Anshul Kundaje
Affiliations: | Computer Science | Stanford University, Palo Alto, CA |
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"Anshul Kundaje"Parents
Sign in to add mentor| Christina Leslie | grad student | 2008 | Columbia |
| Serafim Batzoglou | post-doc | 2008-2012 | Stanford |
| Manolis Kellis | research scientist | 2012-2014 | MIT (Computational Biology Tree) |
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Publications
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| Martyn GE, Montgomery MT, Jones H, et al. (2023) Rewriting regulatory DNA to dissect and reprogram gene expression. Biorxiv : the Preprint Server For Biology |
| Kuderna LFK, Ulirsch JC, Rashid S, et al. (2023) Identification of constrained sequence elements across 239 primate genomes. Nature |
| Gschwind AR, Mualim KS, Karbalayghareh A, et al. (2023) An encyclopedia of enhancer-gene regulatory interactions in the human genome. Biorxiv : the Preprint Server For Biology |
| DeGorter MK, Goddard PC, Karakoc E, et al. (2023) Transcriptomics and chromatin accessibility in multiple African population samples. Biorxiv : the Preprint Server For Biology |
| Marinov GK, Doughty B, Kundaje A, et al. (2023) The landscape of the histone-organized chromatin of Bdellovibrionota bacteria. Biorxiv : the Preprint Server For Biology |
| Nair S, Ameen M, Sundaram L, et al. (2023) Transcription factor stoichiometry, motif affinity and syntax regulate single-cell chromatin dynamics during fibroblast reprogramming to pluripotency. Biorxiv : the Preprint Server For Biology |
| Horton CA, Alexandari AM, Hayes MGB, et al. (2023) Short tandem repeats bind transcription factors to tune eukaryotic gene expression. Science (New York, N.Y.). 381: eadd1250 |
| Brennan KJ, Weilert M, Krueger S, et al. (2023) Chromatin accessibility in the Drosophila embryo is determined by transcription factor pioneering and enhancer activation. Developmental Cell |
| Hitz B, Lee JW, Jolanki O, et al. (2023) The ENCODE Uniform Analysis Pipelines. Research Square |
| Alexandari AM, Horton CA, Shrikumar A, et al. (2023) distillation of thermodynamic affinity from deep learning regulatory sequence models of protein-DNA binding. Biorxiv : the Preprint Server For Biology |