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Paul A. Jensen - Publications

Affiliations: 
Bioengineering University of Illinois, Urbana-Champaign, Urbana-Champaign, IL 
 2008-2013 Biomedical Engineering University of Virginia, Charlottesville, VA 
Website:
http://jensenlab.net/
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12 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Thibault D, Jensen PA, Wood S, Qabar C, Clark S, Shainheit MG, Isberg RR, van Opijnen T. Droplet Tn-Seq combines microfluidics with Tn-Seq for identifying complex single-cell phenotypes. Nature Communications. 10: 5729. PMID 31844066 DOI: 10.1038/S41467-019-13719-9  0.312
2019 Jijakli K, Jensen PA. Metabolic Modeling of Streptococcus mutans Reveals Complex Nutrient Requirements of an Oral Pathogen. Msystems. 4. PMID 31662430 DOI: 10.1128/mSystems.00529-19  0.335
2019 Shields RC, Jensen PA. The bare necessities: Uncovering essential and condition-critical genes with transposon sequencing. Molecular Oral Microbiology. 34: 39-50. PMID 30739386 DOI: 10.1111/Omi.12256  0.366
2018 Jensen PA. Coupling Fluxes, Enzymes, and Regulation in Genome-Scale Metabolic Models. Methods in Molecular Biology (Clifton, N.J.). 1716: 337-351. PMID 29222761 DOI: 10.1007/978-1-4939-7528-0_15  0.433
2017 Jensen PA. Hands-On Assembly of DNA Sequencing Reads as a Gateway to Bioinformatics. Journal of Microbiology & Biology Education. 18. PMID 28861132 DOI: 10.1128/Jmbe.V18I2.1295  0.304
2017 Jensen PA, Zhu Z, van Opijnen T. Antibiotics Disrupt Coordination between Transcriptional and Phenotypic Stress Responses in Pathogenic Bacteria. Cell Reports. 20: 1705-1716. PMID 28813680 DOI: 10.1016/J.Celrep.2017.07.062  0.343
2015 Jensen PA, Dougherty BV, Moutinho TJ, Papin JA. Miniaturized plate readers for low-cost, high-throughput phenotypic screening. Journal of Laboratory Automation. 20: 51-5. PMID 25366331 DOI: 10.1177/2211068214555414  0.491
2014 Jensen PA, Papin JA. MetDraw: automated visualization of genome-scale metabolic network reconstructions and high-throughput data. Bioinformatics (Oxford, England). 30: 1327-8. PMID 24413519 DOI: 10.1093/Bioinformatics/Btt758  0.576
2012 Chavali AK, Blazier AS, Tlaxca JL, Jensen PA, Pearson RD, Papin JA. Metabolic network analysis predicts efficacy of FDA-approved drugs targeting the causative agent of a neglected tropical disease. Bmc Systems Biology. 6: 27. PMID 22540944 DOI: 10.1186/1752-0509-6-27  0.548
2011 Jensen PA, Lutz KA, Papin JA. TIGER: Toolbox for integrating genome-scale metabolic models, expression data, and transcriptional regulatory networks. Bmc Systems Biology. 5: 147. PMID 21943338 DOI: 10.1186/1752-0509-5-147  0.602
2011 Jensen PA, Papin JA. Functional integration of a metabolic network model and expression data without arbitrary thresholding. Bioinformatics (Oxford, England). 27: 541-7. PMID 21172910 DOI: 10.1093/Bioinformatics/Btq702  0.585
2009 Jensen PA, Papin JA. A scalable systems analysis approach for regulated metabolic networks. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2009: 5464-5. PMID 19964682 DOI: 10.1109/IEMBS.2009.5334060  0.561
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