| Year |
Citation |
Score |
| 2017 |
Vetrivel I, Mahajan S, Tyagi M, Hoffmann L, Sanejouand YH, Srinivasan N, de Brevern AG, Cadet F, Offmann B. Knowledge-based prediction of protein backbone conformation using a structural alphabet. Plos One. 12: e0186215. PMID 29161266 DOI: 10.1371/Journal.Pone.0186215 |
0.741 |
|
| 2013 |
Nishi H, Tyagi M, Teng S, Shoemaker BA, Hashimoto K, Alexov E, Wuchty S, Panchenko AR. Cancer missense mutations alter binding properties of proteins and their interaction networks. Plos One. 8: e66273. PMID 23799087 DOI: 10.1371/Journal.Pone.0066273 |
0.767 |
|
| 2012 |
Tyagi M, Thangudu RR, Zhang D, Bryant SH, Madej T, Panchenko AR. Homology inference of protein-protein interactions via conserved binding sites. Plos One. 7: e28896. PMID 22303436 DOI: 10.1371/Journal.Pone.0028896 |
0.828 |
|
| 2012 |
Tyagi M, Hashimoto K, Shoemaker BA, Wuchty S, Panchenko AR. Large-scale mapping of human protein interactome using structural complexes. Embo Reports. 13: 266-71. PMID 22261719 DOI: 10.1038/Embor.2011.261 |
0.78 |
|
| 2012 |
Shoemaker BA, Zhang D, Tyagi M, Thangudu RR, Fong JH, Marchler-Bauer A, Bryant SH, Madej T, Panchenko AR. IBIS (Inferred Biomolecular Interaction Server) reports, predicts and integrates multiple types of conserved interactions for proteins. Nucleic Acids Research. 40: D834-40. PMID 22102591 DOI: 10.1093/Nar/Gkr997 |
0.814 |
|
| 2010 |
Joseph AP, Agarwal G, Mahajan S, Gelly JC, Swapna LS, Offmann B, Cadet F, Bornot A, Tyagi M, Valadié H, Schneider B, Etchebest C, Srinivasan N, De Brevern AG. A short survey on protein blocks. Biophysical Reviews. 2: 137-147. PMID 21731588 DOI: 10.1007/S12551-010-0036-1 |
0.799 |
|
| 2010 |
Thangudu RR, Tyagi M, Shoemaker BA, Bryant SH, Panchenko AR, Madej T. Knowledge-based annotation of small molecule binding sites in proteins. Bmc Bioinformatics. 11: 365. PMID 20594344 DOI: 10.1186/1471-2105-11-365 |
0.802 |
|
| 2010 |
Shoemaker BA, Zhang D, Thangudu RR, Tyagi M, Fong JH, Marchler-Bauer A, Bryant SH, Madej T, Panchenko AR. Inferred Biomolecular Interaction Server--a web server to analyze and predict protein interacting partners and binding sites. Nucleic Acids Research. 38: D518-24. PMID 19843613 DOI: 10.1093/Nar/Gkp842 |
0.815 |
|
| 2010 |
Tyagi M, Thangudu RR, Shoemaker BA, Bryant SH, Madej T, Panchenko AR. Inferring protein-protein interactions based on conservation of interfaces in homologs F1000research. 1. DOI: 10.7490/F1000Research.254.1 |
0.809 |
|
| 2009 |
Tyagi M, Bornot A, Offmann B, de Brevern AG. Protein short loop prediction in terms of a structural alphabet. Computational Biology and Chemistry. 33: 329-33. PMID 19625218 DOI: 10.1016/J.Compbiolchem.2009.06.002 |
0.775 |
|
| 2009 |
Tyagi M, Bornot A, Offmann B, de Brevern AG. Analysis of loop boundaries using different local structure assignment methods. Protein Science : a Publication of the Protein Society. 18: 1869-81. PMID 19606500 DOI: 10.1002/Pro.198 |
0.734 |
|
| 2009 |
Tyagi M, Shoemaker BA, Bryant SH, Panchenko AR. Exploring functional roles of multibinding protein interfaces. Protein Science : a Publication of the Protein Society. 18: 1674-83. PMID 19591200 DOI: 10.1002/Pro.181 |
0.717 |
|
| 2008 |
Tyagi M, de Brevern AG, Srinivasan N, Offmann B. Protein structure mining using a structural alphabet. Proteins. 71: 920-37. PMID 18004784 DOI: 10.1002/Prot.21776 |
0.785 |
|
| 2007 |
Offmann B, Tyagi M, Brevern AGd. Local Protein Structures Current Bioinformatics. 2: 165-202. DOI: 10.2174/157489307781662105 |
0.801 |
|
| 2006 |
Tyagi M, Gowri VS, Srinivasan N, de Brevern AG, Offmann B. A substitution matrix for structural alphabet based on structural alignment of homologous proteins and its applications. Proteins. 65: 32-9. PMID 16894618 DOI: 10.1002/Prot.21087 |
0.793 |
|
| 2006 |
Tyagi M, Sharma P, Swamy CS, Cadet F, Srinivasan N, de Brevern AG, Offmann B. Protein Block Expert (PBE): a web-based protein structure analysis server using a structural alphabet. Nucleic Acids Research. 34: W119-23. PMID 16844973 DOI: 10.1093/Nar/Gkl199 |
0.834 |
|
| 2005 |
Bansal SK, Kathayat R, Tyagi M, Taneja KK, Basir SF. Phospholipid metabolism and protein kinase C mediated protein phosphorylation in dietary protein deficiency in rat lung. Indian Journal of Experimental Biology. 43: 606-13. PMID 16053266 |
0.304 |
|
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