Botond Sipos - Publications

Affiliations: 
European Bioinformatics Institute, Hinxton, England, United Kingdom 
Area:
bioinformatics
Website:
http://sbotond.github.io

13 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Cruz-Garcia L, O'Brien G, Sipos B, Mayes S, Love MI, Turner DJ, Badie C. Generation of a Transcriptional Radiation Exposure Signature in Human Blood Using Long-Read Nanopore Sequencing. Radiation Research. PMID 31829904 DOI: 10.1667/Rr15476.1  0.349
2018 Garalde DR, Snell EA, Jachimowicz D, Sipos B, Lloyd JH, Bruce M, Pantic N, Admassu T, James P, Warland A, Jordan M, Ciccone J, Serra S, Keenan J, Martin S, et al. Highly parallel direct RNA sequencing on an array of nanopores. Nature Methods. PMID 29334379 DOI: 10.1038/Nmeth.4577  0.319
2014 Schwarz RF, Trinh A, Sipos B, Brenton JD, Goldman N, Markowetz F. Phylogenetic quantification of intra-tumour heterogeneity. Plos Computational Biology. 10: e1003535. PMID 24743184 DOI: 10.1371/Journal.Pcbi.1003535  0.667
2013 de Beer TA, Laskowski RA, Parks SL, Sipos B, Goldman N, Thornton JM. Amino acid changes in disease-associated variants differ radically from variants observed in the 1000 genomes project dataset. Plos Computational Biology. 9: e1003382. PMID 24348229 DOI: 10.1371/Journal.Pcbi.1003382  0.625
2013 Engström PG, Steijger T, Sipos B, Grant GR, Kahles A, Rätsch G, Goldman N, Hubbard TJ, Harrow J, Guigó R, Bertone P. Systematic evaluation of spliced alignment programs for RNA-seq data. Nature Methods. 10: 1185-91. PMID 24185836 DOI: 10.1038/Nmeth.2722  0.528
2013 Cvejic A, Haer-Wigman L, Stephens JC, Kostadima M, Smethurst PA, Frontini M, van den Akker E, Bertone P, Bielczyk-MaczyÅ„ska E, Farrow S, Fehrmann RS, Gray A, de Haas M, Haver VG, Jordan G, ... ... Sipos B, et al. SMIM1 underlies the Vel blood group and influences red blood cell traits. Nature Genetics. 45: 542-5. PMID 23563608 DOI: 10.1038/Ng.2603  0.591
2013 Goldman N, Bertone P, Chen S, Dessimoz C, LeProust EM, Sipos B, Birney E. Towards practical, high-capacity, low-maintenance information storage in synthesized DNA. Nature. 494: 77-80. PMID 23354052 DOI: 10.1038/Nature11875  0.601
2012 Sipos B, Massingham T, Stütz AM, Goldman N. An improved protocol for sequencing of repetitive genomic regions and structural variations using mutagenesis and next generation sequencing. Plos One. 7: e43359. PMID 22912860 DOI: 10.1371/Journal.Pone.0043359  0.693
2011 Albers CA, Cvejic A, Favier R, Bouwmans EE, Alessi MC, Bertone P, Jordan G, Kettleborough RN, Kiddle G, Kostadima M, Read RJ, Sipos B, Sivapalaratnam S, Smethurst PA, Stephens J, et al. Exome sequencing identifies NBEAL2 as the causative gene for gray platelet syndrome. Nature Genetics. 43: 735-7. PMID 21765411 DOI: 10.1038/Ng.885  0.52
2011 Sipos B, Massingham T, Jordan GE, Goldman N. PhyloSim - Monte Carlo simulation of sequence evolution in the R statistical computing environment. Bmc Bioinformatics. 12: 104. PMID 21504561 DOI: 10.1186/1471-2105-12-104  0.651
2011 Bihari P, Sipos B, Melika G, Fehér B, Somogyi K, Stone GN, Pénzes Z. Western Palaearctic phylogeography of an inquiline oak gall wasp, Synergus umbraculus Biological Journal of the Linnean Society. 102: 750-764. DOI: 10.1111/J.1095-8312.2010.01609.X  0.309
2008 Somogyi K, Sipos B, Pénzes Z, Kurucz E, Zsámboki J, Hultmark D, Andó I. Evolution of genes and repeats in the Nimrod superfamily. Molecular Biology and Evolution. 25: 2337-47. PMID 18703524 DOI: 10.1093/Molbev/Msn180  0.338
2008 Sipos B, Somogyi K, Andó I, Pénzes Z. T2prhd: a tool to study the patterns of repeat evolution. Bmc Bioinformatics. 9: 27. PMID 18205906 DOI: 10.1186/1471-2105-9-27  0.395
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