Shixiong Zhang - Publications

Affiliations: 
2017-2020 Computer Science City University of Hong Kong, Kowloon, Hong Kong 

17 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Liu Z, Wong HM, Chen X, Lin J, Zhang S, Yan S, Wang F, Li X, Wong KC. MotifHub: Detection of trans-acting DNA motif group with probabilistic modeling algorithm. Computers in Biology and Medicine. 168: 107753. PMID 38039889 DOI: 10.1016/j.compbiomed.2023.107753  0.597
2023 Lan M, Zhang S, Gao L. Efficient Generation of Paired Single-Cell Multiomics Profiles by Deep Learning. Advanced Science (Weinheim, Baden-Wurttemberg, Germany). e2301169. PMID 37114830 DOI: 10.1002/advs.202301169  0.426
2023 Zhang S, Li X, Lin J, Lin Q, Wong KC. Review of Single-cell RNA-seq Data Clustering for Cell Type Identification and Characterization. Rna (New York, N.Y.). PMID 36737104 DOI: 10.1261/rna.078965.121  0.713
2023 Yu Z, Su Y, Lu Y, Yang Y, Wang F, Zhang S, Chang Y, Wong KC, Li X. Topological identification and interpretation for single-cell gene regulation elucidation across multiple platforms using scMGCA. Nature Communications. 14: 400. PMID 36697410 DOI: 10.1038/s41467-023-36134-7  0.576
2022 Su Y, Wang F, Zhang S, Liang Y, Wong KC, Li X. scWMC: Weighted Matrix Completion-based Imputation of scRNA-seq Data via Prior Subspace Information. Bioinformatics (Oxford, England). PMID 35984287 DOI: 10.1093/bioinformatics/btac570  0.517
2021 Li X, Li S, Huang L, Zhang S, Wong KC. High-throughput single-cell RNA-seq data imputation and characterization with surrogate-assisted automated deep learning. Briefings in Bioinformatics. PMID 34553763 DOI: 10.1093/bib/bbab368  0.599
2021 Lin J, Huang L, Chen X, Zhang S, Wong KC. DeepMotifSyn: a deep learning approach to synthesize heterodimeric DNA motifs. Briefings in Bioinformatics. PMID 34524404 DOI: 10.1093/bib/bbab334  0.717
2021 Yu Z, Bian C, Liu G, Zhang S, Wong KC, Li X. Elucidating transcriptomic profiles from single-cell RNA sequencing data using nature-inspired compressed sensing. Briefings in Bioinformatics. PMID 33855366 DOI: 10.1093/bib/bbab125  0.573
2021 Li X, Zhang S, Wong KC. Deep embedded clustering with multiple objectives on scRNA-seq data. Briefings in Bioinformatics. PMID 33822877 DOI: 10.1093/bib/bbab090  0.557
2020 Li X, Li S, Wang Y, Zhang S, Wong KC. Identification of pan-cancer Ras pathway activation with deep learning. Briefings in Bioinformatics. PMID 33126245 DOI: 10.1093/bib/bbaa258  0.449
2020 Zhang S, Li X, Lin Q, Lin J, Wong KC. Uncovering the key dimensions of high-throughput biomolecular data using deep learning. Nucleic Acids Research. PMID 32232416 DOI: 10.1093/Nar/Gkaa191  0.72
2020 Li X, Zhang S, Wong KC. Evolving Transcriptomic Profiles from Single-cell RNA-seq Data using Nature-Inspired Multiobjective Optimization. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 32031947 DOI: 10.1109/Tcbb.2020.2971993  0.604
2020 Li X, Zhang S, Wong KC. Multiobjective Genome-Wide RNA-Binding Event Identification From CLIP-Seq Data. Ieee Transactions On Cybernetics. PMID 31940583 DOI: 10.1109/Tcyb.2019.2960515  0.601
2019 Zhang S, Li X, Lin Q, Wong KC. Nature-Inspired Compressed Sensing for Transcriptomic Profiling From Random Composite Measurements. Ieee Transactions On Cybernetics. PMID 31751263 DOI: 10.1109/Tcyb.2019.2951402  0.59
2018 Li X, Zhang S, Wong KC. Single-cell RNA-seq Interpretations using Evolutionary Multiobjective Ensemble Pruning. Bioinformatics (Oxford, England). PMID 30596898 DOI: 10.1093/Bioinformatics/Bty1056  0.587
2018 Zhang S, Li X, Lin Q, Wong KC. Synergizing CRISPR/Cas9 Off-Target Predictions for Ensemble Insights and Practical Applications. Bioinformatics (Oxford, England). PMID 30169558 DOI: 10.1093/Bioinformatics/Bty748  0.53
2018 Li X, Zhang S, Wong KC. Nature-Inspired Multiobjective Epistasis Elucidation from Genome-Wide Association Studies. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 29994485 DOI: 10.1109/Tcbb.2018.2849759  0.494
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