Year |
Citation |
Score |
2021 |
Sastry AV, Hu A, Heckmann D, Poudel S, Kavvas E, Palsson BO. Independent component analysis recovers consistent regulatory signals from disparate datasets. Plos Computational Biology. 17: e1008647. PMID 33529205 DOI: 10.1371/journal.pcbi.1008647 |
0.766 |
|
2020 |
Heckmann D, Campeau A, Lloyd CJ, Phaneuf PV, Hefner Y, Carrillo-Terrazas M, Feist AM, Gonzalez DJ, Palsson BO. Kinetic profiling of metabolic specialists demonstrates stability and consistency of in vivo enzyme turnover numbers. Proceedings of the National Academy of Sciences of the United States of America. PMID 32873645 DOI: 10.1073/Pnas.2001562117 |
0.735 |
|
2020 |
Phaneuf PV, Yurkovich JT, Heckmann D, Wu M, Sandberg TE, King ZA, Tan J, Palsson BO, Feist AM. Causal mutations from adaptive laboratory evolution are outlined by multiple scales of genome annotations and condition-specificity. Bmc Genomics. 21: 514. PMID 32711472 DOI: 10.1186/S12864-020-06920-4 |
0.701 |
|
2020 |
Kavvas ES, Yang L, Monk JM, Heckmann D, Palsson BO. A biochemically-interpretable machine learning classifier for microbial GWAS. Nature Communications. 11: 2580. PMID 32444610 DOI: 10.1038/S41467-020-16310-9 |
0.667 |
|
2020 |
Mih N, Monk JM, Fang X, Catoiu E, Heckmann D, Yang L, Palsson BO. Adaptations of Escherichia coli strains to oxidative stress are reflected in properties of their structural proteomes. Bmc Bioinformatics. 21: 162. PMID 32349661 DOI: 10.1186/S12859-020-3505-Y |
0.768 |
|
2019 |
Yang L, Mih N, Anand A, Park JH, Tan J, Yurkovich JT, Monk JM, Lloyd CJ, Sandberg TE, Seo SW, Kim D, Sastry AV, Phaneuf P, Gao Y, Broddrick JT, ... ... Heckmann D, et al. Cellular responses to reactive oxygen species are predicted from molecular mechanisms. Proceedings of the National Academy of Sciences of the United States of America. PMID 31270234 DOI: 10.1073/Pnas.1905039116 |
0.535 |
|
2018 |
Heckmann D, Zielinski DC, Palsson BO. Modeling genome-wide enzyme evolution predicts strong epistasis underlying catalytic turnover rates. Nature Communications. 9: 5270. PMID 30532008 DOI: 10.1038/S41467-018-07649-1 |
0.651 |
|
2018 |
Heckmann D, Lloyd CJ, Mih N, Ha Y, Zielinski DC, Haiman ZB, Desouki AA, Lercher MJ, Palsson BO. Machine learning applied to enzyme turnover numbers reveals protein structural correlates and improves metabolic models. Nature Communications. 9: 5252. PMID 30531987 DOI: 10.1038/S41467-018-07652-6 |
0.739 |
|
2018 |
Kavvas ES, Catoiu E, Mih N, Yurkovich JT, Seif Y, Dillon N, Heckmann D, Anand A, Yang L, Nizet V, Monk JM, Palsson BO. Machine learning and structural analysis of Mycobacterium tuberculosis pan-genome identifies genetic signatures of antibiotic resistance. Nature Communications. 9: 4306. PMID 30333483 DOI: 10.1038/S41467-018-06634-Y |
0.691 |
|
2017 |
Kleinmanns JA, Schatlowski N, Heckmann D, Schubert D. BLISTER Regulates Polycomb-Target Genes, Represses Stress-Regulated Genes and Promotes Stress Responses in . Frontiers in Plant Science. 8: 1530. PMID 28955347 DOI: 10.3389/fpls.2017.01530 |
0.745 |
|
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