James C. Costello, Ph.D.

Affiliations: 
2009 Informatics Indiana University, Bloomington, Bloomington, IN, United States 
Area:
Bioinformatics Biology, Information Science
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"James Costello"

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Mehmet M. Dalkilic grad student 2009 Indiana University
 (Data integration and applications of functional gene networks in Drosophila melanogaster.)
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Publications

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Saez-Rodriguez J, Costello JC, Friend SH, et al. (2016) Crowdsourcing biomedical research: leveraging communities as innovation engines. Nature Reviews. Genetics. 17: 470-86
Cokelaer T, Bansal M, Bare C, et al. (2015) DREAMTools: a Python package for scoring collaborative challenges. F1000research. 4: 1030
Ergun A, Doran G, Costello JC, et al. (2013) Differential splicing across immune system lineages. Proceedings of the National Academy of Sciences of the United States of America. 110: 14324-9
Kalghatgi S, Spina CS, Costello JC, et al. (2013) Bactericidal antibiotics induce mitochondrial dysfunction and oxidative damage in Mammalian cells. Science Translational Medicine. 5: 192ra85
Costello JC, Stolovitzky G. (2013) Seeking the wisdom of crowds through challenge-based competitions in biomedical research. Clinical Pharmacology and Therapeutics. 93: 396-8
Kwong LN, Costello JC, Liu H, et al. (2012) Oncogenic NRAS signaling differentially regulates survival and proliferation in melanoma. Nature Medicine. 18: 1503-10
Marbach D, Costello JC, Küffner R, et al. (2012) Wisdom of crowds for robust gene network inference. Nature Methods. 9: 796-804
Kijimoto T, Costello J, Tang Z, et al. (2009) EST and microarray analysis of horn development in Onthophagus beetles. Bmc Genomics. 10: 504
Costello JC, Dalkilic MM, Beason SM, et al. (2009) Gene networks in Drosophila melanogaster: integrating experimental data to predict gene function. Genome Biology. 10: R97
Schrider DR, Costello JC, Hahn MW. (2009) All human-specific gene losses are present in the genome as pseudogenes. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 16: 1419-27
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