Zafer Aydin, Ph.D.

Affiliations: 
2008 Georgia Institute of Technology, Atlanta, GA 
Area:
Electronics and Electrical Engineering, Bioinformatics Biology
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"Zafer Aydin"

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Yucel Altunbasak grad student 2008 Georgia Tech
 (Bayesian models and algorithms for protein secondary structure and beta-sheet prediction.)
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Publications

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Aydin Z, Singh A, Bilmes J, et al. (2011) Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure. Bmc Bioinformatics. 12: 154
Aydin Z, Altunbasak Y, Erdogan H. (2011) Bayesian models and algorithms for protein β-sheet prediction. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 8: 395-409
Aydin Z, Murray JI, Waterston RH, et al. (2010) Using machine learning to speed up manual image annotation: application to a 3D imaging protocol for measuring single cell gene expression in the developing C. elegans embryo. Bmc Bioinformatics. 11: 84
Aydin Z, Altunbasak Y, Pakatci IK, et al. (2007) Training set reduction methods for protein secondary structure prediction in single-sequence condition. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2007: 5025-8
Aydin Z, Altunbasak Y, Erdogan H. (2007) Bayesian protein secondary structure prediction with near-optimal segmentations Ieee Transactions On Signal Processing. 55: 3512-3525
Pakatci IK, Aydin Z, Erdoǧan H, et al. (2007) Training set reduction methods for single sequence protein secondary structure prediction 2007 Ieee 15th Signal Processing and Communications Applications, Siu
Aydin Z, Erdogan H, Altunbasak Y. (2007) Protein fold recognition using residue-based alignments of sequence and secondary structure Icassp, Ieee International Conference On Acoustics, Speech and Signal Processing - Proceedings. 1
Aydin Z, Altunbasak Y, Borodovsky M. (2006) Protein secondary structure prediction for a single-sequence using hidden semi-Markov models. Bmc Bioinformatics. 7: 178
Aydin Z, Altunbasak Y. (2006) A signal processing application in genomic research: Protein secondary structure prediction Ieee Signal Processing Magazine. 23: 128-131
Aydin Z, Akgun T, Altunbasak Y. (2005) A modified stack decoder for protein secondary structure prediction Icassp, Ieee International Conference On Acoustics, Speech and Signal Processing - Proceedings. IV737-IV740
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