| Year |
Citation |
Score |
| 2017 |
Meyer KM, Klein AM, Rodrigues JL, Nüsslein K, Tringe SG, Mirza BS, Tiedje JM, Bohannan BJ. Conversion of Amazon rainforest to agriculture alters community traits of methane-cycling organisms. Molecular Ecology. PMID 28100018 DOI: 10.1111/Mec.14011 |
0.412 |
|
| 2016 |
Hambright WS, Deng J, Tiedje JM, Brettar I, Rodrigues JL. Shewanella baltica Ecotypes Have Wide Transcriptional Variation under the Same Growth Conditions. Msphere. 1. PMID 27777983 DOI: 10.1128/mSphere.00158-16 |
0.578 |
|
| 2015 |
Navarrete AA, Venturini AM, Meyer KM, Klein AM, Tiedje JM, Bohannan BJ, Nüsslein K, Tsai SM, Rodrigues JL. Differential Response of Acidobacteria Subgroups to Forest-to-Pasture Conversion and Their Biogeographic Patterns in the Western Brazilian Amazon. Frontiers in Microbiology. 6: 1443. PMID 26733981 DOI: 10.3389/Fmicb.2015.01443 |
0.388 |
|
| 2014 |
Paula FS, Rodrigues JL, Zhou J, Wu L, Mueller RC, Mirza BS, Bohannan BJ, Nüsslein K, Deng Y, Tiedje JM, Pellizari VH. Land use change alters functional gene diversity, composition and abundance in Amazon forest soil microbial communities. Molecular Ecology. 23: 2988-99. PMID 24806276 DOI: 10.1111/Mec.12786 |
0.561 |
|
| 2014 |
Deng J, Brettar I, Luo C, Auchtung J, Konstantinidis KT, Rodrigues JL, Höfle M, Tiedje JM. Stability, genotypic and phenotypic diversity of Shewanella baltica in the redox transition zone of the Baltic Sea. Environmental Microbiology. 16: 1854-66. PMID 24286373 DOI: 10.1111/1462-2920.12344 |
0.636 |
|
| 2013 |
Rodrigues JL, Pellizari VH, Mueller R, Baek K, Jesus Eda C, Paula FS, Mirza B, Hamaoui GS, Tsai SM, Feigl B, Tiedje JM, Bohannan BJ, Nüsslein K. Conversion of the Amazon rainforest to agriculture results in biotic homogenization of soil bacterial communities. Proceedings of the National Academy of Sciences of the United States of America. 110: 988-93. PMID 23271810 DOI: 10.1073/Pnas.1220608110 |
0.406 |
|
| 2012 |
Wertz JT, Kim E, Breznak JA, Schmidt TM, Rodrigues JL. Genomic and physiological characterization of the Verrucomicrobia isolate Diplosphaera colitermitum gen. nov., sp. nov., reveals microaerophily and nitrogen fixation genes. Applied and Environmental Microbiology. 78: 1544-55. PMID 22194293 DOI: 10.1128/Aem.06466-11 |
0.354 |
|
| 2011 |
Caleja C, Toro Md, Gonçalves A, Themudo P, Vieira-Pinto M, Monteiro D, Rodrigues J, Sáenz Y, Carvalho C, Igrejas G, Torres C, Poeta P. Antimicrobial resistance and class I integrons in Salmonella enterica isolates from wild boars and Bísaro pigs International Microbiology. 14: 19-24. PMID 22015698 DOI: 10.2436/20.1501.01.131 |
0.362 |
|
| 2011 |
Rodrigues JL, Serres MH, Tiedje JM. Large-scale comparative phenotypic and genomic analyses reveal ecological preferences of shewanella species and identify metabolic pathways conserved at the genus level. Applied and Environmental Microbiology. 77: 5352-60. PMID 21642407 DOI: 10.1128/Aem.00097-11 |
0.499 |
|
| 2011 |
Cruz-García C, Murray AE, Rodrigues JL, Gralnick JA, McCue LA, Romine MF, Löffler FE, Tiedje JM. Fnr (EtrA) acts as a fine-tuning regulator of anaerobic metabolism in Shewanella oneidensis MR-1. Bmc Microbiology. 11: 64. PMID 21450087 DOI: 10.1186/1471-2180-11-64 |
0.66 |
|
| 2011 |
Silva N, Igrejas G, Vaz J, Araújo C, Cardoso L, Rodrigues J, Torres C, Poeta P. Virulence factors in enterococci from partridges (Alectoris rufa) representing a food safety problem. Foodborne Pathogens and Disease. 8: 831-3. PMID 21214387 DOI: 10.1089/Fpd.2010.0781 |
0.408 |
|
| 2011 |
Mueller RC, Nüsslein K, Rodrigues J, Tiedje J, Pellizari V, Feigl B, Bohannan B. Microbial responses to changes in land use Nature Precedings. 6: 1-1. DOI: 10.1038/Npre.2011.5505.1 |
0.412 |
|
| 2010 |
Gonçalves A, Torres C, Silva N, Carneiro C, Radhouani H, Coelho C, Araújo C, Rodrigues J, Vinué L, Somalo S, Poeta P, Igrejas G. Genetic characterization of extended-spectrum beta-lactamases in Escherichia coli isolates of pigs from a Portuguese intensive swine farm. Foodborne Pathogens and Disease. 7: 1569-1573. PMID 20704503 DOI: 10.1089/Fpd.2010.0598 |
0.37 |
|
| 2010 |
Hinsa-Leasure SM, Bhavaraju L, Rodrigues JL, Bakermans C, Gilichinsky DA, Tiedje JM. Characterization of a bacterial community from a Northeast Siberian seacoast permafrost sample. Fems Microbiology Ecology. 74: 103-13. PMID 20695892 DOI: 10.1111/J.1574-6941.2010.00945.X |
0.513 |
|
| 2010 |
Carneiro C, Araújo C, Gonçalves A, Vinué L, Somalo S, Ruiz E, Uliyakina I, Rodrigues J, Igrejas G, Poeta P, Torres C. Detection of CTX-M-14 and TEM-52 extended-spectrum beta-lactamases in fecal Escherichia coli isolates of captive ostrich in Portugal. Foodborne Pathogens and Disease. 7: 991-994. PMID 20367084 DOI: 10.1089/Fpd.2009.0494 |
0.345 |
|
| 2010 |
Kielak A, Rodrigues JL, Kuramae EE, Chain PS, van Veen JA, Kowalchuk GA. Phylogenetic and metagenomic analysis of Verrucomicrobia in former agricultural grassland soil. Fems Microbiology Ecology. 71: 23-33. PMID 19811538 DOI: 10.1111/j.1574-6941.2009.00785.x |
0.453 |
|
| 2009 |
Konstantinidis KT, Serres MH, Romine MF, Rodrigues JL, Auchtung J, McCue LA, Lipton MS, Obraztsova A, Giometti CS, Nealson KH, Fredrickson JK, Tiedje JM. Comparative systems biology across an evolutionary gradient within the Shewanella genus. Proceedings of the National Academy of Sciences of the United States of America. 106: 15909-14. PMID 19805231 DOI: 10.1073/Pnas.0902000106 |
0.6 |
|
| 2009 |
Guimarães B, Barreto Â, Radhouani H, Figueiredo N, Gaspar E, Rodrigues J, Torres C, Igrejas G, Poeta P. Genetic Detection of Extended-Spectrum β-Lactamase–Containing Escherichia coli Isolates and Vancomycin-Resistant Enterococci in Fecal Samples of Healthy Children Microbial Drug Resistance. 15: 211-216. PMID 19728780 DOI: 10.1089/Mdr.2009.0910 |
0.36 |
|
| 2009 |
Sul WJ, Park J, Quensen JF, Rodrigues JL, Seliger L, Tsoi TV, Zylstra GJ, Tiedje JM. DNA-stable isotope probing integrated with metagenomics for retrieval of biphenyl dioxygenase genes from polychlorinated biphenyl-contaminated river sediment. Applied and Environmental Microbiology. 75: 5501-6. PMID 19648381 DOI: 10.1128/Aem.00121-09 |
0.662 |
|
| 2009 |
Costa D, Vinué L, Poeta P, Coelho AC, Matos M, Sáenz Y, Somalo S, Zarazaga M, Rodrigues J, Torres C. Prevalence of extended-spectrum beta-lactamase-producing Escherichia coli isolates in faecal samples of broilers. Veterinary Microbiology. 138: 339-344. PMID 19372011 DOI: 10.1016/J.Vetmic.2009.03.029 |
0.375 |
|
| 2009 |
Figueiredo N, Radhouani H, Gonçalves A, Rodrigues J, Carvalho C, Igrejas G, Poeta P. Genetic characterization of vancomycin-resistant enterococci isolates from wild rabbits. Journal of Basic Microbiology. 49: 491-494. PMID 19322837 DOI: 10.1002/Jobm.200800387 |
0.381 |
|
| 2008 |
Poeta P, Igrejas G, Costa D, Sargo R, Rodrigues J, Torres C. Virulence factors and bacteriocins in faecal enterococci of wild boars. Journal of Basic Microbiology. 48: 385-392. PMID 18759237 DOI: 10.1002/Jobm.200700327 |
0.421 |
|
| 2008 |
Fredrickson JK, Romine MF, Beliaev AS, Auchtung JM, Driscoll ME, Gardner TS, Nealson KH, Osterman AL, Pinchuk G, Reed JL, Rodionov DA, Rodrigues JL, Saffarini DA, Serres MH, Spormann AM, et al. Towards environmental systems biology of Shewanella. Nature Reviews. Microbiology. 6: 592-603. PMID 18604222 DOI: 10.1038/Nrmicro1947 |
0.416 |
|
| 2008 |
Costa D, Poeta P, Sáenz Y, Vinué L, Coelho AC, Matos M, Rojo-Bezares B, Rodrigues J, Torres C. Mechanisms of antibiotic resistance in Escherichia coli isolates recovered from wild animals. Microbial Drug Resistance. 14: 71-77. PMID 18321208 DOI: 10.1089/Mdr.2008.0795 |
0.379 |
|
| 2008 |
Costa D, Poeta P, Sáenz Y, Coelho AC, Matos M, Vinué L, Rodrigues J, Torres C. Prevalence of antimicrobial resistance and resistance genes in faecal Escherichia coli isolates recovered from healthy pets. Veterinary Microbiology. 127: 97-105. PMID 17870255 DOI: 10.1016/J.Vetmic.2007.08.004 |
0.353 |
|
| 2007 |
Leigh MB, Pellizari VH, Uhlík O, Sutka R, Rodrigues J, Ostrom NE, Zhou J, Tiedje JM. Biphenyl-utilizing bacteria and their functional genes in a pine root zone contaminated with polychlorinated biphenyls (PCBs) Isme Journal. 1: 134-148. PMID 18043623 DOI: 10.1038/Ismej.2007.26 |
0.626 |
|
| 2007 |
Poeta P, Costa D, Igrejas G, Rodrigues J, Torres C. Phenotypic and genotypic characterization of antimicrobial resistance in faecal enterococci from wild boars (Sus scrofa). Veterinary Microbiology. 125: 368-74. PMID 17658226 DOI: 10.1016/J.Vetmic.2007.06.003 |
0.353 |
|
| 2007 |
Poeta P, Costa D, Igrejas G, Sáenz Y, Zarazaga M, Rodrigues J, Torres C. Polymorphisms of the pbp5 gene and correlation with ampicillin resistance in Enterococcus faecium isolates of animal origin. Journal of Medical Microbiology. 56: 236-40. PMID 17244806 DOI: 10.1099/Jmm.0.46778-0 |
0.327 |
|
| 2007 |
Poeta P, Costa D, Rojo-Bezares B, Zarazaga M, Klibi N, Rodrigues J, Torres C. Detection of antimicrobial activities and bacteriocin structural genes in faecal enterococci of wild animals. Microbiological Research. 162: 257-263. PMID 16872815 DOI: 10.1016/J.Micres.2006.06.003 |
0.399 |
|
| 2006 |
Poeta P, Costa D, Klibi N, Rodrigues J, Torres C. Phenotypic and Genotypic Study of Gelatinase and β‐Haemolysis Activities in Faecal Enterococci of Poultry in Portugal Journal of Veterinary Medicine Series B-Infectious Diseases and Veterinary Public Health. 53: 203-208. PMID 16732876 DOI: 10.1111/J.1439-0450.2006.00941.X |
0.372 |
|
| 2006 |
Poeta P, Costa D, Rodrigues J, Torres C. Detection of genes encoding virulence factors and bacteriocins in fecal enterococci of poultry in Portugal. Avian Diseases. 50: 64-8. PMID 16617984 DOI: 10.1637/7394-061505R.1 |
0.311 |
|
| 2006 |
Rodrigues JL, Kachel CA, Aiello MR, Quensen JF, Maltseva OV, Tsoi TV, Tiedje JM. Degradation of aroclor 1242 dechlorination products in sediments by Burkholderia xenovorans LB400(ohb) and Rhodococcus sp. strain RHA1(fcb). Applied and Environmental Microbiology. 72: 2476-82. PMID 16597946 DOI: 10.1128/Aem.72.4.2476-2482.2006 |
0.415 |
|
| 2006 |
Denef VJ, Klappenbach JA, Patrauchan MA, Florizone C, Rodrigues JL, Tsoi TV, Verstraete W, Eltis LD, Tiedje JM. Genetic and genomic insights into the role of benzoate-catabolic pathway redundancy in Burkholderia xenovorans LB400. Applied and Environmental Microbiology. 72: 585-95. PMID 16391095 DOI: 10.1128/AEM.72.1.585-595.2006 |
0.417 |
|
| 2005 |
Poeta P, Costa D, Sáenz Y, Klibi N, Ruiz‐Larrea F, Rodrigues J, Torres C. Characterization of Antibiotic Resistance Genes and Virulence Factors in Faecal Enterococci of Wild Animals in Portugal Journal of Veterinary Medicine Series B-Infectious Diseases and Veterinary Public Health. 52: 396-402. PMID 16283919 DOI: 10.1111/J.1439-0450.2005.00881.X |
0.393 |
|
| 2003 |
Denef VJ, Park J, Rodrigues JL, Tsoi TV, Hashsham SA, Tiedje JM. Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities. Environmental Microbiology. 5: 933-43. PMID 14510847 DOI: 10.1046/J.1462-2920.2003.00490.X |
0.452 |
|
| 2002 |
Rodrigues J, Poeta P, Martins A, Costa D. The Importance of Pets as Reservoirs of Resistant Enterococcus Strains, with Special Reference to Vancomycin Journal of Veterinary Medicine Series B-Infectious Diseases and Veterinary Public Health. 49: 278-280. PMID 12241027 DOI: 10.1046/J.1439-0450.2002.00561.X |
0.351 |
|
| 2002 |
Rodrigues JL, Aiello MR, Urbance JW, Tsoi TV, Tiedje JM. Use of both 16S rRNA and engineered functional genes with real-time PCR to quantify an engineered, PCB-degrading Rhodococcus in soil. Journal of Microbiological Methods. 51: 181-9. PMID 12133610 DOI: 10.1016/S0167-7012(02)00067-2 |
0.447 |
|
| 2001 |
Rodrigues JL, Maltseva OV, Tsoi TV, Helton RR, Quensen JF, Fukuda M, Tiedje JM. Development of a Rhodococcus recombinant strain for degradation of products from anaerobic dechlorination of PCBs. Environmental Science & Technology. 35: 663-8. PMID 11349275 DOI: 10.1021/Es001308T |
0.44 |
|
| Show low-probability matches. |