Jae H. Sul, Ph.D. - Publications

Affiliations: 
2013 Computer Science University of California, Los Angeles, Los Angeles, CA 
Area:
bioinformatics; computational biology; machine learning

0/70 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
Low-probability matches
2020 Jew B, Alvarez M, Rahmani E, Miao Z, Ko A, Garske KM, Sul JH, Pietiläinen KH, Pajukanta P, Halperin E. Publisher Correction: Accurate estimation of cell composition in bulk expression through robust integration of single-cell information. Nature Communications. 11: 2891. PMID 32493922 DOI: 10.1038/S41467-020-16607-9  0.16
2020 Jew B, Alvarez M, Rahmani E, Miao Z, Ko A, Garske KM, Sul JH, Pietiläinen KH, Pajukanta P, Halperin E. Accurate estimation of cell composition in bulk expression through robust integration of single-cell information. Nature Communications. 11: 1971. PMID 32332754 DOI: 10.1038/S41467-020-15816-6  0.16
2020 Jung YJ, Kim HK, Cho Y, Choi JS, Woo CH, Lee KS, Sul JH, Lee CM, Han J, Park JH, Jo DG, Cho YW. Cell reprogramming using extracellular vesicles from differentiating stem cells into white/beige adipocytes. Science Advances. 6: eaay6721. PMID 32232152 DOI: 10.1126/Sciadv.Aay6721  0.01
2020 Sul JH, Service SK, Huang AY, Ramensky V, Hwang SG, Teshiba TM, Park Y, Ori APS, Zhang Z, Mullins N, Olde Loohuis LM, Fears SC, Araya C, Araya X, Spesny M, et al. Contribution of common and rare variants to bipolar disorder susceptibility in extended pedigrees from population isolates. Translational Psychiatry. 10: 74. PMID 32094344 DOI: 10.1038/S41398-020-0758-1  0.12
2019 Li J, Jew B, Zhan L, Hwang S, Coppola G, Freimer NB, Sul JH. ForestQC: Quality control on genetic variants from next-generation sequencing data using random forest. Plos Computational Biology. 15: e1007556. PMID 31851693 DOI: 10.1371/Journal.Pcbi.1007556  0.16
2019 Zou J, Hormozdiari F, Jew B, Castel SE, Lappalainen T, Ernst J, Sul JH, Eskin E. Leveraging allelic imbalance to refine fine-mapping for eQTL studies. Plos Genetics. 15: e1008481. PMID 31834882 DOI: 10.1371/Journal.Pgen.1008481  0.76
2019 Bahn G, Park JS, Yun UJ, Lee YJ, Choi Y, Park JS, Baek SH, Choi BY, Cho YS, Kim HK, Han J, Sul JH, Baik SH, Lim J, Wakabayashi N, et al. NRF2/ARE pathway negatively regulates BACE1 expression and ameliorates cognitive deficits in mouse Alzheimer's models. Proceedings of the National Academy of Sciences of the United States of America. PMID 31164420 DOI: 10.1073/Pnas.1819541116  0.01
2019 Yu D, Sul JH, Tsetsos F, Nawaz MS, Huang AY, Zelaya I, Illmann C, Osiecki L, Darrow SM, Hirschtritt ME, Greenberg E, Muller-Vahl KR, Stuhrmann M, Dion Y, Rouleau G, et al. Interrogating the Genetic Determinants of Tourette's Syndrome and Other Tic Disorders Through Genome-Wide Association Studies. The American Journal of Psychiatry. 176: 217-227. PMID 30818990 DOI: 10.1176/Appi.Ajp.2018.18070857  0.12
2019 Jew B, Sul JH. Variant calling and quality control of large-scale human genome sequencing data Emerging Topics in Life Sciences. 3: 399-409. DOI: 10.1042/ETLS20190007  0.01
2018 Sul JH, Martin LS, Eskin E. Population structure in genetic studies: Confounding factors and mixed models. Plos Genetics. 14: e1007309. PMID 30589851 DOI: 10.1371/Journal.Pgen.1007309  0.76
2018 Mooney JA, Huber CD, Service S, Sul JH, Marsden CD, Zhang Z, Sabatti C, Ruiz-Linares A, Bedoya G, Freimer N, Lohmueller KE. Understanding the Hidden Complexity of Latin American Population Isolates. American Journal of Human Genetics. 103: 707-726. PMID 30401458 DOI: 10.1016/J.Ajhg.2018.09.013  0.12
2018 Choi BY, Choi Y, Park JS, Kang LJ, Baek SH, Park JS, Bahn G, Cho Y, Kim HK, Han J, Sul JH, Baik SH, Hyun DH, Arumugam TV, Yang S, et al. Inhibition of Notch1 induces population and suppressive activity of regulatory T cell in inflammatory arthritis. Theranostics. 8: 4795-4804. PMID 30279738 DOI: 10.7150/Thno.26093  0.01
2018 Barbeira AN, Dickinson SP, Bonazzola R, Zheng J, Wheeler HE, Torres JM, Torstenson ES, Shah KP, Garcia T, Edwards TL, Stahl EA, Huckins LM, Nicolae DL, Cox NJ, et al. Exploring the phenotypic consequences of tissue specific gene expression variation inferred from GWAS summary statistics. Nature Communications. 9: 1825. PMID 29739930 DOI: 10.1038/S41467-018-03621-1  0.01
2018 Baek S, Cho Y, Lee J, Choi B, Choi Y, Park J, Kim H, Sul J, Kim E, Park J, Jo D. Intracellular and Mitochondrial Reactive Oxygen Species Measurement in Primary Cultured Neurons Bio-Protocol. 8. DOI: 10.21769/bioprotoc.2466  0.01
2017 Saha A, Kim Y, Gewirtz ADH, Jo B, Gao C, McDowell IC, Engelhardt BE, Battle A. Co-expression networks reveal the tissue-specific regulation of transcription and splicing. Genome Research. PMID 29021288 DOI: 10.1101/Gr.216721.116  0.01
2017 Duong D, Gai L, Snir S, Kang EY, Han B, Sul JH, Eskin E. Applying meta-analysis to genotype-tissue expression data from multiple tissues to identify eQTLs and increase the number of eGenes. Bioinformatics (Oxford, England). 33: i67-i74. PMID 28881962 DOI: 10.1093/Bioinformatics/Btx227  0.76
2017 Huang AY, Yu D, Davis LK, Sul JH, Tsetsos F, Ramensky V, Zelaya I, Ramos EM, Osiecki L, Chen JA, McGrath LM, Illmann C, Sandor P, Barr CL, Grados M, et al. Rare Copy Number Variants in NRXN1 and CNTN6 Increase Risk for Tourette Syndrome. Neuron. 94: 1101-1111.e7. PMID 28641109 DOI: 10.1016/J.Neuron.2017.06.010  0.12
2017 Sohail M, Vakhrusheva OA, Sul JH, Pulit SL, Francioli LC, van den Berg LH, Veldink JH, de Bakker PIW, Bazykin GA, Kondrashov AS, Sunyaev SR. Negative selection in humans and fruit flies involves synergistic epistasis. Science (New York, N.Y.). 356: 539-542. PMID 28473589 DOI: 10.1126/Science.Aah5238  0.04
2017 Willsey AJ, Fernandez TV, Yu D, King RA, Dietrich A, Xing J, Sanders SJ, Mandell JD, Huang AY, Richer P, Smith L, Dong S, Samocha KE, et al. De Novo Coding Variants Are Strongly Associated with Tourette Disorder. Neuron. 94: 486-499.e9. PMID 28472652 DOI: 10.1016/J.Neuron.2017.04.024  0.01
2017 Duong D, Gai L, Snir S, Kang EY, Han B, Sul JH, Eskin E. Applying meta-analysis to Genotype-Tissue Expression data from multiple tissues to find eQTLs and eGenes F1000research. 6. DOI: 10.7490/F1000Research.1114779.1  0.76
2016 Hormozdiari F, van de Bunt M, Segrè AV, Li X, Joo JW, Bilow M, Sul JH, Sankararaman S, Pasaniuc B, Eskin E. Colocalization of GWAS and eQTL Signals Detects Target Genes. American Journal of Human Genetics. PMID 27866706 DOI: 10.1016/J.Ajhg.2016.10.003  0.76
2016 Sul JH, Cade BE, Cho MH, Qiao D, Silverman EK, Redline S, Sunyaev S. Increasing Generality and Power of Rare-Variant Tests by Utilizing Extended Pedigrees. American Journal of Human Genetics. PMID 27666371 DOI: 10.1016/J.Ajhg.2016.08.015  0.01
2016 Bae JS, Koh I, Cheong HS, Seo JM, Kim DY, Oh JT, Kim HY, Jung K, Sul JH, Park WY, Kim JH, Shin HD. A genome-wide association analysis of chromosomal aberrations and Hirschsprung disease. Translational Research : the Journal of Laboratory and Clinical Medicine. PMID 27370899 DOI: 10.1016/J.Trsl.2016.06.001  0.01
2016 Duong D, Zou J, Hormozdiari F, Sul JH, Ernst J, Han B, Eskin E. Using genomic annotations increases statistical power to detect eGenes. Bioinformatics (Oxford, England). 32: i156-i163. PMID 27307612 DOI: 10.1093/Bioinformatics/Btw272  0.76
2016 Sul JH, Bilow M, Yang WY, Kostem E, Furlotte N, He D, Eskin E. Accounting for Population Structure in Gene-by-Environment Interactions in Genome-Wide Association Studies Using Mixed Models. Plos Genetics. 12: e1005849. PMID 26943367 DOI: 10.1371/Journal.Pgen.1005849  0.76
2016 Han B, Duong D, Sul JH, de Bakker PI, Eskin E, Raychaudhuri S. A general framework for meta-analyzing dependent studies with overlapping subjects in association mapping. Human Molecular Genetics. PMID 26908615 DOI: 10.1093/Hmg/Ddw049  0.76
2015 Sul JH, Raj T, de Jong S, de Bakker PI, Raychaudhuri S, Ophoff RA, Stranger BE, Eskin E, Han B. Accurate and fast multiple-testing correction in eQTL studies. American Journal of Human Genetics. 96: 857-68. PMID 26027500 DOI: 10.1016/J.Ajhg.2015.04.012  0.76
2015 Peyrot WJ, Lee SH, Milaneschi Y, Abdellaoui A, Byrne EM, Esko T, de Geus EJ, Hemani G, Hottenga JJ, Kloiber S, Levinson DF, Lucae S, Martin NG, Medland SE, et al. The association between lower educational attainment and depression owing to shared genetic effects? Results in ~25,000 subjects. Molecular Psychiatry. 20: 735-43. PMID 25917368 DOI: 10.1038/Mp.2015.50  0.01
2015 Wang Z, Sul JH, Snir S, Lozano JA, Eskin E. Gene-Gene Interactions Detection Using a Two-stage Model. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 22: 563-76. PMID 25871811 DOI: 10.1089/Cmb.2014.0163  0.76
2015 Luykx JJ, Bakker SC, Visser WF, Verhoeven-Duif N, Buizer-Voskamp JE, den Heijer JM, Boks MP, Sul JH, Eskin E, Ori AP, Cantor RM, Vorstman J, Strengman E, DeYoung J, Kappen TH, et al. Genome-wide association study of NMDA receptor coagonists in human cerebrospinal fluid and plasma. Molecular Psychiatry. PMID 25666758 DOI: 10.1038/Mp.2014.190  0.76
2014 Kim JH, Cheong HS, Sul JH, Seo JM, Kim DY, Oh JT, Park KW, Kim HY, Jung SM, Jung K, Cho MJ, Bae JS, Shin HD. A genome-wide association study identifies potential susceptibility loci for Hirschsprung disease. Plos One. 9: e110292. PMID 25310821 DOI: 10.1371/Journal.Pone.0110292  0.01
2014 de Zeeuw EL, van Beijsterveldt CEM, Glasner TJ, Bartels M, Ehli EA, Davies GE, Hudziak JJ, Rietveld CA, Groen-Blokhuis MM, Hottenga JJ, de Geus EJC, Boomsma DI, Abdellaoui A, Agrawal A, Albrecht E, et al. Polygenic scores associated with educational attainment in adults predict educational achievement and ADHD symptoms in children American Journal of Medical Genetics, Part B: Neuropsychiatric Genetics. 165: 510-520. PMID 25044548 DOI: 10.1002/Ajmg.B.32254  0.01
2014 Plongthongkum N, van Eijk KR, de Jong S, Wang T, Sul JH, Boks MP, Kahn RS, Fung HL, Ophoff RA, Zhang K. Characterization of genome-methylome interactions in 22 nuclear pedigrees. Plos One. 9: e99313. PMID 25019935 DOI: 10.1371/Journal.Pone.0099313  0.76
2014 Joo JW, Sul JH, Han B, Ye C, Eskin E. Effectively identifying regulatory hotspots while capturing expression heterogeneity in gene expression studies. Genome Biology. 15: r61. PMID 24708878 DOI: 10.1186/Gb-2014-15-4-R61  0.76
2014 Luykx JJ, Bakker SC, Lentjes E, Neeleman M, Strengman E, Mentink L, DeYoung J, de Jong S, Sul JH, Eskin E, van Eijk K, van Setten J, Buizer-Voskamp JE, Cantor RM, Lu A, et al. Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. Molecular Psychiatry. 19: 228-34. PMID 23319000 DOI: 10.1038/Mp.2012.183  0.76
2013 Sul JH, Han B, Ye C, Choi T, Eskin E. Effectively identifying eQTLs from multiple tissues by combining mixed model and meta-analytic approaches. Plos Genetics. 9: e1003491. PMID 23785294 DOI: 10.1371/Journal.Pgen.1003491  0.76
2013 Rietveld CA, Medland SE, Derringer J, Yang J, Esko T, Martin NW, Westra HJ, Shakhbazov K, Abdellaoui A, Agrawal A, Albrecht E, Alizadeh BZ, Amin N, Barnard J, Baumeister SE, ... ... Sul JH, et al. GWAS of 126,559 individuals identifies genetic variants associated with educational attainment. Science (New York, N.Y.). 340: 1467-71. PMID 23722424 DOI: 10.1126/Science.1235488  0.01
2013 Navon O, Sul JH, Han B, Conde L, Bracci PM, Riby J, Skibola CF, Eskin E, Halperin E. Rare variant association testing under low-coverage sequencing. Genetics. 194: 769-79. PMID 23636738 DOI: 10.1534/Genetics.113.150169  0.76
2013 Sul JH, Eskin E. Mixed models can correct for population structure for genomic regions under selection. Nature Reviews. Genetics. 14: 300. PMID 23438871 DOI: 10.1038/Nrg2813-C1  0.76
2013 Kim HK, Lim JM, Sul JH, Oh YP. School Zone Safety Improvement Using Smart Bollard Journal of the Korean Society of Civil Engineers. 33: 251-259. DOI: 10.12652/Ksce.2013.33.1.251  0.01
2012 Miller MB, Basu S, Cunningham J, Eskin E, Malone SM, Oetting WS, Schork N, Sul JH, Iacono WG, McGue M. The Minnesota Center for Twin and Family Research genome-wide association study. Twin Research and Human Genetics : the Official Journal of the International Society For Twin Studies. 15: 767-74. PMID 23363460 DOI: 10.1017/Thg.2012.62  0.76
2012 Yoo BW, Kim JO, Kim YJ, Choi JY, Park HK, Park YH, Sul JH. Impact of pressure load caused by right ventricular outflow tract obstruction on right ventricular volume overload in patients with repaired tetralogy of Fallot. The Journal of Thoracic and Cardiovascular Surgery. 143: 1299-304. PMID 22244553 DOI: 10.1016/j.jtcvs.2011.12.033  0.01
2011 Sul JH, Han B, Eskin E. Increasing power of groupwise association test with likelihood ratio test. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 18: 1611-24. PMID 21919745 DOI: 10.1089/Cmb.2011.0161  0.76
2011 Sul JH, Jo S, Lee D, Jung MW. Role of rodent secondary motor cortex in value-based action selection. Nature Neuroscience. 14: 1202-8. PMID 21841777 DOI: 10.1038/nn.2881  0.01
2011 Eun LY, Song H, Choi E, Lee TG, Moon DW, Hwang D, Byun KH, Sul JH, Hwang KC. Implanted bone marrow-derived mesenchymal stem cells fail to metabolically stabilize or recover electromechanical function in infarcted hearts. Tissue & Cell. 43: 238-45. PMID 21700305 DOI: 10.1016/j.tice.2011.04.002  0.01
2011 Chavalitdhamrong D, Chen GC, Roth BE, Goltzer O, Sul J, Jutabha R. Esophageal capsule endoscopy for evaluation of patients with chronic gastroesophageal reflux symptoms: findings and its image quality. Diseases of the Esophagus : Official Journal of the International Society For Diseases of the Esophagus / I.S.D.E. 24: 295-8. PMID 21668569 DOI: 10.1111/j.1442-2050.2010.01136.x  0.01
2011 Kim YM, Yoo BW, Choi JY, Sul JH, Park YH. Traumatic ventricular septal defect in a 4-year-old boy after blunt chest injury. Korean Journal of Pediatrics. 54: 86-9. PMID 21503202 DOI: 10.3345/kjp.2011.54.2.86  0.04
2011 Sul JH, Han B, He D, Eskin E. An optimal weighted aggregated association test for identification of rare variants involved in common diseases. Genetics. 188: 181-8. PMID 21368279 DOI: 10.1534/Genetics.110.125070  0.76
2010 Park YA, Kim NK, Park SJ, Yun BS, Choi JY, Sul JH. Clinical outcome of transcatheter closure of patent ductus arteriosus in small children weighing 10 kg or less. Korean Journal of Pediatrics. 53: 1012-7. PMID 21253316 DOI: 10.3345/kjp.2010.53.12.1012  0.01
2010 Sul JH, Kim H, Huh N, Lee D, Jung MW. Distinct roles of rodent orbitofrontal and medial prefrontal cortex in decision making. Neuron. 66: 449-60. PMID 20471357 DOI: 10.1016/j.neuron.2010.03.033  0.01
2010 Park SJ, Kim NK, Kim JO, Yoo BW, Choi JY, Sul JH. Morphologic Characteristics and Relating Factors to the Need of Technical Modification in Transcatheter Closure of Large Atrial Septal Defect (>/=25 mm). Korean Circulation Journal. 40: 191-6. PMID 20421960 DOI: 10.4070/kcj.2010.40.4.191  0.04
2010 Kang HM, Sul JH, Service SK, Zaitlen NA, Kong SY, Freimer NB, Sabatti C, Eskin E. Variance component model to account for sample structure in genome-wide association studies. Nature Genetics. 42: 348-54. PMID 20208533 DOI: 10.1038/Ng.548  0.76
2010 Stein JL, Hua X, Morra JH, Lee S, Hibar DP, Ho AJ, Leow AD, Toga AW, Sul JH, Kang HM, Eskin E, Saykin AJ, Shen L, Foroud T, Pankratz N, et al. Genome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer's disease. Neuroimage. 51: 542-54. PMID 20197096 DOI: 10.1016/J.Neuroimage.2010.02.068  0.76
2009 Kim H, Sul JH, Huh N, Lee D, Jung MW. Role of striatum in updating values of chosen actions. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 29: 14701-12. PMID 19940165 DOI: 10.1523/JNEUROSCI.2728-09.2009  0.01
2009 Huh N, Jo S, Kim H, Sul JH, Jung MW. Model-based reinforcement learning under concurrent schedules of reinforcement in rodents. Learning & Memory (Cold Spring Harbor, N.Y.). 16: 315-23. PMID 19403794 DOI: 10.1101/lm.1295509  0.01
2008 Choi JY, Kwon HS, Yoo BW, Shin JI, Sul JH, Park HK, Park YH. Right ventricular restrictive physiology in repaired tetralogy of Fallot is associated with smaller respiratory variability. International Journal of Cardiology. 125: 28-35. PMID 17433839 DOI: 10.1016/j.ijcard.2007.02.020  0.08
2007 Kwon HS, Shin JI, Choi JY, Sul JH, Jang YS. Polytetrafluoroethylene-covered stent deployment in the setting of Kawasaki disease. Catheterization and Cardiovascular Interventions : Official Journal of the Society For Cardiac Angiography & Interventions. 69: 1075-6; author reply. PMID 17526008 DOI: 10.1002/ccd.21002  0.01
2007 Shin JI, Kim JH, Lee JS, Kim DS, Choi JY, Sul JH. Cardiac manifestations of Henoch-Schoenlein purpura: IgA mediated vasculitis or Rheumatic fever? European Journal of Pediatrics. 166: 627. PMID 17047991 DOI: 10.1007/s00431-006-0273-2  0.01
2007 Shin JI, Choi JY, Sul JH, Kim DS, Park YH. Rapidly progressive dilatation of coronary artery aneurysm associated with Kawasaki disease. European Journal of Pediatrics. 166: 87; author reply 89-. PMID 16862436 DOI: 10.1007/s00431-006-0199-8  0.01
2006 Lu H, Cai L, Mu LN, Lu QY, Zhao J, Cui Y, Sul JH, Zhou XF, Ding BG, Elashoff RM, Marshall J, Yu SZ, Jiang QW, Zhang ZF. Dietary mineral and trace element intake and squamous cell carcinoma of the esophagus in a Chinese population. Nutrition and Cancer. 55: 63-70. PMID 16965242 DOI: 10.1207/S15327914Nc5501_8  0.01
2006 Shin JI, Kim JH, Lee JS, Kim DS, Choi JY, Sul JH. Kawasaki disease and hyponatremia. Pediatric Nephrology (Berlin, Germany). 21: 1490-1; author reply. PMID 16896998 DOI: 10.1007/s00467-006-0242-z  0.01
2006 Hwang IS, Huang CC, Sul JH, Huang CT, Wang CH, Young MS. The effects of weight load and joint immobilization on reorganization of postural tremor. Electromyography and Clinical Neurophysiology. 46: 67-77. PMID 16795996  0.01
2004 Ginsparg P, Houle P, Joachims T, Sul JH. Mapping subsets of scholarly information. Proceedings of the National Academy of Sciences of the United States of America. 101: 5236-40. PMID 14766973 DOI: 10.1073/Pnas.0308253100  0.01
2001 Choi BW, Park YH, Choi JY, Choi BI, Kim MJ, Ryu SJ, Lee JK, Sul JH, Lee SK, Cho BK, Choe KO. Using electron beam CT to evaluate conotruncal anomalies in pediatric and adult patients. Ajr. American Journal of Roentgenology. 177: 1045-9. PMID 11641166 DOI: 10.2214/ajr.177.5.1771045  0.01
2000 Hong YK, Park YW, Ryu SJ, Won JW, Choi JY, Sul JH, Lee SK, Cho BK, Choe KO. Efficacy of MRI in complicated congenital heart disease with visceral heterotaxy syndrome. Journal of Computer Assisted Tomography. 24: 671-82. PMID 11045684  0.01
2000 Hahm JK, Park YW, Lee JK, Choi JY, Sul JH, Lee SK, Cho BK, Choe KO. Magnetic resonance imaging of unroofed coronary sinus: three cases. Pediatric Cardiology. 21: 382-7. PMID 10865020 DOI: 10.1007/s002460010087  0.01
1992 Hong CY, Yun YS, Choi JY, Sul JH, Lee KS, Cha SH, Hong YM, Lee HJ, Hong YJ, Sohn KC. Takayasu arteritis in Korean children: clinical report of seventy cases. Heart and Vessels. Supplement. 7: 91-6. PMID 1360979  0.01
1991 Van Praagh S, Vangi V, Sul JH, Metras D, Parness I, Castaneda AR, Van Praagh R. Tricuspid atresia or severe stenosis with partial common atrioventricular canal: anatomic data, clinical profile and surgical considerations. Journal of the American College of Cardiology. 17: 932-43. PMID 1999631  0.01
1981 Lee KY, Sul JH, Lee YN, Kim CH, Kim JD. A measurement of rubella antibodies among Korean children by enzyme-linked immunosorbent assay. Yonsei Medical Journal. 22: 41-8. PMID 6753358  0.04
1979 Sul JH, Kim PK, Yun DJ. Serum C3 levels in acute poststreptococcal glomerulonephritis. Yonsei Medical Journal. 20: 149-54. PMID 552189  0.01
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