Vinhthuy T. Phan, Ph.D.
Affiliations: | 2003 | Stony Brook University, Stony Brook, NY, United States |
Area:
Algorithms, Computational Biology, Large-scale Text Analytics and Sentiment Analysis, Social Trends Analysis, Combinatorial Computing EnvironmentsGoogle:
"Vinhthuy Phan"Parents
Sign in to add mentor| Steven Skiena | grad student | 2003 | SUNY Stony Brook | |
| (Practical issues in metaheuristic combinatorial optimization.) | ||||
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Publications
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| Tran Q, Phan V. (2020) Assembling Reads Improves Taxonomic Classification of Species. Genes. 11 |
| Phan V, Pham DT, Melton C, et al. (2019) icHET: Interactive Visualization of Cytoplasmic Heteroplasmy. Bioinformatics (Oxford, England) |
| Vo NS, Phan V. (2018) Leveraging known genomic variants to improve detection of variants, especially close-by Indels. Bioinformatics (Oxford, England) |
| Tran Q, Pham DT, Phan V. (2017) Using 16S rRNA gene as marker to detect unknown bacteria in microbial communities. Bmc Bioinformatics. 18: 499 |
| Pham DT, Gao S, Phan V. (2017) An accurate and fast alignment-free method for profiling microbial communities. Journal of Bioinformatics and Computational Biology. 1740001 |
| Tran Q, Gao S, Phan V. (2016) Analysis of optimal alignments unfolds aligners' bias in existing variant profiles. Bmc Bioinformatics. 17: 349 |
| Phan V, Gao S, Tran Q, et al. (2015) How genome complexity can explain the difficulty of aligning reads to genomes. Bmc Bioinformatics. 16: S3 |
| Tran Q, Gao S, Vo NS, et al. (2015) A linear model for predicting performance of short-read aligners using genome complexity Bmc Bioinformatics. 16: 17 |
| Vo NS, Tran Q, Niraula N, et al. (2014) RandAL: a randomized approach to aligning DNA sequences to reference genomes. Bmc Genomics. 15: S2 |
| O’kello KL, Phan V. (2014) Determining gene response patterns of time series gene expression data using R Bmc Bioinformatics. 15 |