Saumyadipta Pyne, Ph.D.

Affiliations: 
2006 Stony Brook University, Stony Brook, NY, United States 
Area:
Algorithms, Computational Biology, Large-scale Text Analytics and Sentiment Analysis, Social Trends Analysis, Combinatorial Computing Environments
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"Saumyadipta Pyne"

Parents

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Steven Skiena grad student 2006 SUNY Stony Brook
 (Computational studies of gene expression and sequence data in yeast.)
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Publications

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Wang X, Pyne S, Dinu I. (2014) Gene set enrichment analysis for multiple continuous phenotypes. Bmc Bioinformatics. 15: 260
Oliva A, Rosebrock A, Ferrezuelo F, et al. (2013) Cluster Analysis of the Top 750 Cell Cycle–Regulated Genes Plos Biology
Gordân R, Pyne S, Bulyk ML. (2012) Identification of cell cycle-regulated, putative hyphal genes in Candida albicans. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 299-310
Fan X, Pyne S, Liu JS. (2010) Bayesian meta-analysis for identifying periodically expressed genes in fission yeast cell cycle Annals of Applied Statistics. 4: 988-1013
Pyne S, Gutman R, Kim CS, et al. (2009) Phase Coupled Meta-analysis: sensitive detection of oscillations in cell cycle gene expression, as applied to fission yeast. Bmc Genomics. 10: 440
Pyne S, Skiena S, Futcher B. (2007) Meta-Analysis of Microarray Data Bioinformatics Algorithms: Techniques and Applications. 329-352
Pyne S, Futcher B, Skiena S. (2006) Meta-analysis based on control of false discovery rate: combining yeast ChIP-chip datasets. Bioinformatics (Oxford, England). 22: 2516-22
Oliva A, Rosebrock A, Ferrezuelo F, et al. (2005) The cell cycle-regulated genes of Schizosaccharomyces pombe. Plos Biology. 3: e225
Pyne S, Skiena S, Futcher B. (2005) Copy correction and concerted evolution in the conservation of yeast genes. Genetics. 170: 1501-13
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