Raja Jothi, Ph.D.

Affiliations: 
2004 University of Texas at Dallas, Richardson, TX, United States 
Area:
Computer Science, Operations Research
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"Raja Jothi"

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Balaji Raghavachari grad student 2004 UT Dallas
 (Approximation algorithms for single -sink edge installation problems and other graph problems.)
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Publications

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Hoffman NJ, Parker BL, Chaudhuri R, et al. (2015) Global Phosphoproteomic Analysis of Human Skeletal Muscle Reveals a Network of Exercise-Regulated Kinases and AMPK Substrates. Cell Metabolism
Yang P, Zheng X, Jayaswal V, et al. (2015) Knowledge-Based Analysis for Detecting Key Signaling Events from Time-Series Phosphoproteomics Data. Plos Computational Biology. 11: e1004403
Pathania R, Ramachandran S, Elangovan S, et al. (2015) DNMT1 is essential for mammary and cancer stem cell maintenance and tumorigenesis. Nature Communications. 6: 6910
Hoffman NJ, Parker BL, Chaudhuri R, et al. (2015) Global Phosphoproteomic Analysis of Human Skeletal Muscle Reveals a Network of Exercise-Regulated Kinases and AMPK Substrates Cell Metabolism. 22: 922-935
Oldfield A, Yang P, Conway A, et al. (2014) Histone-Fold Domain Protein NF-Y Promotes Chromatin Accessibility for Cell Type-Specific Master Transcription Factors Molecular Cell. 55: 708-722
Takeda Y, Kang HS, Freudenberg J, et al. (2014) Retinoic acid-related orphan receptor γ (RORγ): a novel participant in the diurnal regulation of hepatic gluconeogenesis and insulin sensitivity. Plos Genetics. 10: e1004331
Wang L, Du Y, Ward JM, et al. (2014) INO80 facilitates pluripotency gene activation in embryonic stem cell self-renewal, reprogramming, and blastocyst development. Cell Stem Cell. 14: 575-91
Cinghu S, Yellaboina S, Freudenberg JM, et al. (2014) Integrative framework for identification of key cell identity genes uncovers determinants of ES cell identity and homeostasis. Proceedings of the National Academy of Sciences of the United States of America. 111: E1581-90
Lackford B, Yao C, Charles GM, et al. (2014) Fip1 regulates mRNA alternative polyadenylation to promote stem cell self-renewal. The Embo Journal. 33: 878-89
Li R, Mav D, Grimm SA, et al. (2014) Fine-tuning of epigenetic regulation with respect to promoter CpG content in a cell type-specific manner. Epigenetics. 9: 747-59
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