal of Applied Crystallography. 42: 376-384. PMID 22477769 DOI: 10.1107/S0021889809008784  0.738
2009 Combet C, Bettler E, Terreux R, Garnier N, Deléage G. The euHCVdb suite of in silico tools for investigating the structural impact of mutations in hepatitis C virus proteins. Infectious Disorders Drug Targets. 9: 272-8. PMID 19519481 DOI: 10.2174/1871526510909030272  0.73
2008 Jadeau F, Bechet E, Cozzone AJ, Deléage G, Grangeasse C, Combet C. Identification of the idiosyncratic bacterial protein tyrosine kinase (BY-kinase) family signature. Bioinformatics (Oxford, England). 24: 2427-30. PMID 18772155 DOI: 10.1093/Bioinformatics/Btn462  0.681
2008 Ratinier M, Boulant S, Combet C, Targett-Adams P, McLauchlan J, Lavergne JP. Transcriptional slippage prompts recoding in alternate reading frames in the hepatitis C virus (HCV) core sequence from strain HCV-1. The Journal of General Virology. 89: 1569-78. PMID 18559926 DOI: 10.1099/Vir.0.83614-0  0.449
2007 Combet C, Garnier N, Charavay C, Grando D, Crisan D, Lopez J, Dehne-Garcia A, Geourjon C, Bettler E, Hulo C, Le Mercier P, Bartenschlager R, Diepolder H, Moradpour D, Pawlotsky JM, et al. euHCVdb: the European hepatitis C virus database. Nucleic Acids Research. 35: D363-6. PMID 17142229 DOI: 10.1093/Nar/Gkl970  0.805
2006 Kuiken C, Combet C, Bukh J, Shin-I T, Deleage G, Mizokami M, Richardson R, Sablon E, Yusim K, Pawlotsky JM, Simmonds P. A comprehensive system for consistent numbering of HCV sequences, proteins and epitopes. Hepatology (Baltimore, Md.). 44: 1355-61. PMID 17058236 DOI: 10.1002/Hep.21377  0.741
2006 Blanchet C, Lefort V, Combet C, Deléage G. GPS@ bioinformatics portal: from network to EGEE grid. Studies in Health Technology and Informatics. 120: 187-93. PMID 16823137  0.663
2006 Kuiken C, Mizokami M, Deleage G, Yusim K, Penin F, Shin-I T, Charavay C, Tao N, Crisan D, Grando D, Dalwani A, Geourjon C, Agrawal A, Combet C. Hepatitis C databases, principles and utility to researchers. Hepatology (Baltimore, Md.). 43: 1157-65. PMID 16628639 DOI: 10.1002/Hep.21162  0.801
2005 Simmonds P, Bukh J, Combet C, Deléage G, Enomoto N, Feinstone S, Halfon P, Inchauspé G, Kuiken C, Maertens G, Mizokami M, Murphy DG, Okamoto H, Pawlotsky JM, Penin F, et al. Consensus proposals for a unified system of nomenclature of hepatitis C virus genotypes. Hepatology (Baltimore, Md.). 42: 962-73. PMID 16149085 DOI: 10.1002/Hep.20819  0.422
2005 Jambon M, Andrieu O, Combet C, Deléage G, Delfaud F, Geourjon C. The SuMo server: 3D search for protein functional sites. Bioinformatics (Oxford, England). 21: 3929-30. PMID 16141250 DOI: 10.1093/Bioinformatics/Bti645  0.757
2004 Combet C, Penin F, Geourjon C, Deléage G. HCVDB: hepatitis C virus sequences database. Applied Bioinformatics. 3: 237-40. PMID 15702954 DOI: 10.2165/00822942-200403040-00005  0.817
2003 Perrière G, Combet C, Penel S, Blanchet C, Thioulouse J, Geourjon C, Grassot J, Charavay C, Gouy M, Duret L, Deléage G. Integrated databanks access and sequence/structure analysis services at the PBIL. Nucleic Acids Research. 31: 3393-9. PMID 12824334 DOI: 10.1093/Nar/Gkg530  0.802
2002 Combet C, Jambon M, Deléage G, Geourjon C. Geno3D: automatic comparative molecular modelling of protein. Bioinformatics (Oxford, England). 18: 213-4. PMID 11836238 DOI: 10.1093/Bioinformatics/18.1.213  0.784
2002 Combet C, Penin F, Geourjon C, Deléage G. HCVDB : base de données de séquences du virus de l’hépatite C et outils bio-informatiques d’analyse MéDecine/Sciences. 18: 639-639. DOI: 10.1051/Medsci/2002185639  0.756
2001 Penin F, Combet C, Germanidis G, Frainais PO, Deléage G, Pawlotsky JM. Conservation of the conformation and positive charges of hepatitis C virus E2 envelope glycoprotein hypervariable region 1 points to a role in cell attachment. Journal of Virology. 75: 5703-10. PMID 11356980 DOI: 10.1128/Jvi.75.12.5703-5710.2001  0.717
2001 Deléage G, Combet C, Blanchet C, Geourjon C. ANTHEPROT: an integrated protein sequence analysis software with client/server capabilities. Computers in Biology and Medicine. 31: 259-67. PMID 11334635 DOI: 10.1016/S0010-4825(01)00008-7  0.782
2001 Geourjon C, Combet C, Blanchet C, Deléage G. Identification of related proteins with weak sequence identity using secondary structure information. Protein Science : a Publication of the Protein Society. 10: 788-97. PMID 11274470 DOI: 10.1110/Ps.30001  0.792
2000 Blanchet C, Combet C, Geourjon C, Deléage G. MPSA: integrated system for multiple protein sequence analysis with client/server capabilities. Bioinformatics (Oxford, England). 16: 286-7. PMID 10869021 DOI: 10.1093/Bioinformatics/16.3.286  0.795
2000 Combet C, Blanchet C, Geourjon C, Deléage G. NPS@: network protein sequence analysis. Trends in Biochemical Sciences. 25: 147-50. PMID 10694887 DOI: 10.1016/S0968-0004(99)01540-6  0.782
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