| Year |
Citation |
Score |
| 2024 |
Chen LL, Ingolia NT, Insco ML, Li JB, Oberdoerffer S, Weeks KM. Voices: Challenges and opportunities in RNA biology. Cell Chemical Biology. 31: 10-13. PMID 38242091 DOI: 10.1016/j.chembiol.2023.12.015 |
0.303 |
|
| 2023 |
Hu SB, Heraud-Farlow J, Sun T, Liang Z, Goradia A, Taylor S, Walkley CR, Li JB. ADAR1p150 prevents MDA5 and PKR activation via distinct mechanisms to avert fatal autoinflammation. Molecular Cell. PMID 37797622 DOI: 10.1016/j.molcel.2023.09.018 |
0.302 |
|
| 2023 |
Datta R, Adamska JZ, Bhate A, Li JB. A-to-I RNA editing by ADAR and its therapeutic applications: From viral infections to cancer immunotherapy. Wiley Interdisciplinary Reviews. Rna. e1817. PMID 37718249 DOI: 10.1002/wrna.1817 |
0.307 |
|
| 2020 |
Freund EC, Sapiro AL, Li Q, Linder S, Moresco JJ, Yates JR, Li JB. Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing. Cell Reports. 31: 107656. PMID 32433965 DOI: 10.1016/J.Celrep.2020.107656 |
0.427 |
|
| 2020 |
Sapiro AL, Freund EC, Restrepo L, Qiao HH, Bhate A, Li Q, Ni JQ, Mosca TJ, Li JB. Zinc Finger RNA-Binding Protein Zn72D Regulates ADAR-Mediated RNA Editing in Neurons. Cell Reports. 31: 107654. PMID 32433963 DOI: 10.1016/J.Celrep.2020.107654 |
0.426 |
|
| 2020 |
Deng P, Khan A, Jacobson D, Sambrani N, McGurk L, Li X, Jayasree A, Hejatko J, Shohat-Ophir G, O'Connell MA, Li JB, Keegan LP. Adar RNA editing-dependent and -independent effects are required for brain and innate immune functions in Drosophila. Nature Communications. 11: 1580. PMID 32221286 DOI: 10.1038/S41467-020-15435-1 |
0.391 |
|
| 2019 |
Breen MS, Dobbyn A, Li Q, Roussos P, Hoffman GE, Stahl E, Chess A, Sklar P, Li JB, Devlin B, Buxbaum JD. Global landscape and genetic regulation of RNA editing in cortical samples from individuals with schizophrenia. Nature Neuroscience. 22: 1402-1412. PMID 31455887 DOI: 10.1016/J.Euroneuro.2019.07.236 |
0.384 |
|
| 2019 |
Merkle T, Merz S, Reautschnig P, Blaha A, Li Q, Vogel P, Wettengel J, Li JB, Stafforst T. Precise RNA editing by recruiting endogenous ADARs with antisense oligonucleotides. Nature Biotechnology. 37: 133-138. PMID 30692694 DOI: 10.1038/S41587-019-0013-6 |
0.449 |
|
| 2018 |
Zaidan H, Ramaswami G, Barak M, Li JB, Gaisler-Salomon I. Pre-reproductive stress and fluoxetine treatment in rats affect offspring A-to-I RNA editing, gene expression and social behavior. Environmental Epigenetics. 4: dvy021. PMID 30109132 DOI: 10.1093/Eep/Dvy021 |
0.34 |
|
| 2018 |
Yesselman JD, Tian S, Liu X, Shi L, Li JB, Das R. Updates to the RNA mapping database (RMDB), version 2. Nucleic Acids Research. 46: D375-D379. PMID 30053264 DOI: 10.1093/Nar/Gkx873 |
0.367 |
|
| 2018 |
Vogel P, Moschref M, Li Q, Merkle T, Selvasaravanan KD, Li JB, Stafforst T. Efficient and precise editing of endogenous transcripts with SNAP-tagged ADARs. Nature Methods. 15: 535-538. PMID 29967493 DOI: 10.1038/S41592-018-0017-Z |
0.424 |
|
| 2018 |
Zaidan H, Ramaswami G, Golumbic YN, Sher N, Malik A, Barak M, Galiani D, Dekel N, Li JB, Gaisler-Salomon I. A-to-I RNA editing in the rat brain is age-dependent, region-specific and sensitive to environmental stress across generations. Bmc Genomics. 19: 28. PMID 29310578 DOI: 10.1186/S12864-017-4409-8 |
0.364 |
|
| 2017 |
Yablonovitch AL, Deng P, Jacobson D, Li JB. The evolution and adaptation of A-to-I RNA editing. Plos Genetics. 13: e1007064. PMID 29182635 DOI: 10.1371/Journal.Pgen.1007064 |
0.45 |
|
| 2017 |
Yablonovitch AL, Fu J, Li K, Mahato S, Kang L, Rashkovetsky E, Korol AB, Tang H, Michalak P, Zelhof AC, Nevo E, Li JB. Regulation of gene expression and RNA editing in Drosophila adapting to divergent microclimates. Nature Communications. 8: 1570. PMID 29146998 DOI: 10.1038/S41467-017-01658-2 |
0.382 |
|
| 2017 |
Walkley CR, Li JB. Rewriting the transcriptome: adenosine-to-inosine RNA editing by ADARs. Genome Biology. 18: 205. PMID 29084589 DOI: 10.1186/S13059-017-1347-3 |
0.408 |
|
| 2017 |
Tan MH, Li Q, Shanmugam R, Piskol R, Kohler J, Young AN, Liu KI, Zhang R, Ramaswami G, Ariyoshi K, Gupte A, Keegan LP, George CX, Ramu A, Huang N, ... ... Li JB, et al. Dynamic landscape and regulation of RNA editing in mammals. Nature. 550: 249-254. PMID 29022589 DOI: 10.1038/Nature24041 |
0.428 |
|
| 2017 |
Heraud-Farlow JE, Chalk AM, Linder SE, Li Q, Taylor S, White JM, Pang L, Liddicoat BJ, Gupte A, Li JB, Walkley CR. Protein recoding by ADAR1-mediated RNA editing is not essential for normal development and homeostasis. Genome Biology. 18: 166. PMID 28874170 DOI: 10.1186/S13059-017-1301-4 |
0.385 |
|
| 2017 |
Lumb JH, Li Q, Popov LM, Ding S, Keith MT, Merrill BD, Greenberg HB, Li JB, Carette JE. DDX6 Represses Aberrant Activation of Interferon-Stimulated Genes. Cell Reports. 20: 819-831. PMID 28746868 DOI: 10.1016/J.Celrep.2017.06.085 |
0.39 |
|
| 2017 |
Zhang R, Deng P, Jacobson D, Li JB. Evolutionary analysis reveals regulatory and functional landscape of coding and non-coding RNA editing. Plos Genetics. 13: e1006563. PMID 28166241 DOI: 10.1371/Journal.Pgen.1006563 |
0.429 |
|
| 2016 |
Liddicoat BJ, Hartner JC, Piskol R, Ramaswami G, Chalk AM, Kingsley PD, Sankaran VG, Wall M, Purton LE, Seeburg PH, Palis J, Orkin SH, Lu J, Li JB, Walkley CR. Adenosine-to-insoine RNA editing by ADAR1 is essential for normal murine erythropoiesis. Experimental Hematology. PMID 27373493 DOI: 10.1016/J.Exphem.2016.06.250 |
0.419 |
|
| 2016 |
Ramaswami G, Li JB. Identification of human RNA editing sites: a historical perspective. Methods (San Diego, Calif.). PMID 27208508 DOI: 10.1016/J.Ymeth.2016.05.011 |
0.445 |
|
| 2016 |
Reid CD, Karra K, Chang J, Piskol R, Li Q, Li JB, Cherry JM, Baker JC. XenMine: A genomic interaction tool for the Xenopus community. Developmental Biology. PMID 27157655 DOI: 10.1016/J.Ydbio.2016.02.034 |
0.343 |
|
| 2016 |
George CX, Ramaswami G, Li JB, Samuel CE. Editing of cellular self RNAs by adenosine deaminase ADAR1 suppresses innate immune stress responses. The Journal of Biological Chemistry. PMID 26817845 DOI: 10.1074/Jbc.M115.709014 |
0.401 |
|
| 2015 |
Han L, Diao L, Yu S, Xu X, Li J, Zhang R, Yang Y, Werner HM, Eterovic AK, Yuan Y, Li J, Nair N, Minelli R, Tsang YH, Cheung LW, ... ... Li JB, et al. The Genomic Landscape and Clinical Relevance of A-to-I RNA Editing in Human Cancers. Cancer Cell. PMID 26439496 DOI: 10.1016/J.Ccell.2015.08.013 |
0.428 |
|
| 2015 |
Liddicoat BJ, Piskol R, Chalk AM, Ramaswami G, Higuchi M, Hartner JC, Li JB, Seeburg PH, Walkley CR. RNA editing by ADAR1 prevents MDA5 sensing of endogenous dsRNA as nonself. Science (New York, N.Y.). 349: 1115-20. PMID 26275108 DOI: 10.1126/Science.Aac7049 |
0.437 |
|
| 2015 |
Rivas MA, Pirinen M, Conrad DF, Lek M, Tsang EK, Karczewski KJ, Maller JB, Kukurba KR, DeLuca DS, Fromer M, Ferreira PG, Smith KS, Zhang R, Zhao F, Banks E, ... ... Li JB, et al. Human genomics. Effect of predicted protein-truncating genetic variants on the human transcriptome. Science (New York, N.Y.). 348: 666-9. PMID 25954003 DOI: 10.1126/Science.1261877 |
0.323 |
|
| 2015 |
Sapiro AL, Deng P, Zhang R, Li JB. Cis regulatory effects on A-to-I RNA editing in related Drosophila species. Cell Reports. 11: 697-703. PMID 25921533 DOI: 10.1016/J.Celrep.2015.04.005 |
0.39 |
|
| 2015 |
Babak T, DeVeale B, Tsang EK, Zhou Y, Li X, Smith KS, Kukurba KR, Zhang R, Li JB, van der Kooy D, Montgomery SB, Fraser HB. Genetic conflict reflected in tissue-specific maps of genomic imprinting in human and mouse. Nature Genetics. 47: 544-9. PMID 25848752 DOI: 10.1038/Ng.3274 |
0.317 |
|
| 2014 |
Ren X, Yang Z, Xu J, Sun J, Mao D, Hu Y, Yang SJ, Qiao HH, Wang X, Hu Q, Deng P, Liu LP, Ji JY, Li JB, Ni JQ. Enhanced specificity and efficiency of the CRISPR/Cas9 system with optimized sgRNA parameters in Drosophila. Cell Reports. 9: 1151-62. PMID 25437567 DOI: 10.1016/J.Celrep.2014.09.044 |
0.331 |
|
| 2014 |
Satterlee JS, Basanta-Sanchez M, Blanco S, Li JB, Meyer K, Pollock J, Sadri-Vakili G, Rybak-Wolf A. Novel RNA modifications in the nervous system: form and function. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 34: 15170-7. PMID 25392485 DOI: 10.1523/Jneurosci.3236-14.2014 |
0.416 |
|
| 2014 |
Kukurba KR, Zhang R, Li X, Smith KS, Knowles DA, How Tan M, Piskol R, Lek M, Snyder M, Macarthur DG, Li JB, Montgomery SB. Allelic expression of deleterious protein-coding variants across human tissues. Plos Genetics. 10: e1004304. PMID 24786518 DOI: 10.1371/Journal.Pgen.1004304 |
0.348 |
|
| 2014 |
Bazak L, Haviv A, Barak M, Jacob-Hirsch J, Deng P, Zhang R, Isaacs FJ, Rechavi G, Li JB, Eisenberg E, Levanon EY. A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes. Genome Research. 24: 365-76. PMID 24347612 DOI: 10.1101/Gr.164749.113 |
0.456 |
|
| 2014 |
Zhang R, Li X, Ramaswami G, Smith KS, Turecki G, Montgomery SB, Li JB. Quantifying RNA allelic ratios by microfluidic multiplex PCR and sequencing. Nature Methods. 11: 51-4. PMID 24270603 DOI: 10.1038/Nmeth.2736 |
0.426 |
|
| 2014 |
Ramaswami G, Li JB. RADAR: a rigorously annotated database of A-to-I RNA editing. Nucleic Acids Research. 42: D109-13. PMID 24163250 DOI: 10.1093/Nar/Gkt996 |
0.435 |
|
| 2014 |
Liddicoat B, Piskol R, Li JB, Chalk A, Seeburg P, Higuchi M, Walkley C, Hartner J. RNA editing is the primary in vivo function of ADAR1 and is essential for hematopoiesis Experimental Hematology. 42: S17. DOI: 10.1016/J.Exphem.2014.07.058 |
0.406 |
|
| 2013 |
Li JB, Church GM. Deciphering the functions and regulation of brain-enriched A-to-I RNA editing. Nature Neuroscience. 16: 1518-22. PMID 24165678 DOI: 10.1038/Nn.3539 |
0.452 |
|
| 2013 |
Piskol R, Ramaswami G, Li JB. Reliable identification of genomic variants from RNA-seq data. American Journal of Human Genetics. 93: 641-51. PMID 24075185 DOI: 10.1016/J.Ajhg.2013.08.008 |
0.442 |
|
| 2013 |
Piskol R, Peng Z, Wang J, Li JB. Lack of evidence for existence of noncanonical RNA editing. Nature Biotechnology. 31: 19-20. PMID 23302925 DOI: 10.1038/Nbt.2472 |
0.409 |
|
| 2013 |
Ramaswami G, Zhang R, Piskol R, Keegan LP, Deng P, O'Connell MA, Li JB. Identifying RNA editing sites using RNA sequencing data alone. Nature Methods. 10: 128-32. PMID 23291724 DOI: 10.1038/Nmeth.2330 |
0.441 |
|
| 2013 |
Tan MH, Au KF, Yablonovitch AL, Wills AE, Chuang J, Baker JC, Wong WH, Li JB. RNA sequencing reveals a diverse and dynamic repertoire of the Xenopus tropicalis transcriptome over development. Genome Research. 23: 201-16. PMID 22960373 DOI: 10.1101/Gr.141424.112 |
0.443 |
|
| 2013 |
Eran A, Li JB, Vatalaro K, McCarthy J, Rahimov F, Collins C, Markianos K, Margulies DM, Brown EN, Calvo SE, Kohane IS, Kunkel LM. Comparative RNA editing in autistic and neurotypical cerebella. Molecular Psychiatry. 18: 1041-8. PMID 22869036 DOI: 10.1038/Mp.2012.118 |
0.398 |
|
| 2013 |
Beliveau BJ, Joyce EF, Apostolopoulosa N, Yilmaza F, Fonseka CY, McCole RB, Chang Y, Li JB, Senaratne TN, Williams BR, Rouillard J, Wu C. Oligopaints: highly efficient, bioinformatically designed probes for fluorescence in situ hybridization Epigenetics & Chromatin. 6. DOI: 10.1186/1756-8935-6-S1-P5 |
0.342 |
|
| 2013 |
Liddicoat B, Piskol R, Chalk A, Higuchi M, Seeburg P, Li JB, Hartner J, Walkley CR. A-To-I RNA Editing By ADAR1 Is Essential For Hematopoiesis Blood. 122: 1199-1199. DOI: 10.1182/Blood.V122.21.1199.1199 |
0.438 |
|
| 2012 |
Bass B, Hundley H, Li JB, Peng Z, Pickrell J, Xiao XG, Yang L. The difficult calls in RNA editing. Interviewed by H Craig Mak. Nature Biotechnology. 30: 1207-9. PMID 23222792 DOI: 10.1038/Nbt.2452 |
0.409 |
|
| 2012 |
Sanjana NE, Levanon EY, Hueske EA, Ambrose JM, Li JB. Activity-dependent A-to-I RNA editing in rat cortical neurons. Genetics. 192: 281-7. PMID 22714409 DOI: 10.1534/Genetics.112.141200 |
0.357 |
|
| 2012 |
Ramaswami G, Lin W, Piskol R, Tan MH, Davis C, Li JB. Accurate identification of human Alu and non-Alu RNA editing sites. Nature Methods. 9: 579-81. PMID 22484847 DOI: 10.1038/Nmeth.1982 |
0.428 |
|
| 2012 |
Lin W, Piskol R, Tan MH, Li JB. Comment on "Widespread RNA and DNA sequence differences in the human transcriptome". Science (New York, N.Y.). 335: 1302; author reply 1. PMID 22422964 DOI: 10.1126/Science.1210624 |
0.382 |
|
| 2010 |
Eisenberg E, Li JB, Levanon EY. Sequence based identification of RNA editing sites. Rna Biology. 7: 248-52. PMID 20215866 DOI: 10.4161/Rna.7.2.11565 |
0.425 |
|
| 2009 |
Lee JH, Park IH, Gao Y, Li JB, Li Z, Daley GQ, Zhang K, Church GM. A robust approach to identifying tissue-specific gene expression regulatory variants using personalized human induced pluripotent stem cells. Plos Genetics. 5: e1000718. PMID 19911041 DOI: 10.1371/Journal.Pgen.1000718 |
0.326 |
|
| 2009 |
Zhang K, Li JB, Gao Y, Egli D, Xie B, Deng J, Li Z, Lee JH, Aach J, Leproust EM, Eggan K, Church GM. Digital RNA allelotyping reveals tissue-specific and allele-specific gene expression in human. Nature Methods. 6: 613-8. PMID 19620972 DOI: 10.1038/Nmeth.1357 |
0.355 |
|
| 2009 |
Li JB, Gao Y, Aach J, Zhang K, Kryukov GV, Xie B, Ahlford A, Yoon JK, Rosenbaum AM, Zaranek AW, LeProust E, Sunyaev SR, Church GM. Multiplex padlock targeted sequencing reveals human hypermutable CpG variations. Genome Research. 19: 1606-15. PMID 19525355 DOI: 10.1101/Gr.092213.109 |
0.308 |
|
| 2009 |
Li JB, Levanon EY, Yoon JK, Aach J, Xie B, Leproust E, Zhang K, Gao Y, Church GM. Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing. Science (New York, N.Y.). 324: 1210-3. PMID 19478186 DOI: 10.1126/Science.1170995 |
0.455 |
|
| 2009 |
Ball MP, Li JB, Gao Y, Lee JH, LeProust EM, Park IH, Xie B, Daley GQ, Church GM. Targeted and genome-scale strategies reveal gene-body methylation signatures in human cells. Nature Biotechnology. 27: 361-8. PMID 19329998 DOI: 10.1038/Nbt.1533 |
0.306 |
|
| 2007 |
Porreca GJ, Zhang K, Li JB, Xie B, Austin D, Vassallo SL, LeProust EM, Peck BJ, Emig CJ, Dahl F, Gao Y, Church GM, Shendure J. Multiplex amplification of large sets of human exons. Nature Methods. 4: 931-6. PMID 17934468 DOI: 10.1038/Nmeth1110 |
0.303 |
|
| 2003 |
Li JB, Lin S, Jia H, Wu H, Roe BA, Kulp D, Stormo GD, Dutcher SK. Analysis of Chlamydomonas reinhardtii genome structure using large-scale sequencing of regions on linkage groups I and III. The Journal of Eukaryotic Microbiology. 50: 145-55. PMID 12836870 DOI: 10.1111/J.1550-7408.2003.Tb00109.X |
0.312 |
|
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