Trinity L. Hamilton - Publications

Affiliations: 
2012-2014 Plant & Microbial Biology University of Minnesota, Twin Cities, Minneapolis, MN 

63 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Kees ED, Murugapiran SK, Bennett AC, Hamilton TL. Distribution and Genomic Variation of Thermophilic Cyanobacteria in Diverse Microbial Mats at the Upper Temperature Limits of Photosynthesis. Msystems. e0031722. PMID 35980085 DOI: 10.1128/msystems.00317-22  0.301
2022 Bennett AC, Murugapiran SK, Kees ED, Sauer HM, Hamilton TL. Temperature and Geographic Location Impact the Distribution and Diversity of Photoautotrophic Gene Variants in Alkaline Yellowstone Hot Springs. Microbiology Spectrum. e0146521. PMID 35575591 DOI: 10.1128/spectrum.01465-21  0.331
2021 Grettenberger CL, Hamilton TL. Metagenome assembled genomes of novel taxa from an acid mine drainage environment. Applied and Environmental Microbiology. AEM0077221. PMID 34161177 DOI: 10.1128/AEM.00772-21  0.786
2020 Berberich ME, Beaulieu JJ, Hamilton TL, Waldo S, Buffam I. Spatial variability of sediment methane production and methanogen communities within a eutrophic reservoir: Importance of organic matter source and quantity. Limnology and Oceanography. 65: 1-23. PMID 32801395 DOI: 10.1002/Lno.11392  0.357
2020 Bennett AC, Murugapiran SK, Hamilton TL. Temperature impacts community structure and function of phototrophic Chloroflexi and Cyanobacteria in two alkaline hot springs in Yellowstone National Park. Environmental Microbiology Reports. PMID 32613733 DOI: 10.1111/1758-2229.12863  0.345
2020 Lentz DL, Hamilton TL, Dunning NP, Scarborough VL, Luxton TP, Vonderheide A, Tepe EJ, Perfetta CJ, Brunemann J, Grazioso L, Valdez F, Tankersley KB, Weiss AA. Molecular genetic and geochemical assays reveal severe contamination of drinking water reservoirs at the ancient Maya city of Tikal. Scientific Reports. 10: 10316. PMID 32587274 DOI: 10.1038/S41598-020-67044-Z  0.342
2020 Grettenberger CL, Havig JR, Hamilton TL. Metabolic diversity and co-occurrence of multiple Ferrovum species at an acid mine drainage site. Bmc Microbiology. 20: 119. PMID 32423375 DOI: 10.1186/S12866-020-01768-W  0.755
2020 Hamilton TL, Corman JR, Havig JR. Carbon and nitrogen recycling during cyanoHABs in dreissenid-invaded and non-invaded US midwestern lakes and reservoirs Hydrobiologia. 847: 939-965. DOI: 10.1007/S10750-019-04157-1  0.411
2019 Havig JR, Hamilton TL. Productivity and Community Composition of Low Biomass/High Silica Precipitation Hot Springs: A Possible Window to Earth's Early Biosphere? Life (Basel, Switzerland). 9. PMID 31362401 DOI: 10.3390/Life9030064  0.437
2019 Hamilton TL. The trouble with oxygen: The ecophysiology of extant phototrophs and implications for the evolution of oxygenic photosynthesis. Free Radical Biology & Medicine. PMID 31078729 DOI: 10.1016/J.Freeradbiomed.2019.05.003  0.363
2019 Havig JR, Hamilton TL. Hypolithic Photosynthesis in Hydrothermal Areas and Implications for Cryptic Oxygen Oases on Archean Continental Surfaces Frontiers in Earth Science. 7: 15. DOI: 10.3389/Feart.2019.00015  0.363
2019 Havig JR, Hamilton TL. Snow algae drive productivity and weathering at volcanic rock-hosted glaciers Geochimica Et Cosmochimica Acta. 247: 220-242. DOI: 10.1016/J.Gca.2018.12.024  0.421
2019 Holmes CJ, Jennings EC, Gantz JD, Spacht D, Spangler AA, Denlinger DL, Lee RE, Hamilton TL, Benoit JB. The Antarctic mite, Alaskozetes antarcticus, shares bacterial microbiome community membership but not abundance between adults and tritonymphs Polar Biology. 42: 2075-2085. DOI: 10.1007/S00300-019-02582-5  0.381
2018 Haas S, de Beer D, Klatt JM, Fink A, Rench RM, Hamilton TL, Meyer V, Kakuk B, Macalady JL. Low-Light Anoxygenic Photosynthesis and Fe-S-Biogeochemistry in a Microbial Mat. Frontiers in Microbiology. 9: 858. PMID 29755448 DOI: 10.3389/Fmicb.2018.00858  0.701
2018 Hamilton TL, Havig JR. Inorganic carbon addition stimulates snow algae primary productivity. The Isme Journal. PMID 29379176 DOI: 10.1038/S41396-018-0048-6  0.305
2018 Hamilton TL, Klatt JM, de Beer D, Macalady JL. Cyanobacterial photosynthesis under sulfidic conditions: insights from the isolate Leptolyngbya sp. strain hensonii. The Isme Journal. PMID 29328062 DOI: 10.1038/Ismej.2017.193  0.681
2018 Rutledge AM, Horgan BHN, Havig JR, Rampe EB, Scudder NA, Hamilton T. Silica Dissolution and Precipitation in Glaciated Volcanic Environments and Implications for Mars Geophysical Research Letters. 45: 7371-7381. DOI: 10.1029/2018Gl078105  0.301
2018 Mitchell ME, Hamilton T, Uebel-Niemeier C, Hopfensperger KN, Buffam I. Nitrogen cycling players and processes in green roof ecosystems Applied Soil Ecology. 132: 114-125. DOI: 10.1016/J.Apsoil.2018.08.007  0.341
2017 Hamilton TL, Welander PV, Albrecht HL, Fulton JM, Schaperdoth I, Bird LR, Summons RE, Freeman KH, Macalady JL. Microbial communities and organic biomarkers in a Proterozoic-analog sinkhole. Geobiology. 15: 784-797. PMID 29035021 DOI: 10.1111/Gbi.12252  0.696
2017 Colman DR, Poudel S, Hamilton TL, Havig JR, Selensky MJ, Shock EL, Boyd ES. Geobiological feedbacks and the evolution of thermoacidophiles. The Isme Journal. PMID 29028004 DOI: 10.1038/Ismej.2017.162  0.634
2017 Therien JB, Artz JH, Poudel S, Hamilton TL, Liu Z, Noone SM, Adams MWW, King PW, Bryant DA, Boyd ES, Peters JW. The Physiological Functions and Structural Determinants of Catalytic Bias in the [FeFe]-Hydrogenases CpI and CpII of Clostridium pasteurianum Strain W5. Frontiers in Microbiology. 8: 1305. PMID 28747909 DOI: 10.3389/Fmicb.2017.01305  0.71
2017 Thiel V, Tank M, Tomsho LP, Burhans R, Gay SE, Hamilton TL, Schuster SC, Bryant DA. Draft Genome Sequence of Anoxybacillusayderensis Strain MT-Cab (Firmicutes). Genome Announcements. 5. PMID 28663291 DOI: 10.1128/Genomea.00547-17  0.32
2017 Hotaling S, Hood E, Hamilton TL. Microbial ecology of mountain glacier ecosystems: Biodiversity, ecological connections, and implications of a warming climate. Environmental Microbiology. PMID 28419666 DOI: 10.1111/1462-2920.13766  0.345
2017 Boyd ES, Yu RQ, Barkay T, Hamilton TL, Baxter BK, Naftz DL, Marvin-DiPasquale M. Effect of salinity on mercury methylating benthic microbes and their activities in Great Salt Lake, Utah. The Science of the Total Environment. PMID 28057343 DOI: 10.1016/J.Scitotenv.2016.12.157  0.577
2017 Schuler CG, Havig JR, Hamilton TL. Hot Spring Microbial Community Composition, Morphology, and Carbon Fixation: Implications for Interpreting the Ancient Rock Record Frontiers in Earth Science. 5: 97. DOI: 10.3389/Feart.2017.00097  0.427
2017 Havig JR, Hamilton TL, Bachan A, Kump LR. Sulfur and carbon isotopic evidence for metabolic pathway evolution and a four-stepped Earth system progression across the Archean and Paleoproterozoic Earth-Science Reviews. 174: 1-21. DOI: 10.1016/J.Earscirev.2017.06.014  0.392
2017 Havig JR, Hamilton TL, McCormick M, McClure B, Sowers T, Wegter B, Kump LR. Water column and sediment stable carbon isotope biogeochemistry of permanently redox-stratified Fayetteville Green Lake, New York, U.S.A. Limnology and Oceanography. 63: 570-587. DOI: 10.1002/Lno.10649  0.39
2017 Havig JR, Grettenberger C, Hamilton TL. Geochemistry and microbial community composition across a range of acid mine drainage impact and implications for the Neoarchean-Paleoproterozoic transition† Journal of Geophysical Research. 122: 1404-1422. DOI: 10.1002/2016Jg003594  0.785
2016 de Beer D, Weber M, Chennu A, Hamilton T, Lott C, Macalady J, Klatt J. Oxygenic and anoxygenic photosynthesis in a microbial mat from an anoxic and sulfidic spring. Environmental Microbiology. PMID 28035767 DOI: 10.1111/1462-2920.13654  0.67
2016 Hamilton TL, Havig J. Primary productivity of snow algae communities on stratovolcanoes of the Pacific Northwest. Geobiology. PMID 27917584 DOI: 10.1111/Gbi.12219  0.442
2016 Hamilton TL, Bovee RJ, Sattin SR, Mohr W, Gilhooly WP, Lyons TW, Pearson A, Macalady JL. Carbon and Sulfur Cycling below the Chemocline in a Meromictic Lake and the Identification of a Novel Taxonomic Lineage in the FCB Superphylum, Candidatus Aegiribacteria. Frontiers in Microbiology. 7: 598. PMID 27199928 DOI: 10.3389/Fmicb.2016.00598  0.739
2016 Urschel MR, Hamilton TL, Roden EE, Boyd ES. Substrate Preference, Uptake Kinetics, and Bioenergetics in a Facultatively Autotrophic, Thermoacidophilic Crenarchaeote. Fems Microbiology Ecology. PMID 27037359 DOI: 10.1093/Femsec/Fiw069  0.622
2015 Harrold ZR, Skidmore ML, Hamilton TL, Desch L, Amada K, van Gelder W, Glover K, Roden EE, Boyd ES. Aerobic and Anaerobic Thiosulfate Oxidation by a Cold-Adapted, Subglacial Chemoautotroph. Applied and Environmental Microbiology. PMID 26712544 DOI: 10.1128/Aem.03398-15  0.653
2015 Hamilton TL, Bryant DA, Macalady JL. The role of biology in planetary evolution: cyanobacterial primary production in low oxygen Proterozoic oceans. Environmental Microbiology. PMID 26549614 DOI: 10.1111/1462-2920.13118  0.7
2015 Mansor M, Hamilton TL, Fantle MS, Macalady JL. Metabolic diversity and ecological niches of Achromatium populations revealed with single-cell genomic sequencing. Frontiers in Microbiology. 6: 822. PMID 26322031 DOI: 10.3389/Fmicb.2015.00822  0.781
2015 Lincoln SA, Hamilton TL, Valladares Juárez AG, Schedler M, Macalady JL, Müller R, Freeman KH. Draft Genome Sequence of the Piezotolerant and Crude Oil-Degrading Bacterium Rhodococcus qingshengii Strain TUHH-12. Genome Announcements. 3. PMID 25858843 DOI: 10.1128/Genomea.00268-15  0.641
2015 Boyd ES, Costas AM, Hamilton TL, Mus F, Peters JW. Evolution of molybdenum nitrogenase during the transition from anaerobic to aerobic metabolism. Journal of Bacteriology. 197: 1690-9. PMID 25733617 DOI: 10.1128/Jb.02611-14  0.699
2015 Telling J, Boyd ES, Bone N, Jones EL, Tranter M, MacFarlane JW, Martin PG, Wadham JL, Lamarche-Gagnon G, Skidmore ML, Hamilton TL, Hill E, Jackson M, Hodgson DA. Erratum: Rock comminution as a source of hydrogen for subglacial ecosystems Nature Geoscience. 8: 981-981. DOI: 10.1038/Ngeo2604  0.518
2015 Telling J, Boyd ES, Bone N, Jones EL, Tranter M, Macfarlane JW, Martin PG, Wadham JL, Lamarche-Gagnon G, Skidmore ML, Hamilton TL, Hill E, Jackson M, Hodgson DA. Rock comminution as a source of hydrogen for subglacial ecosystems Nature Geoscience. 8: 851-855. DOI: 10.1038/Ngeo2533  0.585
2015 Havig JR, McCormick ML, Hamilton TL, Kump LR. The behavior of biologically important trace elements across the oxic/euxinic transition of meromictic Fayetteville Green Lake, New York, USA Geochimica Et Cosmochimica Acta. 165: 389-406. DOI: 10.1016/J.Gca.2015.06.024  0.353
2014 Hamilton TL, Jones DS, Schaperdoth I, Macalady JL. Metagenomic insights into S(0) precipitation in a terrestrial subsurface lithoautotrophic ecosystem. Frontiers in Microbiology. 5: 756. PMID 25620962 DOI: 10.3389/Fmicb.2014.00756  0.763
2014 Boyd ES, Hamilton TL, Swanson KD, Howells AE, Baxter BK, Meuser JE, Posewitz MC, Peters JW. [FeFe]-hydrogenase abundance and diversity along a vertical redox gradient in Great Salt Lake, USA. International Journal of Molecular Sciences. 15: 21947-66. PMID 25464382 DOI: 10.3390/Ijms151221947  0.708
2014 Thiel V, Hamilton TL, Tomsho LP, Burhans R, Gay SE, Schuster SC, Ward DM, Bryant DA. Draft Genome Sequence of a Sulfide-Oxidizing, Autotrophic Filamentous Anoxygenic Phototrophic Bacterium, Chloroflexus sp. Strain MS-G (Chloroflexi). Genome Announcements. 2. PMID 25189583 DOI: 10.1128/Genomea.00872-14  0.336
2014 Thiel V, Hamilton TL, Tomsho LP, Burhans R, Gay SE, Ramaley RF, Schuster SC, Steinke L, Bryant DA. Draft Genome Sequence of the Moderately Thermophilic Bacterium Schleiferia thermophila Strain Yellowstone (Bacteroidetes). Genome Announcements. 2. PMID 25169864 DOI: 10.1128/Genomea.00860-14  0.324
2014 Boyd ES, Hamilton TL, Havig JR, Skidmore ML, Shock EL. Chemolithotrophic primary production in a subglacial ecosystem. Applied and Environmental Microbiology. 80: 6146-53. PMID 25085483 DOI: 10.1128/Aem.01956-14  0.658
2014 Hamilton TL, Bovee RJ, Thiel V, Sattin SR, Mohr W, Schaperdoth I, Vogl K, Gilhooly WP, Lyons TW, Tomsho LP, Schuster SC, Overmann J, Bryant DA, Pearson A, Macalady JL. Coupled reductive and oxidative sulfur cycling in the phototrophic plate of a meromictic lake. Geobiology. 12: 451-68. PMID 24976102 DOI: 10.1111/Gbi.12092  0.723
2014 Hamilton TL, Koonce E, Howells A, Havig JR, Jewell T, de la Torre JR, Peters JW, Boyd ES. Competition for ammonia influences the structure of chemotrophic communities in geothermal springs. Applied and Environmental Microbiology. 80: 653-61. PMID 24242238 DOI: 10.1128/Aem.02577-13  0.715
2013 Macalady JL, Hamilton TL, Grettenberger CL, Jones DS, Tsao LE, Burgos WD. Energy, ecology and the distribution of microbial life. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 368: 20120383. PMID 23754819 DOI: 10.1098/Rstb.2012.0383  0.762
2013 Boyd ES, Hamilton TL, Wang J, He L, Zhang CL. The role of tetraether lipid composition in the adaptation of thermophilic archaea to acidity. Frontiers in Microbiology. 4: 62. PMID 23565112 DOI: 10.3389/Fmicb.2013.00062  0.566
2013 Hamilton TL, Peters JW, Skidmore ML, Boyd ES. Molecular evidence for an active endogenous microbiome beneath glacial ice. The Isme Journal. 7: 1402-12. PMID 23486249 DOI: 10.1038/Ismej.2013.31  0.713
2012 Duffus BR, Hamilton TL, Shepard EM, Boyd ES, Peters JW, Broderick JB. Radical AdoMet enzymes in complex metal cluster biosynthesis. Biochimica Et Biophysica Acta. 1824: 1254-63. PMID 22269887 DOI: 10.1016/J.Bbapap.2012.01.002  0.668
2012 Hamilton TL, Vogl K, Bryant DA, Boyd ES, Peters JW. Environmental constraints defining the distribution, composition, and evolution of chlorophototrophs in thermal features of Yellowstone National Park Geobiology. 10: 236-249. PMID 21955797 DOI: 10.1111/J.1472-4669.2011.00296.X  0.634
2011 Boyd ES, Hamilton TL, Peters JW. An alternative path for the evolution of biological nitrogen fixation. Frontiers in Microbiology. 2: 205. PMID 22065963 DOI: 10.3389/Fmicb.2011.00205  0.685
2011 Hamilton TL, Jacobson M, Ludwig M, Boyd ES, Bryant DA, Dean DR, Peters JW. Differential accumulation of nif structural gene mRNA in Azotobacter vinelandii. Journal of Bacteriology. 193: 4534-6. PMID 21725008 DOI: 10.1128/Jb.05100-11  0.708
2011 Hamilton TL, Ludwig M, Dixon R, Boyd ES, Dos Santos PC, Setubal JC, Bryant DA, Dean DR, Peters JW. Transcriptional profiling of nitrogen fixation in Azotobacter vinelandii. Journal of Bacteriology. 193: 4477-86. PMID 21724999 DOI: 10.1128/Jb.05099-11  0.749
2011 Boyd ES, Lange RK, Mitchell AC, Havig JR, Hamilton TL, Lafrenière MJ, Shock EL, Peters JW, Skidmore M. Diversity, abundance, and potential activity of nitrifying and nitrate-reducing microbial assemblages in a subglacial ecosystem. Applied and Environmental Microbiology. 77: 4778-87. PMID 21622799 DOI: 10.1128/Aem.00376-11  0.721
2011 Boyd ES, Anbar AD, Miller S, Hamilton TL, Lavin M, Peters JW. A late methanogen origin for molybdenum-dependent nitrogenase Geobiology. 9: 221-232. PMID 21504537 DOI: 10.1111/J.1472-4669.2011.00278.X  0.628
2011 Hamilton TL, Lange RK, Boyd ES, Peters JW. Biological nitrogen fixation in acidic high-temperature geothermal springs in Yellowstone National Park, Wyoming. Environmental Microbiology. 13: 2204-15. PMID 21450003 DOI: 10.1111/J.1462-2920.2011.02475.X  0.701
2011 Hamilton TL, Boyd ES, Peters JW. Environmental constraints underpin the distribution and phylogenetic diversity of nifH in the Yellowstone geothermal complex. Microbial Ecology. 61: 860-70. PMID 21365232 DOI: 10.1007/S00248-011-9824-9  0.71
2011 Boyd JM, Endrizzi JA, Hamilton TL, Christopherson MR, Mulder DW, Downs DM, Peters JW. FAD binding by ApbE protein from Salmonella enterica: a new class of FAD-binding proteins. Journal of Bacteriology. 193: 887-95. PMID 21148731 DOI: 10.1128/Jb.00730-10  0.553
2010 Boyd ES, Hamilton TL, Spear JR, Lavin M, Peters JW. [FeFe]-hydrogenase in Yellowstone National Park: evidence for dispersal limitation and phylogenetic niche conservatism. The Isme Journal. 4: 1485-95. PMID 20535223 DOI: 10.1038/Ismej.2010.76  0.71
2008 Sarma R, Barney BM, Hamilton TL, Jones A, Seefeldt LC, Peters JW. Crystal structure of the L protein of Rhodobacter sphaeroides light-independent protochlorophyllide reductase with MgADP bound: a homologue of the nitrogenase Fe protein. Biochemistry. 47: 13004-15. PMID 19006326 DOI: 10.1021/Bi801058R  0.548
2007 Taylor RM, Maaty WS, Lord CI, Hamilton T, Burritt JB, Bothner B, Jesaitis AJ. Cloning, sequence analysis and confirmation of derived gene sequences for three epitope-mapped monoclonal antibodies against human phagocyte flavocytochrome b. Molecular Immunology. 44: 625-37. PMID 16563510 DOI: 10.1016/J.Molimm.2005.10.022  0.313
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