| Year |
Citation |
Score |
| 2024 |
Li M, Li Z, Chen X, Cui Y, Engelman AN, Craigie R. HIV-1 Intasomes Assembled with Excess Integrase C-Terminal Domain Protein Facilitate Structural Studies by Cryo-EM and Reveal the Role of the Integrase C-Terminal Tail in HIV-1 Integration. Viruses. 16. PMID 39066328 DOI: 10.3390/v16071166 |
0.578 |
|
| 2024 |
Li M, Yang R, Chen X, Wang H, Ghirlando R, Dimitriadis EK, Craigie R. HIV-1 integrase assembles multiple species of stable synaptic complex intasomes that are active for concerted DNA integration in vitro. Journal of Molecular Biology. 168557. PMID 38582148 DOI: 10.1016/j.jmb.2024.168557 |
0.532 |
|
| 2024 |
Mahajan PS, Smith SJ, Li M, Craigie R, Hughes SH, Zhao XZ, Burke TR. -Substituted Bicyclic Carbamoyl Pyridones: Integrase Strand Transfer Inhibitors that Potently Inhibit Drug-Resistant HIV-1 Integrase Mutants. Acs Infectious Diseases. PMID 38346249 DOI: 10.1021/acsinfecdis.3c00525 |
0.37 |
|
| 2024 |
Jing T, Shan Z, Dinh T, Biswas A, Jang S, Greenwood J, Li M, Zhang Z, Gray G, Shin HJ, Zhou B, Passos D, Aiyer S, Li Z, Craigie R, et al. Oligomeric HIV-1 Integrase Structures Reveal Functional Plasticity for Intasome Assembly and RNA Binding. Biorxiv : the Preprint Server For Biology. PMID 38328132 DOI: 10.1101/2024.01.26.577436 |
0.558 |
|
| 2023 |
Li M, Oliveira Passos D, Shan Z, Smith SJ, Sun Q, Biswas A, Choudhuri I, Strutzenberg TS, Haldane A, Deng N, Li Z, Zhao XZ, Briganti L, Kvaratskhelia M, Burke TR, ... ... Craigie R, et al. Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants. Science Advances. 9: eadg5953. PMID 37478179 DOI: 10.1126/sciadv.adg5953 |
0.351 |
|
| 2022 |
Sapp N, Burge N, Cox K, Prakash P, Balasubramaniam M, Thapa S, Christensen D, Li M, Linderberger J, Kvaratskhelia M, Pandhare J, Craigie R, Poirier MG, Dash C. HIV-1 Preintegration Complex Preferentially Integrates the Viral DNA into Nucleosomes Containing Trimethylated Histone 3-Lysine 36 Modification and Flanking Linker DNA. Journal of Virology. e0101122. PMID 36094316 DOI: 10.1128/jvi.01011-22 |
0.658 |
|
| 2021 |
Passos DO, Li M, Craigie R, Lyumkis D. Retroviral integrase: Structure, mechanism, and inhibition. The Enzymes. 50: 249-300. PMID 34861940 DOI: 10.1016/bs.enz.2021.06.007 |
0.54 |
|
| 2021 |
Davids BO, Balasubramaniam M, Sapp N, Prakash P, Ingram S, Li M, Craigie R, Hollis T, Pandhare J, Dash C. Human Three Prime Repair Exonuclease 1 Promotes HIV-1 Integration by Preferentially Degrading Unprocessed Viral DNA. Journal of Virology. JVI0055521. PMID 34105995 DOI: 10.1128/JVI.00555-21 |
0.676 |
|
| 2021 |
Craigie R. The molecular biology of HIV integrase. Future Virology. 7: 679-686. PMID 23024700 DOI: 10.2217/FVL.12.56 |
0.63 |
|
| 2020 |
Li M, Chen X, Wang H, Jurado KA, Engelman AN, Craigie R. A peptide derived from lens epithelium-derived growth factor stimulates HIV-1 DNA integration and facilitates intasome structural studies. Journal of Molecular Biology. PMID 32061936 DOI: 10.1016/J.Jmb.2020.01.040 |
0.582 |
|
| 2020 |
Passos DO, Li M, Jóźwik IK, Zhao XZ, Santos-Martins D, Yang R, Smith SJ, Jeon Y, Forli S, Hughes SH, Burke TR, Craigie R, Lyumkis D. Structural basis for strand transfer inhibitor binding to HIV intasomes. Science (New York, N.Y.). PMID 32001521 DOI: 10.1126/science.aay8015 |
0.557 |
|
| 2019 |
Rose KM, Alves Ferreira-Bravo I, Li M, Craigie R, Ditzler MA, Holliger P, DeStefano JJ. Selection of 2'-Deoxy-2'-Fluoroarabino Nucleic Acid (FANA) Aptamers that Bind HIV-1 Integrase with Picomolar Affinity. Acs Chemical Biology. PMID 31560515 DOI: 10.1021/Acschembio.9B00237 |
0.414 |
|
| 2018 |
Craigie R. Nucleoprotein Intermediates in HIV-1 DNA Integration: Structure and Function of HIV-1 Intasomes. Sub-Cellular Biochemistry. 88: 189-210. PMID 29900498 DOI: 10.1007/978-981-10-8456-0_9 |
0.685 |
|
| 2017 |
Passos DO, Li M, Yang R, Rebensburg SV, Ghirlando R, Jeon Y, Shkriabai N, Kvaratskhelia M, Craigie R, Lyumkis D. Cryo-EM structures and atomic model of the HIV-1 strand transfer complex intasome. Science (New York, N.Y.). 355: 89-92. PMID 28059769 DOI: 10.1126/Science.Aah5163 |
0.615 |
|
| 2015 |
Li M, Lin S, Craigie R. Outer domains of integrase within retroviral intasomes are dispensible for catalysis of DNA integration. Protein Science : a Publication of the Protein Society. PMID 26537415 DOI: 10.1002/pro.2837 |
0.309 |
|
| 2014 |
Craigie R, Bushman FD. Host Factors in Retroviral Integration and the Selection of Integration Target Sites. Microbiology Spectrum. 2. PMID 26104434 DOI: 10.1128/Microbiolspec.Mdna3-0026-2014 |
0.474 |
|
| 2014 |
Li M, Jurado KA, Lin S, Engelman A, Craigie R. Engineered hyperactive integrase for concerted HIV-1 DNA integration. Plos One. 9: e105078. PMID 25119883 DOI: 10.1371/Journal.Pone.0105078 |
0.662 |
|
| 2012 |
da Silva FA, Li M, Rato S, Maia S, Malhó R, Warren K, Harrich D, Craigie R, Barbas C, Goncalves J. Recombinant rabbit single-chain antibodies bind to the catalytic and C-terminal domains of HIV-1 integrase protein and strongly inhibit HIV-1 replication. Biotechnology and Applied Biochemistry. 59: 353-66. PMID 23586912 DOI: 10.1002/Bab.1034 |
0.523 |
|
| 2012 |
Yin Z, Lapkouski M, Yang W, Craigie R. Assembly of prototype foamy virus strand transfer complexes on product DNA bypassing catalysis of integration. Protein Science : a Publication of the Protein Society. 21: 1849-57. PMID 23011895 DOI: 10.1002/Pro.2166 |
0.619 |
|
| 2012 |
Craigie R, Bushman FD. HIV DNA integration. Cold Spring Harbor Perspectives in Medicine. 2: a006890. PMID 22762018 DOI: 10.1101/Cshperspect.A006890 |
0.498 |
|
| 2012 |
Li M, Ivanov V, Mizuuchi M, Mizuuchi K, Craigie R. DNA requirements for assembly and stability of HIV-1 intasomes. Protein Science : a Publication of the Protein Society. 21: 249-57. PMID 22124978 DOI: 10.1002/Pro.2010 |
0.512 |
|
| 2011 |
Huang Y, Cai M, Clore GM, Craigie R. No interaction of barrier-to-autointegration factor (BAF) with HIV-1 MA, cone-rod homeobox (Crx) or MAN1-C in absence of DNA. Plos One. 6: e25123. PMID 21966431 DOI: 10.1371/journal.pone.0025123 |
0.529 |
|
| 2011 |
Kessl JJ, Li M, Ignatov M, Shkriabai N, Eidahl JO, Feng L, Musier-Forsyth K, Craigie R, Kvaratskhelia M. FRET analysis reveals distinct conformations of in tetramers in the presence of viral DNA or LEDGF/p75 Nucleic Acids Research. 39: 9009-9022. PMID 21771857 DOI: 10.1093/Nar/Gkr581 |
0.491 |
|
| 2010 |
Yin Z, Craigie R. Modeling the HIV-1 Intasome: A Prototype View of the Target of Integrase Inhibitors. Viruses. 2: 2777-81. PMID 21994639 DOI: 10.3390/V2122777 |
0.622 |
|
| 2010 |
Cai M, Huang Y, Craigie R, Clore GM. Structural basis of the association of HIV-1 matrix protein with DNA. Plos One. 5: e15675. PMID 21203471 DOI: 10.1371/journal.pone.0015675 |
0.531 |
|
| 2010 |
Kotova S, Li M, Dimitriadis EK, Craigie R. Nucleoprotein intermediates in HIV-1 DNA integration visualized by atomic force microscopy. Journal of Molecular Biology. 399: 491-500. PMID 20416324 DOI: 10.1016/j.jmb.2010.04.026 |
0.603 |
|
| 2010 |
Craigie R. Targeting HIV-1 DNA integration by swapping tethers. Proceedings of the National Academy of Sciences of the United States of America. 107: 2735-6. PMID 20145107 DOI: 10.1073/pnas.0915097107 |
0.633 |
|
| 2009 |
Skoko D, Li M, Huang Y, Mizuuchi M, Cai M, Bradley CM, Pease PJ, Xiao B, Marko JF, Craigie R, Mizuuchi K. Barrier-to-autointegration factor (BAF) condenses DNA by looping. Proceedings of the National Academy of Sciences of the United States of America. 106: 16610-5. PMID 19805345 DOI: 10.1073/Pnas.0909077106 |
0.415 |
|
| 2009 |
Li M, Craigie R. Nucleoprotein complex intermediates in HIV-1 integration. Methods (San Diego, Calif.). 47: 237-42. PMID 19232539 DOI: 10.1016/j.ymeth.2009.02.001 |
0.624 |
|
| 2007 |
Suzuki Y, Craigie R. The road to chromatin - nuclear entry of retroviruses. Nature Reviews. Microbiology. 5: 187-96. PMID 17304248 DOI: 10.1038/nrmicro1579 |
0.581 |
|
| 2006 |
Li M, Craigie R. Virology: HIV goes nuclear. Nature. 441: 581-2. PMID 16738646 DOI: 10.1038/441581a |
0.471 |
|
| 2006 |
Li M, Mizuuchi M, Burke TR, Craigie R. Retroviral DNA integration: reaction pathway and critical intermediates. The Embo Journal. 25: 1295-304. PMID 16482214 DOI: 10.1038/sj.emboj.7601005 |
0.535 |
|
| 2005 |
Bradley CM, Craigie R. Seeing is believing: Structure of the catalytic domain of HIV-1 integrase in complex with human LEDGF/p75 Proceedings of the National Academy of Sciences of the United States of America. 102: 17543-17544. PMID 16314581 DOI: 10.1073/pnas.0509078102 |
0.384 |
|
| 2005 |
Bradley CM, Ronning DR, Ghirlando R, Craigie R, Dyda F. Structural basis for DNA bridging by barrier-to-autointegration factor. Nature Structural & Molecular Biology. 12: 935-6. PMID 16155580 DOI: 10.1038/Nsmb989 |
0.38 |
|
| 2005 |
Li M, Craigie R. Processing of viral DNA ends channels the HIV-1 integration reaction to concerted integration. The Journal of Biological Chemistry. 280: 29334-9. PMID 15958388 DOI: 10.1074/jbc.M505367200 |
0.508 |
|
| 2005 |
Williams KL, Zhang Y, Shkriabai N, Karki RG, Nicklaus MC, Kotrikadze N, Hess S, Le Grice SF, Craigie R, Pathak VK, Kvaratskhelia M. Mass spectrometric analysis of the HIV-1 integrase-pyridoxal 5'-phosphate complex reveals a new binding site for a nucleotide inhibitor. The Journal of Biological Chemistry. 280: 7949-55. PMID 15615720 DOI: 10.1074/Jbc.M413579200 |
0.417 |
|
| 2004 |
Suzuki Y, Yang H, Craigie R. LAP2alpha and BAF collaborate to organize the Moloney murine leukemia virus preintegration complex. The Embo Journal. 23: 4670-8. PMID 15510219 DOI: 10.1038/sj.emboj.7600452 |
0.514 |
|
| 2004 |
Shkriabai N, Patil SS, Hess S, Budihas SR, Craigie R, Burke TR, Le Grice SF, Kvaratskhelia M. Identification of an inhibitor-binding site to HIV-1 integrase with affinity acetylation and mass spectrometry. Proceedings of the National Academy of Sciences of the United States of America. 101: 6894-9. PMID 15118107 DOI: 10.1073/pnas.0400873101 |
0.375 |
|
| 2002 |
Suzuki Y, Craigie R. Regulatory mechanisms by which barrier-to-autointegration factor blocks autointegration and stimulates intermolecular integration of Moloney murine leukemia virus preintegration complexes. Journal of Virology. 76: 12376-80. PMID 12414981 DOI: 10.1128/jvi.76.23.12376-12380.2002 |
0.507 |
|
| 2002 |
Segura-Totten M, Kowalski AK, Craigie R, Wilson KL. Barrier-to-autointegration factor: major roles in chromatin decondensation and nuclear assembly. The Journal of Cell Biology. 158: 475-85. PMID 12163470 DOI: 10.1083/Jcb.200202019 |
0.343 |
|
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