Prashanti Manda, Ph.D.

Affiliations: 
2012 Computer Science and Engineering Mississippi State University, Starkville, MS, United States 
Area:
Computer Science
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"Prashanti Manda"

Parents

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Todd J. Vision grad student UNC Chapel Hill (Evolution Tree)
Julia E. Hodges grad student 2012 Mississippi State University
 (Novel algorithms for cross-ontology multi-level data mining.)
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Publications

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Dahdul W, Manda P, Cui H, et al. (2018) Annotation of phenotypes using ontologies: a gold standard for the training and evaluation of natural language processing systems. Database : the Journal of Biological Databases and Curation. 2018
Manda P, Mungall CJ, Balhoff JP, et al. (2016) INVESTIGATING THE IMPORTANCE OF ANATOMICAL HOMOLOGY FOR CROSS-SPECIES PHENOTYPE COMPARISONS USING SEMANTIC SIMILARITY. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 21: 132-43
Manda P, Balhoff JP, Lapp H, et al. (2015) Using the phenoscape knowledgebase to relate genetic perturbations to phenotypic evolution. Genesis (New York, N.Y. : 2000). 53: 561-71
Manda P, McCarthy F, Bridges SM. (2013) Interestingness measures and strategies for mining multi-ontology multi-level association rules from gene ontology annotations for the discovery of new GO relationships. Journal of Biomedical Informatics. 46: 849-56
Manda P, Ozkan S, Wang H, et al. (2012) Cross-Ontology multi-level association rule mining in the Gene Ontology. Plos One. 7: e47411
McCarthy FM, Gresham CR, Buza TJ, et al. (2011) AgBase: supporting functional modeling in agricultural organisms. Nucleic Acids Research. 39: D497-506
Manda P, Freeman MG, Bridges SM, et al. (2010) GOModeler--a tool for hypothesis-testing of functional genomics datasets. Bmc Bioinformatics. 11: S29
van den Berg BH, Thanthiriwatte C, Manda P, et al. (2009) Comparing gene annotation enrichment tools for functional modeling of agricultural microarray data. Bmc Bioinformatics. 10: S9
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