Year |
Citation |
Score |
2024 |
Dean HB, Greer RA, Yang SZ, Elston DS, Brett TJ, Roberson ED, Song Y. Multimerization of TREM2 is impaired by Alzheimer's disease-associated variants. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 39032157 DOI: 10.1002/alz.14124 |
0.436 |
|
2020 |
Kober DL, Stuchell-Brereton MD, Kluender CE, Dean HB, Strickland MR, Steinberg DF, Nelson SS, Baban B, Holtzman DM, Frieden C, Alexander-Brett J, Roberson ED, Song Y, Brett TJ. Functional insights from biophysical study of TREM2 interactions with apoE and Aβ. Alzheimer's & Dementia : the Journal of the Alzheimer's Association. PMID 33090700 DOI: 10.1002/alz.12194 |
0.458 |
|
2020 |
Yang H, Ahmad ZA, Song Y. Molecular insight for the role of key residues of calreticulin in its binding activities: A computational study. Computational Biology and Chemistry. 85: 107228. PMID 32062378 DOI: 10.1016/J.Compbiolchem.2020.107228 |
0.404 |
|
2019 |
Dean HB, Roberson ED, Song Y. Neurodegenerative Disease-Associated Variants in TREM2 Destabilize the Apical Ligand-Binding Region of the Immunoglobulin Domain. Frontiers in Neurology. 10: 1252. PMID 32021611 DOI: 10.3389/Fneur.2019.01252 |
0.495 |
|
2019 |
Wang L, Song Y. Molecular insights into the effect of an apoptotic raft-like bilayer on the conformation and dynamics of calreticulin. Biochimica Et Biophysica Acta. Biomembranes. 183146. PMID 31816323 DOI: 10.1016/J.Bbamem.2019.183146 |
0.427 |
|
2018 |
Fancy RM, Kim H, Napier T, Buchsbaum DJ, Zinn KR, Song Y. Calmodulin antagonist enhances DR5-mediated apoptotic signaling in TRA-8 resistant triple negative breast cancer cells. Journal of Cellular Biochemistry. PMID 29663486 DOI: 10.1002/Jcb.26848 |
0.335 |
|
2018 |
Wang L, Murphy-Ullrich JE, Song Y. Multiscale Simulation of the Interaction of Calreticulin-Thrombospondin-1 Complex with a Model Membrane Microdomain. Journal of Biomolecular Structure & Dynamics. 1-33. PMID 29380675 DOI: 10.1080/07391102.2018.1433065 |
0.367 |
|
2018 |
Fancy RM, Li J, Hong H, Mountz JD, Murphy-Ullrich JE, Katiyar SK, Zhang J, Song Y. Cell Surface Calreticulin-LRP1 Binding and its Role in Apoptotic Cell Engulfment Biophysical Journal. 114: 464a-465a. DOI: 10.1016/J.Bpj.2017.11.2562 |
0.34 |
|
2017 |
Wang L, Pan D, Yan Q, Song Y. Activation Mechanisms of αVβ3 Integrin by Binding to Fibronectin: A Computational Study. Protein Science : a Publication of the Protein Society. PMID 28340512 DOI: 10.1002/Pro.3163 |
0.393 |
|
2017 |
Fancy RM, Kim H, Zhou T, Zinn KR, Buchsbaum DJ, Song Y. Calmodulin Binding to Death Receptor 5-mediated Death-inducing Signaling Complex in Breast Cancer Cells. Journal of Cellular Biochemistry. PMID 28092099 DOI: 10.1002/Jcb.25882 |
0.383 |
|
2016 |
Fancy RM, Wang L, Zeng Q, Wang H, Zhou T, Buchsbaum DJ, Song Y. Characterization of the Interactions between Calmodulin and Death Receptor 5 in Triple-Negative and Estrogen Receptor Positive Breast Cancer Cells: An Integrated Experimental and Computational Study. The Journal of Biological Chemistry. PMID 27129269 DOI: 10.1074/Jbc.M116.727727 |
0.427 |
|
2016 |
Yang H, Song Y. Structural Insight for Roles of DR5 Death Domain Mutations on Oligomerization of DR5 Death Domain-FADD Complex in the Death-Inducing Signaling Complex Formation: A Computational Study. Journal of Molecular Modeling. 22: 89. PMID 26995783 DOI: 10.1007/S00894-016-2941-0 |
0.44 |
|
2016 |
Yang H, Murphy-Ullrich JE, Song Y. Molecular Insights for the Role of Key Residues of Calreticulin in its Binding Activities Biophysical Journal. 110: 53a. DOI: 10.1016/J.Bpj.2015.11.349 |
0.398 |
|
2015 |
Wang L, Murphy-Ullrich JE, Song Y. Effect of an Apoptotic Membrane raft on the Conformational and Dynamical Changes of Calreticulin Biophysical Journal. 108: 90a. DOI: 10.1016/J.Bpj.2014.11.525 |
0.346 |
|
2014 |
Wang L, Murphy-Ullrich JE, Song Y. Molecular insight into the effect of lipid bilayer environments on thrombospondin-1 and calreticulin interactions. Biochemistry. 53: 6309-22. PMID 25260145 DOI: 10.1021/Bi500662V |
0.367 |
|
2014 |
Fancy RM, Wang L, Napier T, Lin J, Jing G, Lucius AL, McDonald JM, Zhou T, Song Y. Characterization of calmodulin-Fas death domain interaction: an integrated experimental and computational study. Biochemistry. 53: 2680-8. PMID 24702583 DOI: 10.1021/Bi500228H |
0.422 |
|
2014 |
Fancy RM, Wang H, Zhou T, Song Y. Abstract 2282: Calmodulin binding to DR-5 and the role of CaM-DR-5 binding in DR-5-mediated DISC formation in breast cancer Cancer Research. 74: 2282-2282. DOI: 10.1158/1538-7445.Am2014-2282 |
0.361 |
|
2014 |
Wang L, Murphy-Ullrich J, Song Y. Molecular Insight for the Effect of Lipid Raft on Thrombospondin-1 and Calreticulin Interactions Biophysical Journal. 106: 712a. DOI: 10.1016/J.Bpj.2013.11.3939 |
0.378 |
|
2013 |
Yan Q, McDonald JM, Zhou T, Song Y. Structural insight for the roles of fas death domain binding to FADD and oligomerization degree of the Fas-FADD complex in the death-inducing signaling complex formation: a computational study. Proteins. 81: 377-85. PMID 23042204 DOI: 10.1002/Prot.24193 |
0.416 |
|
2013 |
Napier T, Fancy R, Zhou T, Mountz J, Song Y. Abstract 2955: Effect of the combined treatment of TRA-8, an agonistic DR5 antibody, and tamoxifen on breast cancer cells. Cancer Research. 73: 2955-2955. DOI: 10.1158/1538-7445.Am2013-2955 |
0.309 |
|
2012 |
Fancy R, Napier T, Jing G, McDonald JM, Zhou T, Song Y. Abstract 4754: Quantitative characterization of calmodulin and Fas death domain interactions Cancer Research. 72: 4754-4754. DOI: 10.1158/1538-7445.Am2012-4754 |
0.425 |
|
2011 |
Pan D, Yan Q, Chen Y, McDonald JM, Song Y. Trifluoperazine regulation of calmodulin binding to Fas: a computational study. Proteins. 79: 2543-56. PMID 21656570 DOI: 10.1002/Prot.23081 |
0.451 |
|
2011 |
Yan Q, Murphy-Ullrich JE, Song Y. Molecular and structural insight into the role of key residues of thrombospondin-1 and calreticulin in thrombospondin-1-calreticulin binding. Biochemistry. 50: 566-73. PMID 21142150 DOI: 10.1016/J.Bpj.2010.12.3123 |
0.424 |
|
2011 |
Yan Q, McDonald JM, Song Y. Abstract 19: Structural insight for the role of Fas binding to FADD and oligomerization degree of Fas/FADD complex in death inducing signaling complex formation Cancer Research. 71: 19-19. DOI: 10.1158/1538-7445.Am2011-19 |
0.44 |
|
2010 |
Pan D, Song Y. Role of altered sialylation of the I-like domain of beta1 integrin in the binding of fibronectin to beta1 integrin: thermodynamics and conformational analyses. Biophysical Journal. 99: 208-17. PMID 20655849 DOI: 10.1016/J.Bpj.2010.03.063 |
0.358 |
|
2010 |
Yan Q, Murphy-Ullrich JE, Song Y. Structural insight into the role of thrombospondin-1 binding to calreticulin in calreticulin-induced focal adhesion disassembly. Biochemistry. 49: 3685-94. PMID 20337411 DOI: 10.1021/Bi902067F |
0.443 |
|
2010 |
Pan D, Yan Q, Chen Y, McDonald JM, Song Y. Abstract 96: Conformational and thermodynamics analyses of the regulation of trifluoperazine on camodulin binding to Fas: Implications for cancer chemotherapy Cancer Research. 70: 96-96. DOI: 10.1158/1538-7445.Am10-96 |
0.45 |
|
2010 |
Pan D, Wilson JT, Chaikof EL, Song Y. Effect of the Conjugation of Peg to the PLL on the Micro- and Mesoscopic Properties of a POPC Bilayer Biophysical Journal. 98. DOI: 10.1016/J.Bpj.2009.12.513 |
0.319 |
|
2009 |
Pan D, Yan Q, Song Y. Effect of Trifluoperazine on Ca2+ -Bound Calmodulin binding to Fas Death Domain for DISC Formation Biophysical Journal. 96. DOI: 10.1016/J.Bpj.2008.12.3064 |
0.444 |
|
2008 |
Suever JD, Chen Y, McDonald JM, Song Y. Conformation and free energy analyses of the complex of calcium-bound calmodulin and the Fas death domain. Biophysical Journal. 95: 5913-21. PMID 18820240 DOI: 10.1529/Biophysj.108.130542 |
0.429 |
|
2008 |
Liu Y, Pan D, Bellis SL, Song Y. Effect of altered glycosylation on the structure of the I-like domain of beta1 integrin: a molecular dynamics study. Proteins. 73: 989-1000. PMID 18536010 DOI: 10.1002/Prot.22126 |
0.352 |
|
2008 |
Lee SJ, Song Y, Baker NA. Molecular dynamics simulations of asymmetric NaCl and KCl solutions separated by phosphatidylcholine bilayers: potential drops and structural changes induced by strong Na+-lipid interactions and finite size effects. Biophysical Journal. 94: 3565-76. PMID 18222999 DOI: 10.1529/Biophysj.107.116335 |
0.327 |
|
2005 |
Song Y, Guallar V, Baker NA. Molecular dynamics simulations of salicylate effects on the micro- and mesoscopic properties of a dipalmitoylphosphatidylcholine bilayer. Biochemistry. 44: 13425-38. PMID 16216066 DOI: 10.1021/Bi0506829 |
0.335 |
|
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