| Year |
Citation |
Score |
| 2023 |
Markakiou S, Neves AR, Zeidan AA, Gaspar P. Development of a Tetracycline-Inducible System for Conditional Gene Expression in Lactococcus lactis and Streptococcus thermophilus. Microbiology Spectrum. e0066823. PMID 37191512 DOI: 10.1128/spectrum.00668-23 |
0.701 |
|
| 2022 |
Rau MH, Gaspar P, Jensen ML, Geppel A, Neves AR, Zeidan AA. Genome-Scale Metabolic Modeling Combined with Transcriptome Profiling Provides Mechanistic Understanding of Streptococcus thermophilus CH8 Metabolism. Applied and Environmental Microbiology. e0078022. PMID 35924931 DOI: 10.1128/aem.00780-22 |
0.745 |
|
| 2021 |
Schöpping M, Gaspar P, Neves AR, Franzén CJ, Zeidan AA. Identifying the essential nutritional requirements of the probiotic bacteria Bifidobacterium animalis and Bifidobacterium longum through genome-scale modeling. Npj Systems Biology and Applications. 7: 47. PMID 34887435 DOI: 10.1038/s41540-021-00207-4 |
0.738 |
|
| 2020 |
Siedler S, Rau MH, Bidstrup S, Vento JM, Aunsbjerg SD, Bosma EF, McNair LM, Beisel CL, Neves AR. Competitive exclusion is a major bioprotective mechanism of lactobacilli against fungal spoilage in fermented milk products. Applied and Environmental Microbiology. PMID 32005739 DOI: 10.1128/Aem.02312-19 |
0.404 |
|
| 2020 |
Markakiou S, Gaspar P, Johansen E, Zeidan AA, Neves AR. Harnessing the metabolic potential of Streptococcus thermophilus for new biotechnological applications. Current Opinion in Biotechnology. 61: 142-152. PMID 31945498 DOI: 10.1016/J.Copbio.2019.12.019 |
0.752 |
|
| 2018 |
Siedler S, Balti R, Neves AR. Bioprotective mechanisms of lactic acid bacteria against fungal spoilage of food. Current Opinion in Biotechnology. 56: 138-146. PMID 30504082 DOI: 10.1016/J.Copbio.2018.11.015 |
0.307 |
|
| 2018 |
Szymczak P, Filipe SR, Covas G, Vogensen FK, Neves AR, Janzen T. Cell wall glycans mediate recognition of the dairy bacterium by bacteriophages. Applied and Environmental Microbiology. PMID 30242010 DOI: 10.1128/Aem.01847-18 |
0.333 |
|
| 2018 |
McNair LKF, Siedler S, Vinther JM, Hansen AM, Neves AR, Garrigues C, Jäger AK, Franzyk H, Staerk D. Identification and characterization of a new antifungal peptide in fermented milk product containing bioprotective Lactobacillus cultures. Fems Yeast Research. PMID 30137293 DOI: 10.1093/Femsyr/Foy094 |
0.309 |
|
| 2018 |
Cardoso JGR, Zeidan AA, Jensen K, Sonnenschein N, Neves AR, Herrgård MJ. MARSI: metabolite analogues for rational strain improvement. Bioinformatics (Oxford, England). 34: 2319-2321. PMID 29949953 DOI: 10.1093/Bioinformatics/Bty108 |
0.416 |
|
| 2018 |
Dudnik A, Gaspar P, Neves AR, Forster J. Engineering of Microbial Cell Factories for the Production of Plant Polyphenols with Health-Beneficial Properties. Current Pharmaceutical Design. PMID 29766793 DOI: 10.2174/1381612824666180515152049 |
0.729 |
|
| 2018 |
Strøman P, Sørensen KI, Derkx PMF, Neves AR. Development of Tyrosine Decarboxylase-Negative Strains of Lactobacillus curvatus by Classical Strain Improvement. Journal of Food Protection. 81: 628-635. PMID 29543528 DOI: 10.4315/0362-028X.Jfp-17-301 |
0.396 |
|
| 2017 |
Zeidan AA, Poulsen VK, Janzen T, Buldo P, Derkx PMF, Øregaard G, Neves AR. Polysaccharide production by lactic acid bacteria: from genes to industrial applications. Fems Microbiology Reviews. 41: S168-S200. PMID 28830087 DOI: 10.1093/Femsre/Fux017 |
0.378 |
|
| 2017 |
Dudnik A, Almeida AF, Andrade R, Avila B, Bañados P, Barbay D, Bassard J, Benkoulouche M, Bott M, Braga A, Breitel D, Brennan R, Bulteau L, Chanforan C, Costa I, ... ... Neves AR, et al. BacHBerry: BACterial Hosts for production of Bioactive phenolics from bERRY fruits Phytochemistry Reviews. 17: 291-326. DOI: 10.1007/S11101-017-9532-2 |
0.717 |
|
| 2016 |
Szymczak P, Janzen T, Neves AR, Kot W, Hansen LH, Lametsch R, Neve H, Franz CM, Vogensen FK. Novel variants of Streptococcus thermophilus bacteriophages indicate genetic recombination across phages from different bacterial species. Applied and Environmental Microbiology. PMID 28039135 DOI: 10.1128/Aem.02748-16 |
0.329 |
|
| 2016 |
Radoš D, Turner DL, Catarino T, Hoffart E, Neves AR, Eikmanns BJ, Blombach B, Santos H. Stereospecificity of Corynebacterium glutamicum 2,3-butanediol dehydrogenase and implications for the stereochemical purity of bioproduced 2,3-butanediol. Applied Microbiology and Biotechnology. PMID 27687994 DOI: 10.1007/S00253-016-7860-6 |
0.727 |
|
| 2015 |
Radoš D, Carvalho AL, Wieschalka S, Neves AR, Blombach B, Eikmanns BJ, Santos H. Engineering Corynebacterium glutamicum for the production of 2,3-butanediol. Microbial Cell Factories. 14: 171. PMID 26511723 DOI: 10.1186/S12934-015-0362-X |
0.773 |
|
| 2015 |
Paixão L, Caldas J, Kloosterman TG, Kuipers OP, Vinga S, Neves AR. Transcriptional and metabolic effects of glucose on Streptococcus pneumoniae sugar metabolism. Frontiers in Microbiology. 6: 1041. PMID 26500614 DOI: 10.3389/Fmicb.2015.01041 |
0.478 |
|
| 2015 |
Stahlhut SG, Siedler S, Malla S, Harrison SJ, Maury J, Neves AR, Forster J. Assembly of a novel biosynthetic pathway for production of the plant flavonoid fisetin in Escherichia coli. Metabolic Engineering. 31: 84-93. PMID 26192693 DOI: 10.1016/J.Ymben.2015.07.002 |
0.36 |
|
| 2015 |
Paixão L, Oliveira J, Veríssimo A, Vinga S, Lourenço EC, Ventura MR, Kjos M, Veening JW, Fernandes VE, Andrew PW, Yesilkaya H, Neves AR. Host glycan sugar-specific pathways in Streptococcus pneumonia: galactose as a key sugar in colonisation and infection. Plos One. 10: e0121042. PMID 25826206 DOI: 10.1371/Journal.Pone.0121042 |
0.786 |
|
| 2014 |
Gaspar P, Al-Bayati FA, Andrew PW, Neves AR, Yesilkaya H. Lactate dehydrogenase is the key enzyme for pneumococcal pyruvate metabolism and pneumococcal survival in blood. Infection and Immunity. 82: 5099-109. PMID 25245810 DOI: 10.1128/Iai.02005-14 |
0.774 |
|
| 2014 |
Radoš D, Turner DL, Fonseca LL, Carvalho AL, Blombach B, Eikmanns BJ, Neves AR, Santos H. Carbon flux analysis by 13C nuclear magnetic resonance to determine the effect of CO2 on anaerobic succinate production by Corynebacterium glutamicum. Applied and Environmental Microbiology. 80: 3015-24. PMID 24610842 DOI: 10.1128/Aem.04189-13 |
0.79 |
|
| 2014 |
Costa RS, Hartmann A, Gaspar P, Neves AR, Vinga S. An extended dynamic model of Lactococcus lactis metabolism for mannitol and 2,3-butanediol production. Molecular Biosystems. 10: 628-39. PMID 24413179 DOI: 10.1039/C3Mb70265K |
0.768 |
|
| 2014 |
Siedler S, Stahlhut SG, Malla S, Maury J, Neves AR. Novel biosensors based on flavonoid-responsive transcriptional regulators introduced into Escherichia coli. Metabolic Engineering. 21: 2-8. PMID 24188962 DOI: 10.1016/J.Ymben.2013.10.011 |
0.355 |
|
| 2013 |
Nogly P, Matias PM, de Rosa M, Castro R, Santos H, Neves AR, Archer M. High-resolution structure of an atypical α-phosphoglucomutase related to eukaryotic phosphomannomutases. Acta Crystallographica. Section D, Biological Crystallography. 69: 2008-16. PMID 24100319 DOI: 10.1107/S0907444913017046 |
0.736 |
|
| 2013 |
González-RodrÃguez I, Gaspar P, Sánchez B, Gueimonde M, Margolles A, Neves AR. Catabolism of glucose and lactose in Bifidobacterium animalis subsp. lactis, studied by 13C Nuclear Magnetic Resonance. Applied and Environmental Microbiology. 79: 7628-38. PMID 24077711 DOI: 10.1128/Aem.02529-13 |
0.769 |
|
| 2013 |
Carvalho AL, Turner DL, Fonseca LL, Solopova A, Catarino T, Kuipers OP, Voit EO, Neves AR, Santos H. Metabolic and transcriptional analysis of acid stress in Lactococcus lactis, with a focus on the kinetics of lactic acid pools. Plos One. 8: e68470. PMID 23844205 DOI: 10.1371/Journal.Pone.0068470 |
0.703 |
|
| 2013 |
Carvalho SM, Farshchi Andisi V, Gradstedt H, Neef J, Kuipers OP, Neves AR, Bijlsma JJ. Pyruvate oxidase influences the sugar utilization pattern and capsule production in Streptococcus pneumoniae. Plos One. 8: e68277. PMID 23844180 DOI: 10.1371/Journal.Pone.0068277 |
0.483 |
|
| 2013 |
Gaspar P, Carvalho AL, Vinga S, Santos H, Neves AR. From physiology to systems metabolic engineering for the production of biochemicals by lactic acid bacteria. Biotechnology Advances. 31: 764-88. PMID 23567148 DOI: 10.1016/J.Biotechadv.2013.03.011 |
0.747 |
|
| 2013 |
Carvalho SM, Kuipers OP, Neves AR. Environmental and nutritional factors that affect growth and metabolism of the pneumococcal serotype 2 strain D39 and its nonencapsulated derivative strain R6. Plos One. 8: e58492. PMID 23505518 DOI: 10.1371/Journal.Pone.0058492 |
0.44 |
|
| 2013 |
Ferreira MT, Manso AS, Gaspar P, Pinho MG, Neves AR. Effect of oxygen on glucose metabolism: utilization of lactate in Staphylococcus aureus as revealed by in vivo NMR studies. Plos One. 8: e58277. PMID 23472168 DOI: 10.1371/Journal.Pone.0058277 |
0.753 |
|
| 2013 |
Nogly P, Castro R, de Rosa M, Neves AR, Santos H, Archer M. Production and crystallization of α-phosphoglucomutase fromLactococcus lactis. Corrigendum Acta Crystallographica Section F Structural Biology and Crystallization Communications. 69: 1313-1313. DOI: 10.1107/S1744309113029126 |
0.7 |
|
| 2012 |
Nogly P, Castro R, de Rosa M, Neves AR, Santos H, Archer M. Production and crystallization of α-phosphoglucomutase from Lactococcus lactis. Acta Crystallographica. Section F, Structural Biology and Crystallization Communications. 68: 1113-5. PMID 22949208 DOI: 10.1107/S1744309112032629 |
0.745 |
|
| 2012 |
Solopova A, Bachmann H, Teusink B, Kok J, Neves AR, Kuipers OP. A specific mutation in the promoter region of the silent cel cluster accounts for the appearance of lactose-utilizing Lactococcus lactis MG1363. Applied and Environmental Microbiology. 78: 5612-21. PMID 22660716 DOI: 10.1128/Aem.00455-12 |
0.313 |
|
| 2011 |
Carvalho SM, Kloosterman TG, Kuipers OP, Neves AR. CcpA ensures optimal metabolic fitness of Streptococcus pneumoniae. Plos One. 6: e26707. PMID 22039538 DOI: 10.1371/Journal.Pone.0026707 |
0.466 |
|
| 2011 |
Campelo AB, Gaspar P, Roces C, RodrÃguez A, Kok J, Kuipers OP, Neves AR, MartÃnez B. The Lcn972 bacteriocin-encoding plasmid pBL1 impairs cellobiose metabolism in Lactococcus lactis. Applied and Environmental Microbiology. 77: 7576-85. PMID 21890668 DOI: 10.1128/Aem.06107-11 |
0.763 |
|
| 2011 |
Gaspar P, Neves AR, Gasson MJ, Shearman CA, Santos H. High yields of 2,3-butanediol and mannitol in Lactococcus lactis through engineering of NAD⺠cofactor recycling. Applied and Environmental Microbiology. 77: 6826-35. PMID 21841021 DOI: 10.1128/Aem.05544-11 |
0.774 |
|
| 2011 |
Carvalho AL, Cardoso FS, Bohn A, Neves AR, Santos H. Engineering trehalose synthesis in Lactococcus lactis for improved stress tolerance. Applied and Environmental Microbiology. 77: 4189-99. PMID 21515730 DOI: 10.1128/Aem.02922-10 |
0.498 |
|
| 2010 |
Vinga S, Neves AR, Santos H, Brandt BW, Kooijman SA. Subcellular metabolic organization in the context of dynamic energy budget and biochemical systems theories. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 365: 3429-42. PMID 20921043 DOI: 10.1098/Rstb.2010.0156 |
0.433 |
|
| 2010 |
Neves AR, Pool WA, Solopova A, Kok J, Santos H, Kuipers OP. Towards enhanced galactose utilization by Lactococcus lactis. Applied and Environmental Microbiology. 76: 7048-60. PMID 20817811 DOI: 10.1128/Aem.01195-10 |
0.577 |
|
| 2009 |
Yesilkaya H, Spissu F, Carvalho SM, Terra VS, Homer KA, Benisty R, Porat N, Neves AR, Andrew PW. Pyruvate formate lyase is required for pneumococcal fermentative metabolism and virulence. Infection and Immunity. 77: 5418-27. PMID 19752030 DOI: 10.1128/Iai.00178-09 |
0.425 |
|
| 2009 |
Castro R, Neves AR, Fonseca LL, Pool WA, Kok J, Kuipers OP, Santos H. Characterization of the individual glucose uptake systems of Lactococcus lactis: Mannose-PTS, cellobiose-PTS and the novel GlcU permease Molecular Microbiology. 71: 795-806. PMID 19054326 DOI: 10.1111/J.1365-2958.2008.06564.X |
0.773 |
|
| 2008 |
Andersen AZ, Carvalho AL, Neves AR, Santos H, Kummer U, Olsen LF. The metabolic pH response in Lactococcus lactis: an integrative experimental and modelling approach. Computational Biology and Chemistry. 33: 71-83. PMID 18829387 DOI: 10.1016/J.Compbiolchem.2008.08.001 |
0.444 |
|
| 2008 |
Fonseca C, Neves AR, Antunes AM, Noronha JP, Hahn-Hägerdal B, Santos H, Spencer-Martins I. Use of in vivo 13C nuclear magnetic resonance spectroscopy to elucidate L-arabinose metabolism in yeasts. Applied and Environmental Microbiology. 74: 1845-55. PMID 18245253 DOI: 10.1128/Aem.02453-07 |
0.47 |
|
| 2008 |
Sánchez C, Neves AR, Cavalheiro J, dos Santos MM, García-Quintáns N, López P, Santos H. Contribution of citrate metabolism to the growth of Lactococcus lactis CRL264 at low pH. Applied and Environmental Microbiology. 74: 1136-44. PMID 18156322 DOI: 10.1128/Aem.01061-07 |
0.557 |
|
| 2007 |
Gaspar P, Neves AR, Shearman CA, Gasson MJ, Baptista AM, Turner DL, Soares CM, Santos H. The lactate dehydrogenases encoded by the ldh and ldhB genes in Lactococcus lactis exhibit distinct regulation and catalytic properties - comparative modeling to probe the molecular basis. The Febs Journal. 274: 5924-36. PMID 17944947 DOI: 10.1111/J.1742-4658.2007.06115.X |
0.755 |
|
| 2006 |
Voit EO, Almeida J, Marino S, Lall R, Goel G, Neves AR, Santos H. Regulation of glycolysis in Lactococcus lactis: an unfinished systems biological case study. Systems Biology. 153: 286-98. PMID 16986630 DOI: 10.1049/ip-syb:20050087 |
0.375 |
|
| 2006 |
Neves AR, Pool WA, Castro R, Mingote A, Santos F, Kok J, Kuipers OP, Santos H. The α-phosphoglucomutase of Lactococcus lactis is unrelated to the α-D-phosphohexomutase superfamily and is encoded by the essential gene pgmH Journal of Biological Chemistry. 281: 36864-36873. PMID 16980299 DOI: 10.1074/Jbc.M607044200 |
0.752 |
|
| 2006 |
Pool WA, Neves AR, Kok J, Santos H, Kuipers OP. Natural sweetening of food products by engineering Lactococcus lactis for glucose production. Metabolic Engineering. 8: 456-64. PMID 16844396 DOI: 10.1016/J.Ymben.2006.05.003 |
0.583 |
|
| 2006 |
Voit E, Neves AR, Santos H. The intricate side of systems biology. Proceedings of the National Academy of Sciences of the United States of America. 103: 9452-7. PMID 16766654 DOI: 10.1073/Pnas.0603337103 |
0.45 |
|
| 2005 |
Neves AR, Pool WA, Kok J, Kuipers OP, Santos H. Overview on sugar metabolism and its control in Lactococcus lactis - the input from in vivo NMR. Fems Microbiology Reviews. 29: 531-54. PMID 15939503 DOI: 10.1016/J.Femsre.2005.04.005 |
0.525 |
|
| 2004 |
Ramos A, Neves AR, Ventura R, Maycock C, López P, Santos H. Effect of pyruvate kinase overproduction on glucose metabolism of Lactococcus lactis. Microbiology (Reading, England). 150: 1103-1111. PMID 15073320 DOI: 10.1099/Mic.0.26695-0 |
0.679 |
|
| 2004 |
Gaspar P, Neves AR, Ramos A, Gasson MJ, Shearman CA, Santos H. Engineering Lactococcus lactis for production of mannitol: high yields from food-grade strains deficient in lactate dehydrogenase and the mannitol transport system. Applied and Environmental Microbiology. 70: 1466-74. PMID 15006767 DOI: 10.1128/Aem.70.3.1466-1474.2004 |
0.805 |
|
| 2003 |
Anderson RM, Latorre-Esteves M, Neves AR, Lavu S, Medvedik O, Taylor C, Howitz KT, Santos H, Sinclair DA. Yeast life-span extension by calorie restriction is independent of NAD fluctuation. Science (New York, N.Y.). 302: 2124-6. PMID 14605207 DOI: 10.1126/Science.1088697 |
0.397 |
|
| 2003 |
Neves AR, Ramos A, Costa H, van Swam II, Hugenholtz J, Kleerebezem M, de Vos W, Santos H. Effect of different NADH oxidase levels on glucose metabolism by Lactococcus lactis: kinetics of intracellular metabolite pools determined by in vivo nuclear magnetic resonance. Applied and Environmental Microbiology. 68: 6332-42. PMID 12450858 DOI: 10.1128/Aem.68.12.6332-6342.2002 |
0.658 |
|
| 2003 |
Neves AR, Ramos A, Shearman C, Gasson MJ, Santos H. Catabolism of mannitol in Lactococcus lactis MG1363 and a mutant defective in lactate dehydrogenase. Microbiology (Reading, England). 148: 3467-3476. PMID 12427938 DOI: 10.1099/00221287-148-11-3467 |
0.659 |
|
| 2002 |
Ramos A, Neves AR, Santos H. Metabolism of lactic acid bacteria studied by nuclear magnetic resonance. Antonie Van Leeuwenhoek. 82: 249-61. PMID 12369191 DOI: 10.1007/978-94-017-2029-8_15 |
0.622 |
|
| 2002 |
Neves AR, Ventura R, Mansour N, Shearman C, Gasson MJ, Maycock C, Ramos A, Santos H. Is the glycolytic flux in Lactococcus lactis primarily controlled by the redox charge? Kinetics of NAD(+) and NADH pools determined in vivo by 13C NMR. The Journal of Biological Chemistry. 277: 28088-98. PMID 12011086 DOI: 10.1074/Jbc.M202573200 |
0.659 |
|
| 2002 |
Ramos A, Neves AR, Santos H. Antonie Van Leeuwenhoek. 82: 249-261. DOI: 10.1023/A:1020664422633 |
0.476 |
|
| 2000 |
Neves AR, Ramos A, Shearman C, Gasson MJ, Almeida JS, Santos H. Metabolic characterization of Lactococcus lactis deficient in lactate dehydrogenase using in vivo 13C-NMR. European Journal of Biochemistry. 267: 3859-68. PMID 10849005 DOI: 10.1046/J.1432-1327.2000.01424.X |
0.692 |
|
| 1999 |
Neves AR, Ramos A, Nunes MC, Kleerebezem M, Hugenholtz J, de Vos WM, Almeida J, Santos H. In vivo nuclear magnetic resonance studies of glycolytic kinetics in Lactococcus lactis. Biotechnology and Bioengineering. 64: 200-12. PMID 10397856 DOI: 10.1002/(Sici)1097-0290(19990720)64:2<200::Aid-Bit9>3.0.Co;2-K |
0.652 |
|
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