| Year |
Citation |
Score |
| 2019 |
Ramos I, Smith G, Ruf-Zamojski F, Martinez-Romero C, Fribourg M, Carbajal EA, Hartmann BM, Nair VD, Marjanovic N, Monteagudo PL, DeJesus VA, Mutetwa T, Zamojski M, Tan GS, Jayaprakash C, ... Zaslavsky E, et al. Innate immune response to influenza virus at single-cell resolution in human epithelial cells revealed paracrine induction of interferon lambda 1. Journal of Virology. PMID 31375585 DOI: 10.1128/Jvi.00559-19 |
0.337 |
|
| 2019 |
Mao W, Zaslavsky E, Hartmann BM, Sealfon SC, Chikina M. Pathway-level information extractor (PLIER) for gene expression data. Nature Methods. 16: 607-610. PMID 31249421 DOI: 10.1038/S41592-019-0456-1 |
0.322 |
|
| 2018 |
Tome-Garcia J, Erfani P, Nudelman G, Tsankov AM, Katsyv I, Tejero R, Bin Zhang, Walsh M, Friedel RH, Zaslavsky E, Tsankova NM. Analysis of chromatin accessibility uncovers TEAD1 as a regulator of migration in human glioblastoma. Nature Communications. 9: 4020. PMID 30275445 DOI: 10.1038/S41467-018-06258-2 |
0.314 |
|
| 2018 |
Nudelman G, Frasca A, Kent B, Sadler KC, Sealfon SC, Walsh MJ, Zaslavsky E. High resolution annotation of zebrafish transcriptome using long-read sequencing. Genome Research. PMID 30061115 DOI: 10.1101/Gr.223586.117 |
0.37 |
|
| 2018 |
Ruf-Zamojski F, Fribourg M, Ge Y, Nair V, Pincas H, Zaslavsky E, Nudelman G, Tuminello SJ, Watanabe H, Turgeon JL, Sealfon SC. Regulatory Architecture of the LβT2 Gonadotrope Cell Underlying the Response to Gonadotropin-Releasing Hormone. Frontiers in Endocrinology. 9: 34. PMID 29487567 DOI: 10.3389/Fendo.2018.00034 |
0.322 |
|
| 2017 |
Hartmann BM, Albrecht RA, Zaslavsky E, Nudelman G, Pincas H, Marjanovic N, Schotsaert M, Martínez-Romero C, Fenutria R, Ingram JP, Ramos I, Fernandez-Sesma A, Balachandran S, García-Sastre A, Sealfon SC. Pandemic H1N1 influenza A viruses suppress immunogenic RIPK3-driven dendritic cell death. Nature Communications. 8: 1931. PMID 29203926 DOI: 10.1038/S41467-017-02035-9 |
0.319 |
|
| 2017 |
Tsankova N, Erfani P, Tome-Garcia J, Nudelman G, Tsankov A, Walsh M, Zaslavsky E. GENE-11. CHROMATIN ACCESSIBILITY DEFINES TRANSCRIPTIONAL DRIVERS OF MIGRATION IN HUMAN GLIOBLASTOMA Neuro-Oncology. 19: vi94-vi95. DOI: 10.1093/Neuonc/Nox168.386 |
0.31 |
|
| 2015 |
Gorenshteyn D, Zaslavsky E, Fribourg M, Park CY, Wong AK, Tadych A, Hartmann BM, Albrecht RA, García-Sastre A, Kleinstein SH, Troyanskaya OG, Sealfon SC. Interactive Big Data Resource to Elucidate Human Immune Pathways and Diseases. Immunity. 43: 605-14. PMID 26362267 DOI: 10.1016/J.Immuni.2015.08.014 |
0.336 |
|
| 2015 |
Hartmann BM, Thakar J, Albrecht RA, Avey S, Zaslavsky E, Marjanovic N, Chikina M, Fribourg M, Hayot F, Schmolke M, Meng H, Wetmur J, García-Sastre A, Kleinstein SH, Sealfon SC. Human Dendritic Cell Response Signatures Distinguish 1918, Pandemic, and Seasonal H1N1 Influenza Viruses. Journal of Virology. 89: 10190-205. PMID 26223639 DOI: 10.1128/Jvi.01523-15 |
0.339 |
|
| 2015 |
Greene CS, Krishnan A, Wong AK, Ricciotti E, Zelaya RA, Himmelstein DS, Zhang R, Hartmann BM, Zaslavsky E, Sealfon SC, Chasman DI, FitzGerald GA, Dolinski K, Grosser T, Troyanskaya OG. Understanding multicellular function and disease with human tissue-specific networks. Nature Genetics. 47: 569-76. PMID 25915600 DOI: 10.1038/Ng.3259 |
0.306 |
|
| 2015 |
Chikina M, Zaslavsky E, Sealfon SC. CellCODE: a robust latent variable approach to differential expression analysis for heterogeneous cell populations. Bioinformatics (Oxford, England). 31: 1584-91. PMID 25583121 DOI: 10.1093/Bioinformatics/Btv015 |
0.303 |
|
| 2013 |
Zaslavsky E, Nudelman G, Marquez S, Hershberg U, Hartmann BM, Thakar J, Sealfon SC, Kleinstein SH. Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection. Bmc Bioinformatics. 14: S1. PMID 23734902 DOI: 10.1186/1471-2105-14-S6-S1 |
0.607 |
|
| 2012 |
Zaslavsky E, Hayot F, Sealfon SC. Computational approaches to understanding dendritic cell responses to influenza virus infection. Immunologic Research. 54: 160-8. PMID 22544465 DOI: 10.1007/S12026-012-8322-6 |
0.345 |
|
| 2011 |
Kingsford C, Zaslavsky E, Singh M. A cost-aggregating integer linear program for motif finding. Journal of Discrete Algorithms (Amsterdam, Netherlands). 9: 326-334. PMID 22081765 DOI: 10.1016/J.Jda.2011.04.001 |
0.669 |
|
| 2010 |
Altschul SF, Wootton JC, Zaslavsky E, Yu YK. The construction and use of log-odds substitution scores for multiple sequence alignment. Plos Computational Biology. 6: e1000852. PMID 20657661 DOI: 10.1371/Journal.Pcbi.1000852 |
0.351 |
|
| 2010 |
Zaslavsky E, Hershberg U, Seto J, Pham AM, Marquez S, Duke JL, Wetmur JG, Tenoever BR, Sealfon SC, Kleinstein SH. Antiviral response dictated by choreographed cascade of transcription factors. Journal of Immunology (Baltimore, Md. : 1950). 184: 2908-17. PMID 20164420 DOI: 10.4049/Jimmunol.0903453 |
0.635 |
|
| 2009 |
Yanover C, Singh M, Zaslavsky E. M are better than one: an ensemble-based motif finder and its application to regulatory element prediction. Bioinformatics (Oxford, England). 25: 868-74. PMID 19223448 DOI: 10.1093/Bioinformatics/Btp090 |
0.566 |
|
| 2006 |
Zaslavsky E, Singh M. A combinatorial optimization approach for diverse motif finding applications. Algorithms For Molecular Biology : Amb. 1: 13. PMID 16916460 DOI: 10.1186/1748-7188-1-13 |
0.592 |
|
| 2006 |
Kingsford C, Zaslavsky E, Singh M. A compact mathematical programming formulation for DNA motif finding Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 4009: 233-245. DOI: 10.1007/11780441_22 |
0.668 |
|
| 2004 |
Osada R, Zaslavsky E, Singh M. Comparative analysis of methods for representing and searching for transcription factor binding sites. Bioinformatics (Oxford, England). 20: 3516-25. PMID 15297295 DOI: 10.1093/Bioinformatics/Bth438 |
0.648 |
|
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