Alyaa M Abdel-haleem - Publications

King Abdullah University of Science and Technology - KAUST 
constraint-based metabolic modeling, infectious diseases

9/14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Abdel-Haleem AM, Ravikumar V, Ji B, Mineta K, Gao X, Nielsen J, Gojobori T, Mijakovic I. Integrated Metabolic Modeling, Culturing, and Transcriptomics Explain Enhanced Virulence of Vibrio cholerae during Coinfection with Enterotoxigenic Escherichia coli. Msystems. 5. PMID 32900868 DOI: 10.1128/mSystems.00491-20  0.6
2018 Abdel-Haleem AM, Hefzi H, Mineta K, Gao X, Gojobori T, Palsson BO, Lewis NE, Jamshidi N. Functional interrogation of Plasmodium genus metabolism identifies species- and stage-specific differences in nutrient essentiality and drug targeting. Plos Computational Biology. 14: e1005895. PMID 29300748 DOI: 10.1371/Journal.Pcbi.1005895  0.88
2017 Pandit S, Ravikumar V, Abdel-Haleem AM, Derouiche A, Mokkapati VRSS, Sihlbom C, Mineta K, Gojobori T, Gao X, Westerlund F, Mijakovic I. Low Concentrations of Vitamin C Reduce the Synthesis of Extracellular Polymers and Destabilize Bacterial Biofilms. Frontiers in Microbiology. 8: 2599. PMID 29317857 DOI: 10.3389/Fmicb.2017.02599  0.6
2017 Abdel-Haleem AM, Lewis NE, Jamshidi N, Mineta K, Gao X, Gojobori T. The Emerging Facets of Non-Cancerous Warburg Effect. Frontiers in Endocrinology. 8: 279. PMID 29109698 DOI: 10.3389/Fendo.2017.00279  0.88
2016 Hefzi H, Ang KS, Hanscho M, Bordbar A, Ruckerbauer D, Lakshmanan M, Orellana CA, Baycin-Hizal D, Huang Y, Ley D, Martinez VS, Kyriakopoulos S, Jiménez NE, Zielinski DC, Quek LE, ... ... Abdel-Haleem AM, et al. A Consensus Genome-scale Reconstruction of Chinese Hamster Ovary Cell Metabolism. Cell Systems. 3: 434-443.e8. PMID 27883890 DOI: 10.1016/J.Cels.2016.10.020  0.88
2016 Ginsburg H, Abdel-Haleem AM. Malaria Parasite Metabolic Pathways (MPMP) Upgraded with Targeted Chemical Compounds Trends in Parasitology. 32: 7-9. PMID 26530861 DOI: 10.1016/J.Pt.2015.10.003  0.88
2015 Ates LS, Ummels R, Commandeur S, van der Weerd R, Sparrius M, Weerdenburg E, Alber M, Kalscheuer R, Piersma SR, Abdallah AM, Abd El Ghany M, Abdel-Haleem AM, Pain A, Jiménez CR, Bitter W, et al. Essential Role of the ESX-5 Secretion System in Outer Membrane Permeability of Pathogenic Mycobacteria Plos Genetics. 11. DOI: 10.1371/journal.pgen.1005190  0.88
2014 Ferreira AJ, Siam R, Setubal JC, Moustafa A, Sayed A, Chambergo FS, Dawe AS, Ghazy MA, Sharaf H, Ouf A, Alam I, Abdel-Haleem AM, Lehvaslaiho H, Ramadan E, Antunes A, et al. Core microbial functional activities in ocean environments revealed by global metagenomic profiling analyses. Plos One. 9: e97338. PMID 24921648 DOI: 10.1371/Journal.Pone.0097338  0.88
2013 Lewis NE, Abdel-Haleem AM. The evolution of genome-scale models of cancer metabolism. Frontiers in Physiology. 4: 237. PMID 24027532 DOI: 10.3389/Fphys.2013.00237  0.88
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2020 Subudhi AK, O'Donnell AJ, Ramaprasad A, Abkallo HM, Kaushik A, Ansari HR, Abdel-Haleem AM, Ben Rached F, Kaneko O, Culleton R, Reece SE, Pain A. Malaria parasites regulate intra-erythrocytic development duration via serpentine receptor 10 to coordinate with host rhythms. Nature Communications. 11: 2763. PMID 32488076 DOI: 10.1038/S41467-020-16593-Y  0.01
2015 Abdel-Haleem AM, Rchiad Z, Khan BK, Abdallah AM, Naeem R, Nikhat Sheerin S, Solovyev V, Ahmed A, Pain A. Genome Sequence of a Multidrug-Resistant Strain of Stenotrophomonas maltophilia with Carbapenem Resistance, Isolated from King Abdullah Medical City, Makkah, Saudi Arabia. Genome Announcements. 3. PMID 26472828 DOI: 10.1128/Genomea.01166-15  0.01
2015 Ates LS, Ummels R, Commandeur S, van de Weerd R, van der Weerd R, Sparrius M, Weerdenburg E, Alber M, Kalscheuer R, Piersma SR, Abdallah AM, Abd El Ghany M, Abdel-Haleem AM, Pain A, Jiménez CR, et al. Essential Role of the ESX-5 Secretion System in Outer Membrane Permeability of Pathogenic Mycobacteria. Plos Genetics. 11: e1005190. PMID 25938982 DOI: 10.1371/Journal.Pgen.1005190  0.01
2014 Mustafa GA, Abd-Elgawad A, Abdel-Haleem AM, Siam R. Egypt's Red Sea coast: phylogenetic analysis of cultured microbial consortia in industrialized sites. Frontiers in Microbiology. 5: 363. PMID 25157243 DOI: 10.3389/Fmicb.2014.00363  0.01
2011 Abdel-Haleem AM, El-Zeiry MI, Mahran LG, Abou-Aisha K, Rady MH, Rohde J, Mostageer M, Spahn-Langguth H. Expression of RFC/SLC19A1 is associated with tumor type in bladder cancer patients. Plos One. 6: e21820. PMID 21760912 DOI: 10.1371/Journal.Pone.0021820  0.01
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