S Hannenhalli

Affiliations: 
University of Pennsylvania, Philadelphia, PA, United States 
Area:
Bioinformatics Biology, Genetics, Computer Science
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"S Hannenhalli"
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Publications

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Sharmin M, Bravo HC, Hannenhalli S. (2016) Heterogeneity of transcription factor binding specificity models within and across cell lines. Genome Research
Sharmin M, Bravo HC, Hannenhalli S. (2015) Distinct genomic and epigenomic features demarcate hypomethylated blocks in colon cancer. Bmc Cancer. 16: 88
Kumar MS, Plotkin JB, Hannenhalli S. (2015) Regulated CRISPR Modules Exploit a Dual Defense Strategy of Restriction and Abortive Infection in a Model of Prokaryote-Phage Coevolution. Plos Computational Biology. 11: e1004603
Das A, Morley M, Moravec CS, et al. (2015) Bayesian integration of genetics and epigenetics detects causal regulatory SNPs underlying expression variability. Nature Communications. 6: 8555
Sarda S, Hannenhalli S. (2015) High-Throughput Identification of Cis-Regulatory Rewiring Events in Yeast. Molecular Biology and Evolution. 32: 3047-63
Kun Wang, Das A, Zheng-Mei Xiong, et al. (2015) Phenotype-Dependent Coexpression Gene Clusters: Application to Normal and Premature Ageing. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 12: 30-9
Rangarajan N, Kulkarni P, Hannenhalli S. (2015) Evolutionarily conserved network properties of intrinsically disordered proteins. Plos One. 10: e0126729
Liu Y, Morley M, Brandimarto J, et al. (2015) RNA-Seq identifies novel myocardial gene expression signatures of heart failure. Genomics. 105: 83-9
Wang K, Cao K, Hannenhalli S. (2015) Chromatin and genomic determinants of alternative splicing Bcb 2015 - 6th Acm Conference On Bioinformatics, Computational Biology, and Health Informatics. 345-354
Park SG, Hannenhalli S, Choi SS. (2014) Conservation in first introns is positively associated with the number of exons within genes and the presence of regulatory epigenetic signals. Bmc Genomics. 15: 526
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