Joshua A. Granek, Ph.D.

Affiliations: 
2006 Johns Hopkins University, Baltimore, MD 
Area:
Molecular Biology, Computer Science
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"Joshua Granek"

Parents

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Neil D. Clarke grad student 2006 Johns Hopkins
 (Computational and experimental analyses of transcriptional regulation as a function of DNA sequence.)
Paul M. Magwene post-doc Duke (Evolution Tree)
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Publications

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Sun S, Yadav V, Billmyre RB, et al. (2017) Fungal genome and mating system transitions facilitated by chromosomal translocations involving intercentromeric recombination. Plos Biology. 15: e2002527
Chow EW, Clancey SA, Billmyre RB, et al. (2017) Elucidation of the calcineurin-Crz1 stress response transcriptional network in the human fungal pathogen Cryptococcus neoformans. Plos Genetics. 13: e1006667
Esher SK, Granek JA, Alspaugh JA. (2015) Rapid mapping of insertional mutations to probe cell wall regulation in Cryptococcus neoformans. Fungal Genetics and Biology : Fg & B. 82: 9-21
Kokes M, Dunn JD, Granek JA, et al. (2015) Integrating chemical mutagenesis and whole-genome sequencing as a platform for forward and reverse genetic analysis of Chlamydia. Cell Host & Microbe. 17: 716-25
Granek JA, Murray D, Kayrkçi Ö, et al. (2013) The genetic architecture of biofilm formation in a clinical isolate of Saccharomyces cerevisiae. Genetics. 193: 587-600
Granek JA, Kayıkçı Ö, Magwene PM. (2011) Pleiotropic signaling pathways orchestrate yeast development. Current Opinion in Microbiology. 14: 676-81
Magwene PM, Kayıkçı Ö, Granek JA, et al. (2011) Outcrossing, mitotic recombination, and life-history trade-offs shape genome evolution in Saccharomyces cerevisiae. Proceedings of the National Academy of Sciences of the United States of America. 108: 1987-92
Granek JA, Magwene PM. (2010) Environmental and genetic determinants of colony morphology in yeast. Plos Genetics. 6: e1000823
Liu X, Lee CK, Granek JA, et al. (2006) Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection. Genome Research. 16: 1517-28
Granek JA, Clarke ND. (2005) Explicit equilibrium modeling of transcription-factor binding and gene regulation. Genome Biology. 6: R87
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