| Year |
Citation |
Score |
| 2024 |
Li H, Zhang L, Li J, Wu Q, Qian L, He J, Ni Y, Kovatcheva-Datchary P, Yuan R, Liu S, Shen L, Zhang M, Sheng B, Li P, Kang K, ... ... Panagiotou G, et al. Resistant starch intake facilitates weight loss in humans by reshaping the gut microbiota. Nature Metabolism. PMID 38409604 DOI: 10.1038/s42255-024-00988-y |
0.555 |
|
| 2021 |
Barber AE, Sae-Ong T, Kang K, Seelbinder B, Li J, Walther G, Panagiotou G, Kurzai O. Aspergillus fumigatus pan-genome analysis identifies genetic variants associated with human infection. Nature Microbiology. 6: 1526-1536. PMID 34819642 DOI: 10.1038/s41564-021-00993-x |
0.596 |
|
| 2021 |
Kang K, Imamovic L, Misiakou MA, Bornakke Sørensen M, Heshiki Y, Ni Y, Zheng T, Li J, Ellabaan MMH, Colomer-Lluch M, Rode AA, Bytzer P, Panagiotou G, Sommer MOA. Expansion and persistence of antibiotic-specific resistance genes following antibiotic treatment. Gut Microbes. 13: 1-19. PMID 33779498 DOI: 10.1080/19490976.2021.1900995 |
0.588 |
|
| 2020 |
Barber AE, Riedel J, Sae-Ong T, Kang K, Brabetz W, Panagiotou G, Deising HB, Kurzai O. Effects of Agricultural Fungicide Use on Aspergillus fumigatus Abundance, Antifungal Susceptibility, and Population Structure. Mbio. 11. PMID 33234685 DOI: 10.1128/mBio.02213-20 |
0.584 |
|
| 2020 |
Seelbinder B, Chen J, Brunke S, Vazquez-Uribe R, Santhaman R, Meyer AC, de Oliveira Lino FS, Chan KF, Loos D, Imamovic L, Tsang CC, Lam RP, Sridhar S, Kang K, Hube B, ... ... Panagiotou G, et al. Antibiotics create a shift from mutualism to competition in human gut communities with a longer-lasting impact on fungi than bacteria. Microbiome. 8: 133. PMID 32919472 DOI: 10.1186/S40168-020-00899-6 |
0.618 |
|
| 2020 |
Çakır T, Panagiotou G, Uddin R, Durmuş S. Novel Approaches for Systems Biology of Metabolism-Oriented Pathogen-Human Interactions: A Mini-Review. Frontiers in Cellular and Infection Microbiology. 10: 52. PMID 32117818 DOI: 10.3389/Fcimb.2020.00052 |
0.371 |
|
| 2020 |
Haange SB, Jehmlich N, Krügel U, Hintschich C, Wehrmann D, Hankir M, Seyfried F, Froment J, Hübschmann T, Müller S, Wissenbach DK, Kang K, Buettner C, Panagiotou G, Noll M, et al. Gastric bypass surgery in a rat model alters the community structure and functional composition of the intestinal microbiota independently of weight loss. Microbiome. 8: 13. PMID 32033593 DOI: 10.1186/S40168-020-0788-1 |
0.573 |
|
| 2019 |
Chen J, McIlroy SE, Archana A, Baker DM, Panagiotou G. A pollution gradient contributes to the taxonomic, functional, and resistome diversity of microbial communities in marine sediments. Microbiome. 7: 104. PMID 31307536 DOI: 10.1186/S40168-019-0714-6 |
0.303 |
|
| 2019 |
Li J, Rettedal EA, van der Helm E, Ellabaan M, Panagiotou G, Sommer MOA. Antibiotic Treatment Drives the Diversification of the Human Gut Resistome. Genomics, Proteomics & Bioinformatics. PMID 31026582 DOI: 10.1016/J.Gpb.2018.12.003 |
0.373 |
|
| 2019 |
Zheng T, Li J, Ni Y, Kang K, Misiakou MA, Imamovic L, Chow BKC, Rode AA, Bytzer P, Sommer M, Panagiotou G. Mining, analyzing, and integrating viral signals from metagenomic data. Microbiome. 7: 42. PMID 30890181 DOI: 10.1186/S40168-019-0657-Y |
0.598 |
|
| 2019 |
Kang K, Bergdahl B, Machado D, Dato L, Han TL, Li J, Villas-Boas S, Herrgård MJ, Förster J, Panagiotou G. Linking genetic, metabolic and phenotypic diversity among S. cerevisiae strains using multi-omics associations. Gigascience. PMID 30715293 DOI: 10.1093/Gigascience/Giz015 |
0.719 |
|
| 2018 |
Kang K, Ni Y, Li J, Imamovic L, Sarkar C, Kobler MD, Heshiki Y, Zheng T, Kumari S, Wong JCY, Archna A, Wong CWM, Dingle C, Denizen S, Baker DM, ... ... Panagiotou G, et al. The Environmental Exposures and Inner- and Intercity Traffic Flows of the Metro System May Contribute to the Skin Microbiome and Resistome. Cell Reports. 24: 1190-1202.e5. PMID 30067975 DOI: 10.1016/J.Celrep.2018.06.109 |
0.605 |
|
| 2018 |
Lau SKP, Teng JLL, Chiu TH, Chan E, Tsang AKL, Panagiotou G, Zhai SL, Woo PCY. Differential Microbial Communities of Omnivorous and Herbivorous Cattle in Southern China. Computational and Structural Biotechnology Journal. 16: 54-60. PMID 29686799 DOI: 10.1016/J.Csbj.2018.02.004 |
0.332 |
|
| 2018 |
Imamovic L, Misiakou M, Helm Evd, Panagiotou G, Muniesa M, Sommer MOA. Complete Genome Sequence of Escherichia coli Strain WG5 Genome Announcements. 6. PMID 29326209 DOI: 10.1128/Genomea.01403-17 |
0.315 |
|
| 2017 |
Heshiki Y, Dissanayake T, Zheng T, Kang K, Yueqiong N, Xu Z, Sarkar C, Woo PCY, Chow BKC, Baker D, Yan A, Webster CJ, Panagiotou G, Li J. Toward a Metagenomic Understanding on the Bacterial Composition and Resistome in Hong Kong Banknotes. Frontiers in Microbiology. 8: 632. PMID 28450856 DOI: 10.3389/Fmicb.2017.00632 |
0.633 |
|
| 2016 |
Ni Y, Li J, Panagiotou G. COMAN: a web server for comprehensive metatranscriptomics analysis. Bmc Genomics. 17: 622. PMID 27515514 DOI: 10.1186/S12864-016-2964-Z |
0.314 |
|
| 2016 |
Liang C, Cheng S, Zhang Y, Sun Y, Fernie AR, Kang K, Panagiotou G, Lo C, Lim BL. Transcriptomic, proteomic and metabolic changes in Arabidopsis thaliana leaves after the onset of illumination. Bmc Plant Biology. 16: 43. PMID 26865323 DOI: 10.1186/S12870-016-0726-3 |
0.597 |
|
| 2015 |
Ni Y, Li J, Panagiotou G. A Molecular-Level Landscape of Diet-Gut Microbiome Interactions: Toward Dietary Interventions Targeting Bacterial Genes. Mbio. 6. PMID 26507230 DOI: 10.1128/Mbio.01263-15 |
0.369 |
|
| 2015 |
Kang K, Li J, Lim BL, Panagiotou G. MESSI: metabolic engineering target selection and best strain identification tool. Database : the Journal of Biological Databases and Curation. 2015. PMID 26255308 DOI: 10.1093/Database/Bav076 |
0.631 |
|
| 2014 |
Panagiotou G. Note from the Research Network of Computational and Structural Biotechnology (RNCSB) Computational and Structural Biotechnology Journal. 10. PMID 25210601 DOI: 10.1016/J.Csbj.2014.05.001 |
0.313 |
|
| 2014 |
Westergaard D, Li J, Jensen K, Kouskoumvekaki I, Panagiotou G. Exploring mechanisms of diet-colon cancer associations through candidate molecular interaction networks. Bmc Genomics. 15: 380. PMID 24886433 DOI: 10.1186/1471-2164-15-380 |
0.301 |
|
| 2013 |
Jacobsen UP, Nielsen HB, Hildebrand F, Raes J, Sicheritz-Ponten T, Kouskoumvekaki I, Panagiotou G. The chemical interactome space between the human host and the genetically defined gut metabotypes. The Isme Journal. 7: 730-42. PMID 23178670 DOI: 10.1038/Ismej.2012.141 |
0.387 |
|
| 2012 |
Jensen K, Plichta D, Panagiotou G, Kouskoumvekaki I. Mapping the genome of Plasmodium falciparum on the drug-like chemical space reveals novel anti-malarial targets and potential drug leads. Molecular Biosystems. 8: 1678-85. PMID 22446744 DOI: 10.1039/C2Mb00008C |
0.311 |
|
| 2012 |
Herrgard M, Panagiotou G. Analyzing the genomic variation of microbial cell factories in the era of "New Biotechnology" Computational and Structural Biotechnology Journal. 3. DOI: 10.5936/Csbj.201210012 |
0.351 |
|
| 2011 |
Madsen KM, Udatha GD, Semba S, Otero JM, Koetter P, Nielsen J, Ebizuka Y, Kushiro T, Panagiotou G. Linking genotype and phenotype of Saccharomyces cerevisiae strains reveals metabolic engineering targets and leads to triterpene hyper-producers. Plos One. 6: e14763. PMID 21445244 DOI: 10.1371/Journal.Pone.0014763 |
0.458 |
|
| 2011 |
Kouskoumvekaki I, Panagiotou G. Navigating the human metabolome for biomarker identification and design of pharmaceutical molecules. Journal of Biomedicine & Biotechnology. 2011. PMID 20936122 DOI: 10.1155/2011/525497 |
0.344 |
|
| 2011 |
Udatha DB, Kouskoumvekaki I, Olsson L, Panagiotou G. The interplay of descriptor-based computational analysis with pharmacophore modeling builds the basis for a novel classification scheme for feruloyl esterases. Biotechnology Advances. 29: 94-110. PMID 20851174 DOI: 10.1016/J.Biotechadv.2010.09.003 |
0.305 |
|
| 2010 |
Otero JM, Papadakis MA, Udatha DB, Nielsen J, Panagiotou G. Yeast biological networks unfold the interplay of antioxidants, genome and phenotype, and reveal a novel regulator of the oxidative stress response. Plos One. 5: e13606. PMID 21049050 DOI: 10.1371/Journal.Pone.0013606 |
0.398 |
|
| 2010 |
Olivares-Hernández R, Sunner H, Frisvad JC, Olsson L, Nielsen J, Panagiotou G. Combining substrate specificity analysis with support vector classifiers reveals feruloyl esterase as a phylogenetically informative protein group. Plos One. 5: e12781. PMID 20877647 DOI: 10.1371/Journal.Pone.0012781 |
0.407 |
|
| 2009 |
Salazar M, Vongsangnak W, Panagiotou G, Andersen MR, Nielsen J. Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data analysis. Molecular Genetics and Genomics : Mgg. 282: 571-86. PMID 19784673 DOI: 10.1007/S00438-009-0486-Y |
0.447 |
|
| 2009 |
Panagiotou G, Nielsen J. Nutritional systems biology: definitions and approaches. Annual Review of Nutrition. 29: 329-39. PMID 19575602 DOI: 10.1146/Annurev-Nutr-080508-141138 |
0.448 |
|
| 2009 |
Panagiotou G, Andersen MR, Grotkjaer T, Regueira TB, Nielsen J, Olsson L. Studies of the production of fungal polyketides in Aspergillus nidulans by using systems biology tools. Applied and Environmental Microbiology. 75: 2212-20. PMID 19168657 DOI: 10.1128/Aem.01461-08 |
0.468 |
|
| 2009 |
Panagiotou G, Grotkjaer T, Hofmann G, Bapat PM, Olsson L. Overexpression of a novel endogenous NADH kinase in Aspergillus nidulans enhances growth. Metabolic Engineering. 11: 31-9. PMID 18840540 DOI: 10.1016/J.Ymben.2008.08.008 |
0.337 |
|
| 2008 |
Panagiotou G, Andersen MR, Grotkjaer T, Regueira TB, Hofmann G, Nielsen J, Olsson L. Systems analysis unfolds the relationship between the phosphoketolase pathway and growth in Aspergillus nidulans. Plos One. 3: e3847. PMID 19052639 DOI: 10.1371/Journal.Pone.0003847 |
0.432 |
|
| 2008 |
Andersen MR, Vongsangnak W, Panagiotou G, Salazar MP, Lehmann L, Nielsen J. A trispecies Aspergillus microarray: comparative transcriptomics of three Aspergillus species. Proceedings of the National Academy of Sciences of the United States of America. 105: 4387-92. PMID 18332432 DOI: 10.1073/Pnas.0709964105 |
0.432 |
|
| 2008 |
Kouskoumvekaki I, Yang Z, Jónsdóttir SO, Olsson L, Panagiotou G. Identification of biomarkers for genotyping Aspergilli using non-linear methods for clustering and classification. Bmc Bioinformatics. 9: 59. PMID 18226195 DOI: 10.1186/1471-2105-9-59 |
0.342 |
|
| 2007 |
Otero JM, Panagiotou G, Olsson L. Fueling Industrial Biotechnology Growth with Bioethanol Advances in Biochemical Engineering \/ Biotechnology. 108: 1-40. PMID 17684710 DOI: 10.1007/10_2007_071 |
0.316 |
|
| 2007 |
Meijer SL, Panagiotou G, Olsson L, Nielsen J. Physiological characterization of xylose metabolism in Aspergillus niger under oxygen‐limited conditions Biotechnology and Bioengineering. 98: 462-475. PMID 17335061 DOI: 10.1002/Bit.21397 |
0.432 |
|
| 2007 |
Panagiotou G, Kouskoumvekaki I, Jónsdóttir S, Olsson L. Monitoring novel metabolic pathways using metabolomics and machine learning: induction of the phosphoketolase pathway in Aspergillus nidulans cultivations Metabolomics. 3: 503-516. DOI: 10.1007/S11306-007-0061-7 |
0.319 |
|
| 2006 |
Panagiotou G, Christakopoulos P, Grotkjær T, Olsson L. Engineering of the redox imbalance of Fusarium oxysporum enables anaerobic growth on xylose. Metabolic Engineering. 8: 474-482. PMID 16797196 DOI: 10.1016/J.Ymben.2006.04.004 |
0.325 |
|
| 2005 |
Panagiotou G, Christakopoulos P, Olsson L. The influence of different cultivation conditions on the metabolome of Fusarium oxysporum. Journal of Biotechnology. 118: 304-315. PMID 15996783 DOI: 10.1016/J.Jbiotec.2005.05.004 |
0.312 |
|
| 2005 |
Panagiotou G, Villas-Bôas SG, Christakopoulos P, Nielsen J, Olsson L. Intracellular metabolite profiling of Fusarium oxysporum converting glucose to ethanol. Journal of Biotechnology. 115: 425-434. PMID 15639104 DOI: 10.1016/J.Jbiotec.2004.09.011 |
0.407 |
|
| 2005 |
Panagiotou G, Christakopoulos P, Olsson L. Simultaneous saccharification and fermentation of cellulose by Fusarium oxysporum F3—growth characteristics and metabolite profiling Enzyme and Microbial Technology. 36: 693-699. DOI: 10.1016/J.Enzmictec.2004.12.029 |
0.32 |
|
| 2005 |
Panagiotou G, Christakopoulos P, Villas-Boas SG, Olsson L. Fermentation performance and intracellular metabolite profiling of Fusarium oxysporum cultivated on a glucose–xylose mixture Enzyme and Microbial Technology. 36: 100-106. DOI: 10.1016/J.Enzmictec.2004.07.009 |
0.317 |
|
| Show low-probability matches. |