Nicholas A. Furlotte, Ph.D. - Publications

Affiliations: 
2013 Computer Science 0201 University of California, Los Angeles, Los Angeles, CA 
Area:
bioinformatics; computational biology; machine learning

30/57 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Kang EY, Lee CH, Furlotte NA, Joo JWJ, Kostem E, Zaitlen N, Eskin E, Han B. An Association Mapping Framework To Account for Potential Sex Difference in Genetic Architectures. Genetics. PMID 29752291 DOI: 10.1534/Genetics.117.300501  1
2016 Gormley P, Anttila V, Winsvold BS, Palta P, Esko T, Pers TH, Farh KH, Cuenca-Leon E, Muona M, Furlotte NA, Kurth T, Ingason A, McMahon G, Ligthart L, Terwindt GM, et al. Meta-analysis of 375,000 individuals identifies 38 susceptibility loci for migraine. Nature Genetics. PMID 27322543 DOI: 10.1038/Ng.3598  1
2016 Okbay A, Beauchamp JP, Fontana MA, Lee JJ, Pers TH, Rietveld CA, Turley P, Chen GB, Emilsson V, Meddens SF, Oskarsson S, Pickrell JK, Thom K, Timshel P, de Vlaming R, ... ... Furlotte NA, et al. Genome-wide association study identifies 74 loci associated with educational attainment. Nature. 533: 539-42. PMID 27225129 DOI: 10.1038/Nature17671  1
2016 Okbay A, Baselmans BM, De Neve JE, Turley P, Nivard MG, Fontana MA, Meddens SF, Linnér RK, Rietveld CA, Derringer J, Gratten J, Lee JJ, Liu JZ, de Vlaming R, Ahluwalia TS, ... ... Furlotte NA, et al. Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses. Nature Genetics. PMID 27089181 DOI: 10.1038/Ng.3552  1
2016 Sul JH, Bilow M, Yang WY, Kostem E, Furlotte N, He D, Eskin E. Accounting for Population Structure in Gene-by-Environment Interactions in Genome-Wide Association Studies Using Mixed Models. Plos Genetics. 12: e1005849. PMID 26943367 DOI: 10.1371/Journal.Pgen.1005849  1
2015 Orozco LD, Morselli M, Rubbi L, Guo W, Go J, Shi H, Lopez D, Furlotte NA, Bennett BJ, Farber CR, Ghazalpour A, Zhang MQ, Bahous R, Rozen R, Lusis AJ, et al. Epigenome-wide association of liver methylation patterns and complex metabolic traits in mice. Cell Metabolism. 21: 905-17. PMID 26039453 DOI: 10.1016/J.Cmet.2015.04.025  1
2015 Furlotte NA, Eskin E. Efficient multiple-trait association and estimation of genetic correlation using the matrix-variate linear mixed model. Genetics. 200: 59-68. PMID 25724382 DOI: 10.1534/Genetics.114.171447  1
2015 Campbell CL, Furlotte NA, Eriksson N, Hinds D, Auton A. Escape from crossover interference increases with maternal age. Nature Communications. 6: 6260. PMID 25695863 DOI: 10.1038/Ncomms7260  1
2015 Joo JWJ, Kang EY, Org E, Furlotte N, Parks B, Lusis AJ, Eskin E. Efficient and accurate multiple-phenotypes regression method for high dimensional data considering population structure Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 9029: 136-153. DOI: 10.1007/978-3-319-16706-0_15  1
2014 Furlotte NA, Heckerman D, Lippert C. Quantifying the uncertainty in heritability. Journal of Human Genetics. 59: 269-75. PMID 24670270 DOI: 10.1038/jhg.2014.15  1
2014 He D, Furlotte NA, Hormozdiari F, Joo JW, Wadia A, Ostrovsky R, Sahai A, Eskin E. Identifying genetic relatives without compromising privacy. Genome Research. 24: 664-72. PMID 24614977 DOI: 10.1101/Gr.153346.112  1
2014 Kang EY, Han B, Furlotte N, Joo JW, Shih D, Davis RC, Lusis AJ, Eskin E. Meta-analysis identifies gene-by-environment interactions as demonstrated in a study of 4,965 mice. Plos Genetics. 10: e1004022. PMID 24415945 DOI: 10.1371/Journal.Pgen.1004022  1
2012 Ghazalpour A, Rau CD, Farber CR, Bennett BJ, Orozco LD, van Nas A, Pan C, Allayee H, Beaven SW, Civelek M, Davis RC, Drake TA, Friedman RA, Furlotte N, Hui ST, et al. Hybrid mouse diversity panel: a panel of inbred mouse strains suitable for analysis of complex genetic traits. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 23: 680-92. PMID 22892838 DOI: 10.1007/S00335-012-9411-5  1
2012 Furlotte NA, Eskin E, Eyheramendy S. Genome-wide association mapping with longitudinal data. Genetic Epidemiology. 36: 463-71. PMID 22581622 DOI: 10.1002/Gepi.21640  1
2012 Furlotte NA, Kang EY, Van Nas A, Farber CR, Lusis AJ, Eskin E. Increasing association mapping power and resolution in mouse genetic studies through the use of meta-analysis for structured populations. Genetics. 191: 959-67. PMID 22505625 DOI: 10.1534/Genetics.112.140277  1
2011 Keane TM, Goodstadt L, Danecek P, White MA, Wong K, Yalcin B, Heger A, Agam A, Slater G, Goodson M, Furlotte NA, Eskin E, NellÃ¥ker C, Whitley H, Cleak J, et al. Mouse genomic variation and its effect on phenotypes and gene regulation. Nature. 477: 289-94. PMID 21921910 DOI: 10.1038/Nature10413  1
2011 Ghazalpour A, Bennett B, Petyuk VA, Orozco L, Hagopian R, Mungrue IN, Farber CR, Sinsheimer J, Kang HM, Furlotte N, Park CC, Wen PZ, Brewer H, Weitz K, Camp DG, et al. Comparative analysis of proteome and transcriptome variation in mouse. Plos Genetics. 7: e1001393. PMID 21695224 DOI: 10.1371/Journal.Pgen.1001393  1
2011 Furlotte NA, Kang HM, Ye C, Eskin E. Mixed-model coexpression: calculating gene coexpression while accounting for expression heterogeneity. Bioinformatics (Oxford, England). 27: i288-94. PMID 21685083 DOI: 10.1093/bioinformatics/btr221  1
2011 Xu L, Furlotte N, Lin Y, Heinrich K, Berry MW, George EO, Homayouni R. Functional cohesion of gene sets determined by latent semantic indexing of PubMed abstracts. Plos One. 6: e18851. PMID 21533142 DOI: 10.1371/Journal.Pone.0018851  1
2011 Van Tyne D, Park DJ, Schaffner SF, Neafsey DE, Angelino E, Cortese JF, Barnes KG, Rosen DM, Lukens AK, Daniels RF, Milner DA, Johnson CA, Shlyakhter I, Grossman SR, Becker JS, ... ... Furlotte NA, et al. Identification and functional validation of the novel antimalarial resistance locus PF10_0355 in Plasmodium falciparum. Plos Genetics. 7: e1001383. PMID 21533027 DOI: 10.1371/Journal.Pgen.1001383  1
2011 He D, Hormozdiari F, Furlotte N, Eskin E. Efficient algorithms for tandem copy number variation reconstruction in repeat-rich regions. Bioinformatics (Oxford, England). 27: 1513-20. PMID 21505028 DOI: 10.1093/Bioinformatics/Btr169  1
2011 Farber CR, Bennett BJ, Orozco L, Zou W, Lira A, Kostem E, Kang HM, Furlotte N, Berberyan A, Ghazalpour A, Suwanwela J, Drake TA, Eskin E, Wang QT, Teitelbaum SL, et al. Mouse genome-wide association and systems genetics identify Asxl2 as a regulator of bone mineral density and osteoclastogenesis. Plos Genetics. 7: e1002038. PMID 21490954 DOI: 10.1371/Journal.Pgen.1002038  1
2011 Furlotte NA, Xu L, Williams RW, Homayouni R. Literature-based evaluation of microarray normalization procedures Proceedings - 2011 Ieee International Conference On Bioinformatics and Biomedicine, Bibm 2011. 608-612. DOI: 10.1109/BIBM.2011.114  1
2010 He D, Furlotte N, Eskin E. Detection and reconstruction of tandemly organized de novo copy number variations. Bmc Bioinformatics. 11: S12. PMID 21172047 DOI: 10.1186/1471-2105-11-S11-S12  1
2010 Kirby A, Kang HM, Wade CM, Cotsapas C, Kostem E, Han B, Furlotte N, Kang EY, Rivas M, Bogue MA, Frazer KA, Johnson FM, Beilharz EJ, Cox DR, Eskin E, et al. Fine mapping in 94 inbred mouse strains using a high-density haplotype resource. Genetics. 185: 1081-95. PMID 20439770 DOI: 10.1534/Genetics.110.115014  1
2010 Bennett BJ, Farber CR, Orozco L, Kang HM, Ghazalpour A, Siemers N, Neubauer M, Neuhaus I, Yordanova R, Guan B, Truong A, Yang WP, He A, Kayne P, Gargalovic P, ... ... Furlotte N, et al. A high-resolution association mapping panel for the dissection of complex traits in mice. Genome Research. 20: 281-90. PMID 20054062 DOI: 10.1101/Gr.099234.109  1
2009 Viangteeravat T, Brooks IM, Ketcherside WJ, Houmayouni R, Furlotte N, Vuthipadadon S, McDonald CS. Biomedical Informatics Unit (BMIU): Slim-prim system bridges the gap between laboratory discovery and practice. Clinical and Translational Science. 2: 238-41. PMID 20443897 DOI: 10.1111/J.1752-8062.2009.00109.X  1
2009 Viangteeravat T, Brooks IM, Smith EJ, Furlotte N, Vuthipadadon S, Reynolds R, McDonald CS. Slim-prim: a biomedical informatics database to promote translational research. Perspectives in Health Information Management / Ahima, American Health Information Management Association. 6: 6. PMID 19471646  1
2009 Xu L, Homayouni R, Furlotte NA, Heinrich KE, George EO, Berry MW. Gene-set Cohesion Analysis Tool (GCAT): A literature based web tool for calculating functional cohesiveness of gene groups Proceedings - 2009 Ieee International Conference On Bioinformatics and Biomedicine Workshops, Bibmw 2009. 349. DOI: 10.1109/BIBMW.2009.5332068  1
2008 Phan V, Furlotte NA. Motif Tool Manager: a web-based framework for motif discovery. Bioinformatics (Oxford, England). 24: 2930-1. PMID 19017656 DOI: 10.1093/Bioinformatics/Btn559  1
Low-probability matches
2021 Simcoe M, Valdes A, Liu F, Furlotte NA, Evans DM, Hemani G, Ring SM, Smith GD, Duffy DL, Zhu G, Gordon SD, Medland SE, Vuckovic D, Girotto G, Sala C, et al. Genome-wide association study in almost 195,000 individuals identifies 50 previously unidentified genetic loci for eye color. Science Advances. 7. PMID 33692100 DOI: 10.1126/sciadv.abd1239  0.01
2021 Fontanillas P, Alipanahi B, Furlotte NA, Johnson M, Wilson CH, Pitts SJ, Gentleman R, Auton A. Disease risk scores for skin cancers. Nature Communications. 12: 160. PMID 33420020 DOI: 10.1038/s41467-020-20246-5  0.01
2020 Elson SL, Furlotte NA, Hromatka BS, Wilson CH, Mountain JL, Rowbotham HM, Varga EA, Francke U. Direct-to-consumer genetic testing for factor V Leiden and prothrombin 20210G>A: the consumer experience. Molecular Genetics & Genomic Medicine. e1468. PMID 32940023 DOI: 10.1002/Mgg3.1468  0.01
2020 Guo Y, Rist PM, Daghlas I, Giulianini F, Kurth T, Chasman DI. A genome-wide cross-phenotype meta-analysis of the association of blood pressure with migraine. Nature Communications. 11: 3368. PMID 32632093 DOI: 10.1038/S41467-020-17002-0  0.01
2019 Nalls MA, Blauwendraat C, Vallerga CL, Heilbron K, Bandres-Ciga S, Chang D, Tan M, Kia DA, Noyce AJ, Xue A, Bras J, Young E, von Coelln R, Simón-Sánchez J, Schulte C, et al. Identification of novel risk loci, causal insights, and heritable risk for Parkinson's disease: a meta-analysis of genome-wide association studies. The Lancet. Neurology. 18: 1091-1102. PMID 31701892 DOI: 10.1016/S1474-4422(19)30320-5  0.01
2019 Nakka P, Pattillo Smith S, O'Donnell-Luria AH, McManus KF, Mountain JL, Ramachandran S, Sathirapongsasuti JF. Characterization of Prevalence and Health Consequences of Uniparental Disomy in Four Million Individuals from the General Population. American Journal of Human Genetics. PMID 31607426 DOI: 10.1016/J.Ajhg.2019.09.016  0.01
2019 Gazal S, Finucane HK, Furlotte NA, Loh PR, Palamara PF, Liu X, Schoech A, Bulik-Sullivan B, Neale BM, Gusev A, Price AL. Author Correction: Linkage disequilibrium-dependent architecture of human complex traits shows action of negative selection. Nature Genetics. PMID 31273336 DOI: 10.1038/S41588-019-0468-X  0.04
2019 Turley P, Walters RK, Maghzian O, Okbay A, Lee JJ, Fontana MA, Nguyen-Viet TA, Wedow R, Zacher M, Furlotte NA, Magnusson P, Oskarsson S, Johannesson M, et al. Author Correction: Multi-trait analysis of genome-wide association summary statistics using MTAG. Nature Genetics. PMID 31239548 DOI: 10.1038/s41588-019-0469-9  0.01
2019 Hysi PG, Valdes AM, Liu F, Furlotte NA, Evans DM, Bataille V, Visconti A, Hemani G, McMahon G, Ring SM, Smith GD, Duffy DL, Zhu G, Gordon SD, Medland SE, et al. Publisher Correction: Genome-wide association meta-analysis of individuals of European ancestry identifies new loci explaining a substantial fraction of hair color variation and heritability. Nature Genetics. PMID 31150021 DOI: 10.1038/S41588-019-0446-3  0.01
2019 Turley P, Walters RK, Maghzian O, Okbay A, Lee JJ, Fontana MA, Nguyen-Viet TA, Wedow R, Zacher M, Furlotte NA, Magnusson P, Oskarsson S, Johannesson M, et al. Publisher Correction: Multi-trait analysis of genome-wide association summary statistics using MTAG. Nature Genetics. PMID 31147634 DOI: 10.1038/S41588-019-0444-5  0.01
2018 Broman KW, Gatti DM, Simecek P, Furlotte NA, Prins P, Sen Ś, Yandell BS, Churchill GA. R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multi-parent Populations. Genetics. PMID 30591514 DOI: 10.1534/Genetics.118.301595  0.01
2018 Ioannidis NM, Wang W, Furlotte NA, Hinds DA, Bustamante CD, Jorgenson E, Asgari MM, Whittemore AS. Gene expression imputation identifies candidate genes and susceptibility loci associated with cutaneous squamous cell carcinoma. Nature Communications. 9: 4264. PMID 30323283 DOI: 10.1038/S41467-018-06149-6  0.01
2018 Gormley P, Kurki MI, Hiekkala ME, Veerapen K, Häppölä P, Mitchell AA, Lal D, Palta P, Surakka I, Kaunisto MA, Hämäläinen E, Vepsäläinen S, Havanka H, Harno H, Ilmavirta M, et al. Common Variant Burden Contributes to the Familial Aggregation of Migraine in 1,589 Families. Neuron. 99: 1098. PMID 30189203 DOI: 10.1016/J.Neuron.2018.08.029  0.01
2018 Lee JJ, Wedow R, Okbay A, Kong E, Maghzian O, Zacher M, Nguyen-Viet TA, Bowers P, Sidorenko J, Karlsson Linnér R, Fontana MA, Kundu T, Lee C, Li H, Li R, ... ... Furlotte NA, et al. Gene discovery and polygenic prediction from a genome-wide association study of educational attainment in 1.1 million individuals. Nature Genetics. PMID 30038396 DOI: 10.1038/S41588-018-0147-3  0.01
2018 Anttila V, Bulik-Sullivan B, Finucane HK, Walters RK, Bras J, Duncan L, Escott-Price V, Falcone GJ, Gormley P, Malik R, Patsopoulos NA, Ripke S, Wei Z, Yu D, ... ... Furlotte N, et al. Analysis of shared heritability in common disorders of the brain. Science (New York, N.Y.). 360. PMID 29930110 DOI: 10.1126/Science.Aap8757  0.01
2018 Tedja MS, Wojciechowski R, Hysi PG, Eriksson N, Furlotte NA, Verhoeven VJM, Iglesias AI, Meester-Smoor MA, Tompson SW, Fan Q, Khawaja AP, Cheng CY, Höhn R, Yamashiro K, Wenocur A, et al. Genome-wide association meta-analysis highlights light-induced signaling as a driver for refractive error. Nature Genetics. PMID 29808027 DOI: 10.1038/s41588-018-0127-7  0.01
2018 Gormley P, Kurki MI, Hiekkala ME, Veerapen K, Häppölä P, Mitchell AA, Lal D, Palta P, Surakka I, Kaunisto MA, Hämäläinen E, Vepsäläinen S, Havanka H, Harno H, Ilmavirta M, et al. Common Variant Burden Contributes to the Familial Aggregation of Migraine in 1,589 Families. Neuron. PMID 29731251 DOI: 10.1016/J.Neuron.2018.04.014  0.01
2018 Hysi PG, Valdes AM, Liu F, Furlotte NA, Evans DM, Bataille V, Visconti A, Hemani G, McMahon G, Ring SM, Smith GD, Duffy DL, Zhu G, Gordon SD, Medland SE, et al. Genome-wide association meta-analysis of individuals of European ancestry identifies new loci explaining a substantial fraction of hair color variation and heritability. Nature Genetics. PMID 29662168 DOI: 10.1038/S41588-018-0100-5  0.01
2018 Turley P, Walters RK, Maghzian O, Okbay A, Lee JJ, Fontana MA, Nguyen-Viet TA, Wedow R, Zacher M, Furlotte NA, Magnusson P, Oskarsson S, Johannesson M, Visscher PM, Laibson D, et al. Multi-trait analysis of genome-wide association summary statistics using MTAG. Nature Genetics. PMID 29292387 DOI: 10.1038/S41588-017-0009-4  0.01
2017 Schormair B, Zhao C, Bell S, Tilch E, Salminen AV, Pütz B, Dauvilliers Y, Stefani A, Högl B, Poewe W, Kemlink D, Sonka K, Bachmann CG, Paulus W, Trenkwalder C, et al. Identification of novel risk loci for restless legs syndrome in genome-wide association studies in individuals of European ancestry: a meta-analysis. The Lancet. Neurology. 16: 898-907. PMID 29029846 DOI: 10.1016/S1474-4422(17)30327-7  0.01
2017 Gazal S, Finucane HK, Furlotte NA, Loh PR, Palamara PF, Liu X, Schoech A, Bulik-Sullivan B, Neale BM, Gusev A, Price AL. Linkage disequilibrium-dependent architecture of human complex traits shows action of negative selection. Nature Genetics. PMID 28892061 DOI: 10.1038/Ng.3954  0.01
2017 Boutwell B, Hinds D, Tielbeek J, Ong KK, Day FR, Perry JRB. Replication and characterization of CADM2 and MSRA genes on human behavior. Heliyon. 3: e00349. PMID 28795158 DOI: 10.1016/J.Heliyon.2017.E00349  0.01
2016 Okbay A, Baselmans BM, De Neve JE, Turley P, Nivard MG, Fontana MA, Meddens SF, Linnér RK, Rietveld CA, Derringer J, Gratten J, Lee JJ, Liu JZ, de Vlaming R, Ahluwalia TS, ... ... Furlotte NA, et al. Corrigendum: Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses. Nature Genetics. 48: 1591. PMID 27898078 DOI: 10.1038/Ng1216-1587B  0.01
2016 Gormley P, Anttila V, Winsvold BS, Palta P, Esko T, Pers TH, Farh KH, Cuenca-Leon E, Muona M, Furlotte NA, Kurth T, Ingason A, McMahon G, Ligthart L, Terwindt GM, et al. Corrigendum: Meta-analysis of 375,000 individuals identifies 38 susceptibility loci for migraine. Nature Genetics. 48: 1296. PMID 27681292 DOI: 10.1038/Ng1016-1296C  0.01
2016 Okbay A, Baselmans BM, Neve JE, Turley P, Nivard MG, Fontana MA, Meddens SF, Linnér RK, Rietveld CA, Derringer J, Gratten J, Lee JJ, Liu JZ, de Vlaming R, Ahluwalia TS, ... ... Furlotte NA, et al. Corrigendum: Genetic variants associated with subjective well-being, depressive symptoms, and neuroticism identified through genome-wide analyses. Nature Genetics. 48: 970. PMID 27463399 DOI: 10.1038/ng0816-970c  0.01
2016 Jones AV, Hockley JR, Hyde C, Gorman D, Sredic-Rhodes A, Bilsland J, McMurray G, Furlotte NA, Hu Y, Hinds DA, Cox PJ, Scollen S. Genome-wide association analysis of pain severity in dysmenorrhea identifies association at chromosome 1p13.2, near the nerve growth factor locus. Pain. PMID 27454463 DOI: 10.1097/J.Pain.0000000000000678  0.01
2016 Sloan Z, Arends D, W. Broman K, Centeno A, Furlotte N, Nijveen H, Yan L, Zhou X, W. Williams R, Prins P. GeneNetwork: framework for web-based genetics The Journal of Open Source Software. 1: 25. DOI: 10.21105/Joss.00025  0.01
Hide low-probability matches.