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Russ Altman, M.D./Ph.D. - Publications

Affiliations: 
Stanford University, Palo Alto, CA 
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106 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Bastarache L, Delozier S, Pandit A, He J, Lewis A, Annis AC, LeFaive J, Denny JC, Carroll RJ, Altman RB, Hughey JJ, Zawistowski M, Peterson JF. The phenotype-genotype reference map: Improving biobank data science through replication. American Journal of Human Genetics. PMID 37607538 DOI: 10.1016/j.ajhg.2023.07.012  0.428
2023 Xu H, Woicik A, Poon H, Altman RB, Wang S. Multilingual translation for zero-shot biomedical classification using BioTranslator. Nature Communications. 14: 738. PMID 36759510 DOI: 10.1038/s41467-023-36476-2  0.352
2021 McInnes G, Sharo AG, Koleske ML, Brown JEH, Norstad M, Adhikari AN, Wang S, Brenner SE, Halpern J, Koenig BA, Magnus DC, Gallagher RC, Giacomini KM, Altman RB. Opportunities and challenges for the computational interpretation of rare variation in clinically important genes. American Journal of Human Genetics. 108: 535-548. PMID 33798442 DOI: 10.1016/j.ajhg.2021.03.003  0.321
2020 Wang S, Flynn ER, Altman RB. Gaussian Embedding for Large-scale Gene Set Analysis. Nature Machine Intelligence. 2: 387-395. PMID 32968711 DOI: 10.1038/s42256-020-0193-2  0.33
2020 Lever J, Altman R, Kim JD. Extending TextAE for annotation of non-contiguous entities. Genomics & Informatics. 18: e15. PMID 32634869 DOI: 10.5808/Gi.2020.18.2.E15  0.306
2017 Altman RB. Artificial Intelligence (AI) Systems for Interpreting Complex Medical Data Sets. Clinical Pharmacology and Therapeutics. PMID 28182259 DOI: 10.1002/Cpt.650  0.303
2016 Daneshjou R, Cavallari LH, Weeke PE, Karczewski KJ, Drozda K, Perera MA, Johnson JA, Klein TE, Bustamante CD, Roden DM, Shaffer C, Denny JC, Zehnder JL, Altman RB. Population-specific single-nucleotide polymorphism confers increased risk of venous thromboembolism in African Americans. Molecular Genetics & Genomic Medicine. 4: 513-520. PMID 27652279 DOI: 10.1002/Mgg3.226  0.359
2015 Kohlhoff KJ, Shukla D, Lawrenz M, Bowman GR, Konerding DE, Belov D, Altman RB, Pande VS. Corrigendum: Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways. Nature Chemistry. 7: 759. PMID 26291949 DOI: 10.1038/Nchem.2272  0.754
2015 Mugzach O, Peleg M, Bagley SC, Guter SJ, Cook EH, Altman RB. An ontology for Autism Spectrum Disorder (ASD) to infer ASD phenotypes from Autism Diagnostic Interview-Revised data. Journal of Biomedical Informatics. 56: 333-47. PMID 26151311 DOI: 10.1016/J.Jbi.2015.06.026  0.547
2015 Mugzach O, Peleg M, Bagley SC, Guter SJ, Cook EH, Altman RB. An ontology for Autism Spectrum Disorder (ASD) to infer ASD phenotypes from Autism Diagnostic Interview-Revised data Journal of Biomedical Informatics. 56: 333-347. DOI: 10.1016/j.jbi.2015.06.026  0.53
2014 MacArthur DG, Manolio TA, Dimmock DP, Rehm HL, Shendure J, Abecasis GR, Adams DR, Altman RB, Antonarakis SE, Ashley EA, Barrett JC, Biesecker LG, Conrad DF, Cooper GM, Cox NJ, et al. Guidelines for investigating causality of sequence variants in human disease. Nature. 508: 469-76. PMID 24759409 DOI: 10.1038/Nature13127  0.355
2014 Karczewski KJ, Snyder M, Altman RB, Tatonetti NP. Coherent Functional Modules Improve Transcription Factor Target Identification, Cooperativity Prediction, and Disease Association Plos Genetics. 10. PMID 24516403 DOI: 10.1371/Journal.Pgen.1004122  0.516
2014 Kohlhoff KJ, Shukla D, Lawrenz M, Bowman GR, Konerding DE, Belov D, Altman RB, Pande VS. Cloud-based simulations on Google Exacycle reveal ligand modulation of GPCR activation pathways Nature Chemistry. 6: 15-21. PMID 24345941 DOI: 10.1038/Nchem.1821  0.775
2014 Lawrenz M, Kohlhoff K, Shukla D, Bowman G, Altman R, Pande V. Investigating Ligand-Modulation of GPCR Activation Pathways Biophysical Journal. 106: 14a. DOI: 10.1016/J.Bpj.2013.11.130  0.777
2013 Behr ER, Ritchie MD, Tanaka T, Kääb S, Crawford DC, Nicoletti P, Floratos A, Sinner MF, Kannankeril PJ, Wilde AA, Bezzina CR, Schulze-Bahr E, Zumhagen S, Guicheney P, Bishopric NH, ... ... Altman RB, et al. Genome wide analysis of drug-induced torsades de pointes: lack of common variants with large effect sizes. Plos One. 8: e78511. PMID 24223155 DOI: 10.1371/Journal.Pone.0078511  0.519
2013 Hodoglugil U, Carrillo MW, Hebert JM, Karachaliou N, Rosell RC, Altman RB, Klein TE. PharmGKB summary: very important pharmacogene information for the epidermal growth factor receptor. Pharmacogenetics and Genomics. 23: 636-42. PMID 23962910 DOI: 10.1097/Fpc.0B013E3283655091  0.753
2013 Tatonetti NP, Denny JC, Altman RB. Response to 'Use of an algorithm for identifying hidden drug-drug interactions in adverse event reports' by Gooden et al. Journal of the American Medical Informatics Association : Jamia. 20: 591. PMID 23876381 DOI: 10.1136/Amiajnl-2012-001603  0.601
2013 Daneshjou R, Tatonetti NP, Karczewski KJ, Sagreiya H, Bourgeois S, Drozda K, Burmester JK, Tsunoda T, Nakamura Y, Kubo M, Tector M, Limdi NA, Cavallari LH, Perera M, Johnson JA, ... ... Altman RB, et al. Pathway analysis of genome-wide data improves warfarin dose prediction. Bmc Genomics. 14: S11. PMID 23819817 DOI: 10.1186/1471-2164-14-S3-S11  0.538
2013 Perera MA, Cavallari LH, Limdi NA, Gamazon ER, Konkashbaev A, Daneshjou R, Pluzhnikov A, Crawford DC, Wang J, Liu N, Tatonetti N, Bourgeois S, Takahashi H, Bradford Y, Burkley BM, ... ... Altman RB, et al. Genetic variants associated with warfarin dose in African-American individuals: a genome-wide association study. Lancet. 382: 790-6. PMID 23755828 DOI: 10.1016/S0140-6736(13)60681-9  0.479
2013 White RW, Tatonetti NP, Shah NH, Altman RB, Horvitz E. Web-scale pharmacovigilance: listening to signals from the crowd. Journal of the American Medical Informatics Association : Jamia. 20: 404-8. PMID 23467469 DOI: 10.1136/amiajnl-2012-001482  0.528
2013 Kohlhoff KJ, Pande VS, Altman RB. K-means for parallel architectures using all-prefix-sum sorting and updating steps Ieee Transactions On Parallel and Distributed Systems. 24: 1602-1612. DOI: 10.1109/Tpds.2012.234  0.765
2012 Tatonetti NP, Ye PP, Daneshjou R, Altman RB. Data-driven prediction of drug effects and interactions. Science Translational Medicine. 4: 125ra31. PMID 22422992 DOI: 10.1126/scitranslmed.3003377  0.529
2012 Karczewski KJ, Tirrell RP, Cordero P, Tatonetti NP, Dudley JT, Salari K, Snyder M, Altman RB, Kim SK. Interpretome: a freely available, modular, and secure personal genome interpretation engine. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 339-50. PMID 22174289  0.518
2012 Delp SL, Ku JP, Pande VS, Sherman MA, Altman RB. Simbios: an NIH national center for physics-based simulation of biological structures. Journal of the American Medical Informatics Association : Jamia. 19: 186-9. PMID 22081222 DOI: 10.1136/Amiajnl-2011-000488  0.419
2012 Tatonetti NP, Fernald GH, Altman RB. A novel signal detection algorithm for identifying hidden drug-drug interactions in adverse event reports Journal of the American Medical Informatics Association. 19: 79-85. PMID 21676938 DOI: 10.1136/amiajnl-2011-000214  0.507
2011 Karczewski KJ, Tatonetti NP, Landt SG, Yang X, Slifer T, Altman RB, Snyder M. Cooperative transcription factor associations discovered using regulatory variation. Proceedings of the National Academy of Sciences of the United States of America. 108: 13353-8. PMID 21828005 DOI: 10.1073/Pnas.1103105108  0.504
2011 Kohlhoff KJ, Sosnick MH, Hsu WT, Pande VS, Altman RB. CAMPAIGN: an open-source library of GPU-accelerated data clustering algorithms. Bioinformatics (Oxford, England). 27: 2322-3. PMID 21712246 DOI: 10.1093/Bioinformatics/Btr386  0.767
2011 Tatonetti NP, Denny JC, Murphy SN, Fernald GH, Krishnan G, Castro V, Yue P, Tsao PS, Tsau PS, Kohane I, Roden DM, Altman RB. Detecting drug interactions from adverse-event reports: interaction between paroxetine and pravastatin increases blood glucose levels. Clinical Pharmacology and Therapeutics. 90: 133-42. PMID 21613990 DOI: 10.1038/Clpt.2011.83  0.624
2011 Thorn CF, Marsh S, Carrillo MW, McLeod HL, Klein TE, Altman RB. PharmGKB summary: fluoropyrimidine pathways. Pharmacogenetics and Genomics. 21: 237-42. PMID 20601926 DOI: 10.1097/Fpc.0B013E32833C6107  0.752
2011 Kohlhoff KJ, Sosnick MH, Hsu WT, Pande VS, Altman RB. CAMPAIGN: An open-source library of GPU-accelerated data clustering algorithms Bioinformatics. 27: 2322-2323. DOI: 10.1093/bioinformatics/btr386  0.758
2010 Tatonetti NP, Dudley JT, Sagreiya H, Butte AJ, Altman RB. An integrative method for scoring candidate genes from association studies: application to warfarin dosing. Bmc Bioinformatics. 11: S9. PMID 21044367 DOI: 10.1186/1471-2105-11-S9-S9  0.532
2010 Van Booven D, Marsh S, McLeod H, Carrillo MW, Sangkuhl K, Klein TE, Altman RB. Cytochrome P450 2C9-CYP2C9. Pharmacogenetics and Genomics. 20: 277-81. PMID 20150829 DOI: 10.1097/Fpc.0B013E3283349E84  0.736
2010 Wu S, Liu T, Altman RB. Identification of recurring protein structure microenvironments and discovery of novel functional sites around CYS residues. Bmc Structural Biology. 10: 4. PMID 20122268 DOI: 10.1186/1472-6807-10-4  0.68
2010 Garten Y, Tatonetti NP, Altman RB. Improving the prediction of pharmacogenes using text-derived drug-gene relationships. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 305-14. PMID 19908383 DOI: 10.1142/9789814295291_0033  0.555
2009 Oshiro C, Marsh S, McLeod H, Carrillo MW, Klein T, Altman R. Taxane pathway. Pharmacogenetics and Genomics. 19: 979-83. PMID 21151855 DOI: 10.1097/FPC.0b013e3283335277  0.749
2009 Tatonetti NP, Liu T, Altman RB. Predicting drug side-effects by chemical systems biology. Genome Biology. 10: 238. PMID 19723347 DOI: 10.1186/gb-2009-10-9-238  0.51
2008 Schmidt JP, Delp SL, Sherman MA, Taylor CA, Pande VS, Altman RB. The Simbios National Center: Systems Biology in Motion. Proceedings of the Ieee. Institute of Electrical and Electronics Engineers. 96: 1266. PMID 20107615 DOI: 10.1109/JPROC.2008.925454  0.421
2008 Halperin I, Glazer DS, Wu S, Altman RB. The FEATURE framework for protein function annotation: modeling new functions, improving performance, and extending to novel applications. Bmc Genomics. 9: S2. PMID 18831785 DOI: 10.1186/1471-2164-9-S2-S2  0.697
2008 Dinov ID, Rubin D, Lorensen W, Dugan J, Ma J, Murphy S, Kirschner B, Bug W, Sherman M, Floratos A, Kennedy D, Jagadish HV, Schmidt J, Athey B, Califano A, ... ... Altman R, et al. iTools: a framework for classification, categorization and integration of computational biology resources. Plos One. 3: e2265. PMID 18509477 DOI: 10.1371/Journal.Pone.0002265  0.778
2008 Wu S, Liang MP, Altman RB. The SeqFEATURE library of 3D functional site models: comparison to existing methods and applications to protein function annotation. Genome Biology. 9: R8. PMID 18197987 DOI: 10.1186/Gb-2008-9-1-R8  0.69
2007 Dugan JM, Altman RB. Using surface envelopes to constrain molecular modeling Protein Science. 16: 1266-1273. PMID 17586766 DOI: 10.1110/ps.062733407  0.774
2006 Lin Z, Altman RB, Owen AB. Confidentiality in genome research. Science (New York, N.Y.). 313: 441-2. PMID 16873628 DOI: 10.1126/Science.313.5786.441B  0.42
2006 Phuong TM, Lin Z, Altman RB. Choosing SNPs using feature selection. Journal of Bioinformatics and Computational Biology. 4: 241-57. PMID 16819782 DOI: 10.1142/S0219720006001941  0.403
2006 Yeh I, Altman RB. Drug Targets for Plasmodium falciparum: a post-genomic review/survey. Mini Reviews in Medicinal Chemistry. 6: 177-202. PMID 16472186 DOI: 10.2174/138955706775475957  0.477
2005 Phuong TM, Lin Z, Altman RB. Choosing SNPs using feature selection. Proceedings / Ieee Computational Systems Bioinformatics Conference, Csb. Ieee Computational Systems Bioinformatics Conference. 301-9. PMID 16447987 DOI: 10.1109/CSB.2005.22  0.402
2005 Mooney SD, Liang MH, DeConde R, Altman RB. Structural characterization of proteins using residue environments. Proteins. 61: 741-7. PMID 16245324 DOI: 10.1002/prot.20661  0.531
2005 Wren JD, Chang JT, Pustejovsky J, Adar E, Garner HR, Altman RB. Biomedical term mapping databases. Nucleic Acids Research. 33: D289-93. PMID 15608198 DOI: 10.1093/Nar/Gki137  0.459
2005 Peleg M, Rubin D, Altman RB. Using Petri Net tools to study properties and dynamics of biological systems. Journal of the American Medical Informatics Association : Jamia. 12: 181-99. PMID 15561791 DOI: 10.1197/Jamia.M1637  0.588
2004 Chang JT, Altman RB. Extracting and characterizing gene-drug relationships from the literature. Pharmacogenetics. 14: 577-86. PMID 15475731 DOI: 10.1097/00008571-200409000-00002  0.487
2004 Lin Z, Altman RB. Finding haplotype tagging SNPs by use of principal components analysis. American Journal of Human Genetics. 75: 850-61. PMID 15389393 DOI: 10.1086/425587  0.437
2004 Rubin DL, Carrillo M, Woon M, Conroy J, Klein TE, Altman RB. A resource to acquire and summarize pharmacogenetics knowledge in the literature. Studies in Health Technology and Informatics. 107: 793-7. PMID 15360921  0.775
2004 Peleg M, Tu S, Manindroo A, Altman RB. Modeling and analyzing biomedical processes using workflow/Petri Net models and tools. Studies in Health Technology and Informatics. 107: 74-8. PMID 15360778  0.572
2004 Lin Z, Owen AB, Altman RB. Genetics. Genomic research and human subject privacy. Science (New York, N.Y.). 305: 183. PMID 15247459 DOI: 10.1126/Science.1095019  0.428
2004 Yeh I, Hanekamp T, Tsoka S, Karp PD, Altman RB. Computational analysis of Plasmodium falciparum metabolism: organizing genomic information to facilitate drug discovery. Genome Research. 14: 917-24. PMID 15078855 DOI: 10.1101/Gr.2050304  0.514
2004 Liu Y, Liu XS, Wei L, Altman RB, Batzoglou S. Eukaryotic regulatory element conservation analysis and identification using comparative genomics. Genome Research. 14: 451-8. PMID 14993210 DOI: 10.1101/Gr.1327604  0.474
2004 Chang JT, Schütze H, Altman RB. GAPSCORE: finding gene and protein names one word at a time. Bioinformatics (Oxford, England). 20: 216-25. PMID 14734313 DOI: 10.1093/Bioinformatics/Btg393  0.482
2004 Dugan JM, Altman RB. Using surface envelopes for discrimination of molecular models Protein Science. 13: 15-24. PMID 14691217 DOI: 10.1110/ps.03385504  0.781
2004 Rubin DL, Carrillo M, Woon M, Conroy J, Klein TE, Altman RB. A resource to acquire and summarize pharmacogenetics knowledge in the literature Studies in Health Technology and Informatics. 107: 793-797. DOI: 10.3233/978-1-60750-949-3-793  0.753
2004 Liang MP, Troyanskaya OG, Laederach A, Brutlag DL, Altman RB. Computational functional genomics Ieee Signal Processing Magazine. 21: 62-69. DOI: 10.1109/Msp.2004.1359143  0.511
2003 Wei L, Altman RB. Recognizing complex, asymmetric functional sites in protein structures using a Bayesian scoring function. Journal of Bioinformatics and Computational Biology. 1: 119-38. PMID 15290784  0.469
2003 Gabashvili IS, Whirl-Carrillo M, Bada M, Banatao DR, Altman RB. Ribosomal dynamics inferred from variations in experimental measurements. Rna (New York, N.Y.). 9: 1301-7. PMID 14561879 DOI: 10.1261/Rna.5141503  0.777
2003 Denko NC, Fontana LA, Hudson KM, Sutphin PD, Raychaudhuri S, Altman R, Giaccia AJ. Investigating hypoxic tumor physiology through gene expression patterns. Oncogene. 22: 5907-14. PMID 12947397 DOI: 10.1038/Sj.Onc.1206703  0.477
2003 Raychaudhuri S, Chang JT, Imam F, Altman RB. The computational analysis of scientific literature to define and recognize gene expression clusters. Nucleic Acids Research. 31: 4553-60. PMID 12888516 DOI: 10.1093/Nar/Gkg636  0.599
2003 Troyanskaya OG, Dolinski K, Owen AB, Altman RB, Botstein D. A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae). Proceedings of the National Academy of Sciences of the United States of America. 100: 8348-53. PMID 12826619 DOI: 10.1073/Pnas.0832373100  0.647
2003 Altman RB, Dugan JM. Defining bioinformatics and structural bioinformatics Methods of Biochemical Analysis. 44: 3-14. PMID 12647379  0.766
2003 Raychaudhuri S, Altman RB. A literature-based method for assessing the functional coherence of a gene group. Bioinformatics (Oxford, England). 19: 396-401. PMID 12584126 DOI: 10.1093/Bioinformatics/Btg002  0.434
2003 Yeh I, Karp PD, Noy NF, Altman RB. Knowledge acquisition, consistency checking and concurrency control for Gene Ontology (GO). Bioinformatics (Oxford, England). 19: 241-8. PMID 12538245 DOI: 10.1093/Bioinformatics/19.2.241  0.522
2003 Raychaudhuri S, Schütze H, Altman RB. Inclusion of Textual Documentation in the Analysis of Multidimensional Data Sets: Application to Gene Expression Data Machine Learning. 52: 119-145. DOI: 10.1023/A:1023901610396  0.447
2002 Chang JT, Altman RB. Promises of text processing: natural language processing meets AI. Drug Discovery Today. 7: 992-3. PMID 12546913 DOI: 10.1016/S1359-6446(02)02457-1  0.391
2002 Lin Z, Hewett M, Altman RB. Using binning to maintain confidentiality of medical data. Proceedings / Amia ... Annual Symposium. Amia Symposium. 454-8. PMID 12463865  0.452
2002 Troyanskaya OG, Garber ME, Brown PO, Botstein D, Altman RB. Nonparametric methods for identifying differentially expressed genes in microarray data. Bioinformatics (Oxford, England). 18: 1454-61. PMID 12424116 DOI: 10.1093/Bioinformatics/18.11.1454  0.621
2002 Chang JT, Schütze H, Altman RB. Creating an online dictionary of abbreviations from MEDLINE. Journal of the American Medical Informatics Association : Jamia. 9: 612-20. PMID 12386112 DOI: 10.1197/Jamia.M1139  0.458
2002 Raychaudhuri S, Schütze H, Altman RB. Using text analysis to identify functionally coherent gene groups. Genome Research. 12: 1582-90. PMID 12368251 DOI: 10.1101/Gr.116402  0.447
2002 Waugh A, Gendron P, Altman R, Brown JW, Case D, Gautheret D, Harvey SC, Leontis N, Westbrook J, Westhof E, Zuker M, Major F. RNAML: a standard syntax for exchanging RNA information. Rna (New York, N.Y.). 8: 707-17. PMID 12088144 DOI: 10.1017/S1355838202028017  0.316
2002 Peleg M, Yeh I, Altman RB. Modelling biological processes using workflow and Petri Net models. Bioinformatics (Oxford, England). 18: 825-37. PMID 12075018 DOI: 10.1093/Bioinformatics/18.6.825  0.689
2002 Kivi M, Liu X, Raychaudhuri S, Altman RB, Small PM. Determining the genomic locations of repetitive DNA sequences with a whole-genome microarray: IS6110 in Mycobacterium tuberculosis. Journal of Clinical Microbiology. 40: 2192-8. PMID 12037086 DOI: 10.1128/Jcm.40.6.2192-2198.2002  0.424
2002 Whirl-Carrillo M, Gabashvili IS, Bada M, Banatao DR, Altman RB. Mining biochemical information: lessons taught by the ribosome. Rna (New York, N.Y.). 8: 279-89. PMID 12003488 DOI: 10.1017/S135583820202407X  0.782
2002 Raychaudhuri S, Chang JT, Sutphin PD, Altman RB. Associating genes with gene ontology codes using a maximum entropy analysis of biomedical literature. Genome Research. 12: 203-14. PMID 11779846 DOI: 10.1101/Gr.199701  0.592
2002 Williams GA, Dugan JM, Altman RB. Constrained global optimization for estimating molecular structure from atomic distances. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 8: 523-47. PMID 11694181 DOI: 10.1089/106652701753216521  0.772
2002 Peleg M, Gabashvili I, Altman R. Qualitative models of molecular function: linking genetic polymorphisms of tRNA to their functional sequelae Proceedings of the Ieee. 90: 1875-1886. DOI: 10.1109/JPROC.2002.805304  0.748
2002 Chang J, Carrillo MW, Waugh A, Wei L, Altman RB. Scoring Functions Sensitive to Alignment Error Have a More Difficult Search: A Paradox for Threading Acs Symposium Series. 827: 309-320.  0.749
2001 Klein TE, Chang JT, Cho MK, Easton KL, Fergerson R, Hewett M, Lin Z, Liu Y, Liu S, Oliver DE, Rubin DL, Shafa F, Stuart JM, Altman RB. Integrating genotype and phenotype information: an overview of the PharmGKB project. Pharmacogenetics Research Network and Knowledge Base. The Pharmacogenomics Journal. 1: 167-70. PMID 11908751 DOI: 10.1038/Sj.Tpj.6500035  0.575
2001 Garber ME, Troyanskaya OG, Schluens K, Petersen S, Thaesler Z, Pacyna-Gengelbach M, van de Rijn M, Rosen GD, Perou CM, Whyte RI, Altman RB, Brown PO, Botstein D, Petersen I. Diversity of gene expression in adenocarcinoma of the lung. Proceedings of the National Academy of Sciences of the United States of America. 98: 13784-9. PMID 11707590 DOI: 10.1073/Pnas.241500798  0.582
2001 Altman RB, Raychaudhuri S. Whole-genome expression analysis: challenges beyond clustering. Current Opinion in Structural Biology. 11: 340-7. PMID 11406385 DOI: 10.1016/S0959-440X(00)00212-8  0.464
2001 Troyanskaya O, Cantor M, Sherlock G, Brown P, Hastie T, Tibshirani R, Botstein D, Altman RB. Missing value estimation methods for DNA microarrays Bioinformatics. 17: 520-525. PMID 11395428 DOI: 10.1093/Bioinformatics/17.6.520  0.743
2001 Raychaudhuri S, Sutphin PD, Chang JT, Altman RB. Basic microarray analysis: grouping and feature reduction. Trends in Biotechnology. 19: 189-93. PMID 11301132 DOI: 10.1016/S0167-7799(01)01599-2  0.61
2001 Chang JT, Raychaudhuri S, Altman RB. Including biological literature improves homology search. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 374-83. PMID 11262956  0.594
2001 Waugh A, Williams GA, Wei L, Altman RB. Using meta computing tools to facilitate large-scale analyses of biological databases. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 360-71. PMID 11262955 DOI: 10.1142/9789814447362_0035  0.509
2001 Sutphin PD, Raychaudhuri S, Denko NC, Altman RB, Giaccia AJ. Application of supervised machine learning to identify genes associated with the hypoxia response Nature Genetics. 27: 90-90. DOI: 10.1038/87320  0.377
2000 Raychaudhuri S, Stuart JM, Liu X, Small PM, Altman RB. Pattern recognition of genomic features with microarrays: site typing of Mycobacterium tuberculosis strains. Proceedings / ... International Conference On Intelligent Systems For Molecular Biology ; Ismb. International Conference On Intelligent Systems For Molecular Biology. 8: 286-95. PMID 10977090  0.411
2000 Raychaudhuri S, Stuart JM, Altman RB. Principal components analysis to summarize microarray experiments: application to sporulation time series. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 455-66. PMID 10902193  0.443
2000 Bada MA, Altman RB. Computational modeling of structural experimental data. Methods in Enzymology. 317: 470-91. PMID 10829296 DOI: 10.1016/S0076-6879(00)17030-2  0.66
1999 Altman RB, Bada M, Chai XJ, Carillo MW, Chen RO, Abernethy NF. RiboWeb: an ontology-based system for collaborative molecular biology Ieee Intelligent Systems and Their Applications. 14: 68-76. DOI: 10.1109/5254.796092  0.675
1998 Wei L, Chang J, Altman R. Chapter 11 Statistical analysis of protein structures: Using environmental features for multiple purposes New Comprehensive Biochemistry. 32: 207-225. DOI: 10.1016/S0167-7306(08)60468-8  0.488
1997 Wei L, Altman RB, Chang JT. Using the radial distributions of physical features to compare amino acid environments and align amino acid sequences. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 465-76. PMID 9390315  0.428
1997 Felciano RM, Chen RO, Altman RB. RNA secondary structure as a reusable interface to biological information resources. Gene. 190: GC59-70. PMID 9197551 DOI: 10.1016/S0378-1119(96)00855-4  0.74
1996 Felciano RM, Altman RB. Lamprey: tracking users on the World Wide Web. Proceedings : a Conference of the American Medical Informatics Association / ... Amia Annual Fall Symposium. Amia Fall Symposium. 757-61. PMID 8947767  0.73
1993 Altman RB, Pachter R, Jardetzky O. Structural uncertainty of proteins in solution by NMR. A re-evaluation of the structure of the Lac repressor headpiece Applied Magnetic Resonance. 4: 441-460. DOI: 10.1007/Bf03162459  0.491
1992 Liu Y, Zhao D, Altman R, Jardetzky O. A systematic comparison of three structure determination methods from NMR data: dependence upon quality and quantity of data. Journal of Biomolecular Nmr. 2: 373-88. PMID 1511237 DOI: 10.1007/Bf01874815  0.563
1991 Arrowsmith C, Pachter R, Altman R, Jardetzky O. The solution structures of Escherichia coli trp repressor and trp aporepressor at an intermediate resolution. European Journal of Biochemistry / Febs. 202: 53-66. PMID 1935980 DOI: 10.1111/J.1432-1033.1991.Tb16344.X  0.556
1991 Pachter R, Altman RB, Czaplicki J, Jardetzky O. Comparison of the NMR solution structures of cyclosporin A determined by different techniques Journal of Magnetic Resonance (1969). 92: 468-479. DOI: 10.1016/0022-2364(91)90343-R  0.501
1990 Arrowsmith CH, Pachter R, Altman RB, Iyer SB, Jardetzky O. Sequence-specific 1H NMR assignments and secondary structure in solution of Escherichia coli trp repressor. Biochemistry. 29: 6332-41. PMID 2207078 DOI: 10.1021/Bi00479A002  0.477
1990 Pachter R, Altman RB, Jardetzky O. The dependence of a protein solution structure on the quality of the input NMR data. Application of the double-iterated Kalman filter technique to oxytocin Journal of Magnetic Resonance (1969). 89: 578-584. DOI: 10.1016/0022-2364(90)90342-7  0.541
1989 Altman RB, Jardetzky O. Heuristic refinement method for determination of solution structure of proteins from nuclear magnetic resonance data. Methods in Enzymology. 177: 218-46. PMID 2691845 DOI: 10.1016/0076-6879(89)77013-0  0.516
1988 Brinkley JF, Altman RB, Duncan BS, Buchanan BG, Jardetzky O. Heuristic refinement method for the derivation of protein solution structures: validation on cytochrome b562. Journal of Chemical Information and Computer Sciences. 28: 194-210. PMID 3235473 DOI: 10.1021/Ci00060A005  0.682
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