Monica Medina - Publications

Affiliations: 
Rosenstiel School of Marine and Atmospheric Science University of Miami, Coral Gables, FL 

36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Ohdera A, Attarwala K, Wu V, Henry R, Laird H, Hofmann DK, Fitt WK, Medina M. Comparative Genomic Insights into Bacterial Induction of Larval Settlement and Metamorphosis in the Upside-Down Jellyfish . Msphere. e0031522. PMID 37154768 DOI: 10.1128/msphere.00315-22  0.337
2023 Tandon K, Ricci F, Costa J, Medina M, Kühl M, Blackall LL, Verbruggen H. Genomic view of the diversity and functional role of archaea and bacteria in the skeleton of the reef-building corals Porites lutea and Isopora palifera. Gigascience. 12. PMID 36683362 DOI: 10.1093/gigascience/giac127  0.344
2021 Avila-Magaña V, Kamel B, DeSalvo M, Gómez-Campo K, Enríquez S, Kitano H, Rohlfs RV, Iglesias-Prieto R, Medina M. Elucidating gene expression adaptation of phylogenetically divergent coral holobionts under heat stress. Nature Communications. 12: 5731. PMID 34593802 DOI: 10.1038/s41467-021-25950-4  0.753
2021 Sweet M, Villela H, Keller-Costa T, Costa R, Romano S, Bourne DG, Cárdenas A, Huggett MJ, Kerwin AH, Kuek F, Medina M, Meyer JL, Müller M, Pollock FJ, Rappé MS, et al. Insights into the Cultured Bacterial Fraction of Corals. Msystems. e0124920. PMID 34156291 DOI: 10.1128/mSystems.01249-20  0.603
2021 Dittami SM, Arboleda E, Auguet JC, Bigalke A, Briand E, Cárdenas P, Cardini U, Decelle J, Engelen AH, Eveillard D, Gachon CMM, Griffiths SM, Harder T, Kayal E, Kazamia E, ... ... Medina M, et al. A community perspective on the concept of marine holobionts: current status, challenges, and future directions. Peerj. 9: e10911. PMID 33665032 DOI: 10.7717/peerj.10911  0.582
2021 Iha C, Dougan KE, Varela JA, Avila V, Jackson CJ, Bogaert KA, Chen Y, Judd LM, Wick R, Holt KE, Pasella MM, Ricci F, Repetti SI, Medina M, Marcelino VR, et al. Genomic adaptations to an endolithic lifestyle in the coral-associated alga Ostreobium. Current Biology : Cb. PMID 33548192 DOI: 10.1016/j.cub.2021.01.018  0.345
2020 van Oppen MJH, Medina M. Coral evolutionary responses to microbial symbioses. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20190591. PMID 32772672 DOI: 10.1098/rstb.2019.0591  0.386
2018 Lopez JV, Kamel B, Medina M, Collins T, Baums IB. Multiple Facets of Marine Invertebrate Conservation Genomics. Annual Review of Animal Biosciences. PMID 30485758 DOI: 10.1146/Annurev-Animal-020518-115034  0.738
2017 Adema CM, Hillier LW, Jones CS, Loker ES, Knight M, Minx P, Oliveira G, Raghavan N, Shedlock A, do Amaral LR, Arican-Goktas HD, Assis JG, Baba EH, Baron OL, Bayne CJ, ... ... Medina M, et al. Corrigendum: Whole genome analysis of a schistosomiasis-transmitting freshwater snail. Nature Communications. 8: 16153. PMID 28832025 DOI: 10.1038/Ncomms16153  0.692
2017 Adema CM, Hillier LW, Jones CS, Loker ES, Knight M, Minx P, Oliveira G, Raghavan N, Shedlock A, do Amaral LR, Arican-Goktas HD, Assis JG, Baba EH, Baron OL, Bayne CJ, ... ... Medina M, et al. Whole genome analysis of a schistosomiasis-transmitting freshwater snail. Nature Communications. 8: 15451. PMID 28508897 DOI: 10.1038/Ncomms15451  0.735
2016 Bhattacharya D, Agrawal S, Aranda M, Baumgarten S, Belcaid M, Drake JL, Erwin D, Foret S, Gates RD, Gruber DF, Kamel B, Lesser MP, Levy O, Liew YJ, MacManes M, ... ... Medina M, et al. Comparative genomics explains the evolutionary success of reef-forming corals. Elife. 5. PMID 27218454 DOI: 10.7554/Elife.13288  0.799
2015 Baker EC, Layden MJ, van Rossum DB, Kamel B, Medina M, Simpson E, Jegla T. Functional Characterization of Cnidarian HCN Channels Points to an Early Evolution of Ih. Plos One. 10: e0142730. PMID 26555239 DOI: 10.1371/Journal.Pone.0142730  0.673
2015 Pinzón JH, Kamel B, Burge CA, Harvell CD, Medina M, Weil E, Mydlarz LD. Whole transcriptome analysis reveals changes in expression of immune-related genes during and after bleaching in a reef-building coral. Royal Society Open Science. 2: 140214. PMID 26064625 DOI: 10.1098/Rsos.140214  0.735
2015 Li X, Liu H, Chu Luo J, Rhodes SA, Trigg LM, van Rossum DB, Anishkin A, Diatta FH, Sassic JK, Simmons DK, Kamel B, Medina M, Martindale MQ, Jegla T. Major diversification of voltage-gated K+ channels occurred in ancestral parahoxozoans. Proceedings of the National Academy of Sciences of the United States of America. 112: E1010-9. PMID 25691740 DOI: 10.1073/Pnas.1422941112  0.681
2014 Closek CJ, Sunagawa S, DeSalvo MK, Piceno YM, DeSantis TZ, Brodie EL, Weber MX, Voolstra CR, Andersen GL, Medina M. Coral transcriptome and bacterial community profiles reveal distinct Yellow Band Disease states in Orbicella faveolata. The Isme Journal. 8: 2411-22. PMID 24950107 DOI: 10.1038/ismej.2014.85  0.644
2014 Bracken-Grissom H, Collins AG, Collins T, Crandall K, Distel D, Dunn C, Giribet G, Haddock S, Knowlton N, Martindale M, Medina M, Messing C, O'Brien SJ, Paulay G, et al. The Global Invertebrate Genomics Alliance (GIGA): developing community resources to study diverse invertebrate genomes. The Journal of Heredity. 105: 1-18. PMID 24336862 DOI: 10.1093/jhered/est084  0.77
2013 Shoguchi E, Shinzato C, Kawashima T, Gyoja F, Mungpakdee S, Koyanagi R, Takeuchi T, Hisata K, Tanaka M, Fujiwara M, Hamada M, Seidi A, Fujie M, Usami T, Goto H, ... ... Medina M, et al. Draft assembly of the Symbiodinium minutum nuclear genome reveals dinoflagellate gene structure. Current Biology : Cb. 23: 1399-408. PMID 23850284 DOI: 10.1016/J.Cub.2013.05.062  0.32
2012 Aranda M, DeSalvo MK, Bayer T, Medina M, Voolstra CR. Evolutionary insights into scleractinian corals using comparative genomic hybridizations. Bmc Genomics. 13: 501. PMID 22994626 DOI: 10.1186/1471-2164-13-501  0.551
2012 Bayer T, Aranda M, Sunagawa S, Yum LK, Desalvo MK, Lindquist E, Coffroth MA, Voolstra CR, Medina M. Symbiodinium transcriptomes: genome insights into the dinoflagellate symbionts of reef-building corals. Plos One. 7: e35269. PMID 22529998 DOI: 10.1371/journal.pone.0035269  0.726
2011 Aranda M, Banaszak AT, Bayer T, Luyten JR, Medina M, Voolstra CR. Differential sensitivity of coral larvae to natural levels of ultraviolet radiation during the onset of larval competence. Molecular Ecology. 20: 2955-72. PMID 21689186 DOI: 10.1111/j.1365-294X.2011.05153.x  0.467
2011 Voolstra CR, Sunagawa S, Matz MV, Bayer T, Aranda M, Buschiazzo E, Desalvo MK, Lindquist E, Szmant AM, Coffroth MA, Medina M. Rapid evolution of coral proteins responsible for interaction with the environment. Plos One. 6: e20392. PMID 21633702 DOI: 10.1371/Journal.Pone.0020392  0.772
2011 Heyland A, Vue Z, Voolstra CR, Medina M, Moroz LL. Developmental transcriptome of Aplysia californica. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 316: 113-34. PMID 21328528 DOI: 10.1002/Jez.B.21383  0.583
2010 Portune KJ, Voolstra CR, Medina M, Szmant AM. Development and heat stress-induced transcriptomic changes during embryogenesis of the scleractinian coral Acropora palmata. Marine Genomics. 3: 51-62. PMID 21798197 DOI: 10.1016/j.margen.2010.03.002  0.743
2010 Polato NR, Voolstra CR, Schnetzer J, DeSalvo MK, Randall CJ, Szmant AM, Medina M, Baums IB. Location-specific responses to thermal stress in larvae of the reef-building coral Montastraea faveolata. Plos One. 5: e11221. PMID 20585643 DOI: 10.1371/Journal.Pone.0011221  0.757
2010 Sunagawa S, Woodley CM, Medina M. Threatened corals provide underexplored microbial habitats. Plos One. 5: e9554. PMID 20221265 DOI: 10.1371/journal.pone.0009554  0.584
2009 Reyes-Bermudez A, Desalvo MK, Voolstra CR, Sunagawa S, Szmant AM, Iglesias-Prieto R, Medina M. Gene expression microarray analysis encompassing metamorphosis and the onset of calcification in the scleractinian coral Montastraea faveolata. Marine Genomics. 2: 149-59. PMID 21798184 DOI: 10.1016/J.Margen.2009.07.002  0.758
2009 Voolstra CR, Sunagawa S, Schwarz JA, Coffroth MA, Yellowlees D, Leggat W, Medina M. Evolutionary analysis of orthologous cDNA sequences from cultured and symbiotic dinoflagellate symbionts of reef-building corals (Dinophyceae: Symbiodinium). Comparative Biochemistry and Physiology. Part D, Genomics & Proteomics. 4: 67-74. PMID 20403741 DOI: 10.1016/j.cbd.2008.11.001  0.718
2009 Voolstra CR, Schnetzer J, Peshkin L, Randall CJ, Szmant AM, Medina M. Effects of temperature on gene expression in embryos of the coral Montastraea faveolata. Bmc Genomics. 10: 627. PMID 20030803 DOI: 10.1186/1471-2164-10-627  0.75
2009 Sunagawa S, Wilson EC, Thaler M, Smith ML, Caruso C, Pringle JR, Weis VM, Medina M, Schwarz JA. Generation and analysis of transcriptomic resources for a model system on the rise: the sea anemone Aiptasia pallida and its dinoflagellate endosymbiont. Bmc Genomics. 10: 258. PMID 19500365 DOI: 10.1186/1471-2164-10-258  0.655
2009 Voolstra CR, Schwarz JA, Schnetzer J, Sunagawa S, Desalvo MK, Szmant AM, Coffroth MA, Medina M. The host transcriptome remains unaltered during the establishment of coral-algal symbioses. Molecular Ecology. 18: 1823-33. PMID 19317843 DOI: 10.1111/j.1365-294X.2009.04167.x  0.756
2009 Sunagawa S, DeSalvo MK, Voolstra CR, Reyes-Bermudez A, Medina M. Identification and gene expression analysis of a taxonomically restricted cysteine-rich protein family in reef-building corals. Plos One. 4: e4865. PMID 19283069 DOI: 10.1371/journal.pone.0004865  0.687
2009 Sunagawa S, DeSantis TZ, Piceno YM, Brodie EL, DeSalvo MK, Voolstra CR, Weil E, Andersen GL, Medina M. Bacterial diversity and White Plague Disease-associated community changes in the Caribbean coral Montastraea faveolata. The Isme Journal. 3: 512-21. PMID 19129866 DOI: 10.1038/Ismej.2008.131  0.702
2008 Sunagawa S, Choi J, Forman HJ, Medina M. Hyperthermic stress-induced increase in the expression of glutamate-cysteine ligase and glutathione levels in the symbiotic sea anemone Aiptasia pallida. Comparative Biochemistry and Physiology. Part B, Biochemistry & Molecular Biology. 151: 133-8. PMID 18602489 DOI: 10.1016/J.Cbpb.2008.06.007  0.585
2008 Schwarz JA, Brokstein PB, Voolstra C, Terry AY, Manohar CF, Miller DJ, Szmant AM, Coffroth MA, Medina M. Coral life history and symbiosis: functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata. Bmc Genomics. 9: 97. PMID 18298846 DOI: 10.1186/1471-2164-9-97  0.78
2006 Tyler BM, Tripathy S, Zhang X, Dehal P, Jiang RH, Aerts A, Arredondo FD, Baxter L, Bensasson D, Beynon JL, Chapman J, Damasceno CM, Dorrance AE, Dou D, Dickerman AW, ... ... Medina M, et al. Phytophthora genome sequences uncover evolutionary origins and mechanisms of pathogenesis. Science (New York, N.Y.). 313: 1261-6. PMID 16946064 DOI: 10.1126/Science.1128796  0.331
2002 Dehal P, Satou Y, Campbell RK, Chapman J, Degnan B, De Tomaso A, Davidson B, Di Gregorio A, Gelpke M, Goodstein DM, Harafuji N, Hastings KE, Ho I, Hotta K, Huang W, ... ... Medina M, et al. The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins. Science (New York, N.Y.). 298: 2157-67. PMID 12481130 DOI: 10.1126/Science.1080049  0.326
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