John Karanicolas
Affiliations: | 2008-2016 | University of Kansas, Lawrence, KS, United States | |
2016- | Fox Chase Cancer Center |
Website:
https://www.foxchase.org/john-karanicolasGoogle:
"John Karanicolas"Bio:
https://www.oxfordglobal.co.uk/discovery-series-virtual/speakers/john-karanicolas/
Parents
Sign in to add mentorCharles L. Brooks | grad student | 2003 | Scripps Institute (Chemistry Tree) | |
(Theoretical Studies in Protein Folding: WW Domains) | ||||
David Baker | post-doc | University of Washington |
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Publications
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Mischley V, Maier J, Chen J, et al. (2024) PPIscreenML: Structure-based screening for protein-protein interactions using AlphaFold. Biorxiv : the Preprint Server For Biology |
Lan L, Liu J, Xing M, et al. (2020) Identification and Validation of an Secondary Metabolite Derivative as an Inhibitor of the Musashi-RNA Interaction. Cancers. 12 |
Adeshina YO, Deeds EJ, Karanicolas J. (2020) Machine learning classification can reduce false positives in structure-based virtual screening. Proceedings of the National Academy of Sciences of the United States of America |
Leman JK, Weitzner BD, Lewis SM, et al. (2020) Macromolecular modeling and design in Rosetta: recent methods and frameworks. Nature Methods |
Post SJ, Keohane CE, Rossiter LM, et al. (2020) Target-Based Design of Promysalin Analogues Identifies a New Putative Binding Cleft in Succinate Dehydrogenase. Acs Infectious Diseases |
Khowsathit J, Bazzoli A, Cheng H, et al. (2020) Computational Design of an Allosteric Antibody Switch by Deletion and Rescue of a Complex Structural Constellation. Acs Central Science. 6: 390-403 |
Bai N, Roder H, Dickson A, et al. (2019) Isothermal Analysis of ThermoFluor Data can readily provide Quantitative Binding Affinities. Scientific Reports. 9: 2650 |
Wodak SJ, Paci E, Dokholyan NV, et al. (2019) Allostery in Its Many Disguises: From Theory to Applications. Structure (London, England : 1993) |
O'Neil PT, Machen AJ, Thompson JA, et al. (2019) Constructing Kinetically Controlled Denaturation Isotherms of Folded Proteins Using Denaturant-Pulse Chaperonin Binding. Methods in Molecular Biology (Clifton, N.J.). 1873: 293-304 |
Bazzoli A, Vance DJ, Rudolph MJ, et al. (2017) Using Homology Modeling to Interrogate Binding Affinity in Neutralization of Ricin Toxin by a Family of Single Domain Antibodies. Proteins |