Roland Dunbrack, Ph.D.

Computer and Information Science Temple University, Philadelphia, PA, United States 
Information Science, Computer Science, Bioinformatics Biology
"Roland Dunbrack"


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Martin Karplus grad student 1987-1993 Harvard (Chemistry Tree)
Fred Cohen post-doc UCSF (Neurotree)


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Jared Adolf-Bryfogle grad student (Microtree)
Brian Weitzner grad student Johns Hopkins (Computational Biology Tree)
Qifang Xu grad student Temple University (Computational Biology Tree)
Joanna S. Slusky post-doc Fox Chase Cancer Center (Chemistry Tree)
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Kelow SP, Adolf-Bryfogle J, Dunbrack RL. (2020) Hiding in plain sight: structure and sequence analysis reveals the importance of the antibody DE loop for antibody-antigen binding. Mabs. 12: 1840005
Leman JK, Weitzner BD, Lewis SM, et al. (2020) Macromolecular modeling and design in Rosetta: recent methods and frameworks. Nature Methods
Shapovalov M, Dunbrack RL, Vucetic S. (2020) Multifaceted analysis of training and testing convolutional neural networks for protein secondary structure prediction. Plos One. 15: e0232528
Koehler Leman J, Weitzner BD, Renfrew PD, et al. (2020) Better together: Elements of successful scientific software development in a distributed collaborative community. Plos Computational Biology. 16: e1007507
Xu Q, Dunbrack RL. (2020) ProtCID: a data resource for structural information on protein interactions. Nature Communications. 11: 711
Modi V, Dunbrack RL. (2019) A Structurally-Validated Multiple Sequence Alignment of 497 Human Protein Kinase Domains. Scientific Reports. 9: 19790
Clark WT, Kasak L, Bakolitsa C, et al. (2019) Assessment of predicted enzymatic activity of alpha-N-acetylglucosaminidase (NAGLU) variants of unknown significance for CAGI 2016. Human Mutation
Kueppers F, Andrake MD, Xu Q, et al. (2019) Protein modeling to assess the pathogenicity of rare variants of SERPINA1 in patients suspected of having Alpha 1 Antitrypsin Deficiency. Bmc Medical Genetics. 20: 125
Xu Q, Dunbrack RL. (2019) Principles and characteristics of biological assemblies in experimentally determined protein structures. Current Opinion in Structural Biology. 55: 34-49
Modi V, Dunbrack RL. (2019) Defining a new nomenclature for the structures of active and inactive kinases. Proceedings of the National Academy of Sciences of the United States of America
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