David B. Knoester, Ph.D. - Related publications

Affiliations: 
2011 Computer Science Michigan State University, East Lansing, MI 
Area:
Computer Science
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50 most relevant papers in past 60 days:
Year Citation  Score
2020 Cooper VS, Honsa E, Rowe H, Deitrick C, Iverson AR, Whittall JJ, Neville SL, McDevitt CA, Kietzman C, Rosch JW. Experimental Evolution To Identify Selective Pressures during Pneumococcal Colonization. Msystems. 5. PMID 32398278 DOI: 10.1128/mSystems.00352-20   
2020 Lin J, Manhart M, Amir A. Evolution of Microbial Growth Traits Under Serial Dilution. Genetics. PMID 32366512 DOI: 10.1534/genetics.120.303149   
2020 Cotto O, Chevin LM. Fluctuations in lifetime selection in an autocorrelated environment. Theoretical Population Biology. PMID 32275919 DOI: 10.1016/j.tpb.2020.03.002   
2020 Tikhonov M, Kachru S, Fisher DS. A model for the interplay between plastic tradeoffs and evolution in changing environments. Proceedings of the National Academy of Sciences of the United States of America. PMID 32245811 DOI: 10.1073/pnas.1915537117   
2020 Yi X, Kazlauskas R, Travisano M. Evolutionary innovation using EDGE, a system for localized elevated mutagenesis. Plos One. 15: e0232330. PMID 32353078 DOI: 10.1371/journal.pone.0232330   
2020 Pierotti R. Historical links between Ethnobiology and Evolution: Conflicts and possible resolutions. Studies in History and Philosophy of Biological and Biomedical Sciences. 101277. PMID 32238300 DOI: 10.1016/j.shpsc.2020.101277   
2020 van Alphen JJM, Fernhout BJ. Natural selection, selective breeding, and the evolution of resistance of honeybees ( against . Zoological Letters. 6: 6. PMID 32467772 DOI: 10.1186/s40851-020-00158-4   
2020 Morales-Arce AY, Harris RB, Stone AC, Jensen JD. Evaluating the contributions of purifying selection and progeny-skew in dictating within-host Mycobacterium tuberculosis evolution. Evolution; International Journal of Organic Evolution. PMID 32233086 DOI: 10.1111/evo.13954   
2020 Parvinen K, Ohtsuki H, Wakano JY. Evolution of dispersal in a spatially heterogeneous population with finite patch sizes. Proceedings of the National Academy of Sciences of the United States of America. 117: 7290-7295. PMID 32188778 DOI: 10.1073/pnas.1915881117   
2020 Endo C, Watanabe K. Morphological variation associated with trophic niche expansion within a lake population of a benthic fish. Plos One. 15: e0232114. PMID 32324829 DOI: 10.1371/journal.pone.0232114   
2020 Lynch M. The evolutionary scaling of cellular traits imposed by the drift barrier. Proceedings of the National Academy of Sciences of the United States of America. PMID 32345718 DOI: 10.1073/pnas.2000446117   
2020 Bartlett LJ, Visher E, Haro Y, Roberts KE, Boots M. The target of selection matters: An established resistance - development-time negative genetic trade-off is not found when selecting on development time. Journal of Evolutionary Biology. PMID 32390292 DOI: 10.1111/jeb.13639   
2020 Start D, Weis AE, Gilbert B. Ecological and Evolutionary Stochasticity Shape Natural Selection. The American Naturalist. 195: 705-716. PMID 32216665 DOI: 10.1086/707364   
2020 Bosshard L, Peischl S, Ackermann M, Excoffier L. Dissection of the mutation accumulation process during bacterial range expansions. Bmc Genomics. 21: 253. PMID 32293258 DOI: 10.1186/s12864-020-6676-z   
2020 Semenec L, Vergara IA, Laloo AE, Petrovski S, Bond PL, Franks AE. Adaptive Evolution of Geobacter sulfurreducens in Coculture with Pseudomonas aeruginosa. Mbio. 11. PMID 32265334 DOI: 10.1128/mBio.02875-19   
2020 Liu L, Wang Y, Zhang D, Chen Z, Chen X, Su Z, He X. The origin of additive genetic variance driven by positive selection. Molecular Biology and Evolution. PMID 32243529 DOI: 10.1093/molbev/msaa085   
2020 Wang Y, Cooper TF. Environment dependent costs and benefits of recombination in independently evolved populations of Escherichia coli. Evolution; International Journal of Organic Evolution. PMID 32281651 DOI: 10.1111/evo.13974   
2020 Xue CX, Zhang H, Lin HY, Sun Y, Luo D, Huang Y, Zhang XH, Luo H. Ancestral Niche Separation and Evolutionary Rate Differentiation Between Sister Marine Flavobacteria Lineages. Environmental Microbiology. PMID 32390223 DOI: 10.1111/1462-2920.15065   
2020 Lehmann L, Rousset F. When Do Individuals Maximize Their Inclusive Fitness? The American Naturalist. 195: 717-732. PMID 32216664 DOI: 10.1086/707561   
2020 Côté K, Simons AM. Genotype-environment interaction and the maintenance of genetic variation: an empirical study of (Campanulaceae). Royal Society Open Science. 7: 191720. PMID 32269800 DOI: 10.1098/rsos.191720   
2020 Gomes-Silva G, Cyubahiro E, Wronski T, Riesch R, Apio A, Plath M. Water pollution affects fish community structure and alters evolutionary trajectories of invasive guppies (Poecilia reticulata). The Science of the Total Environment. 730: 138912. PMID 32402962 DOI: 10.1016/j.scitotenv.2020.138912   
2020 Schou MF, Kristensen TN, Hoffmann AA. Patterns of environmental variance across environments and traits in domestic cattle. Evolutionary Applications. 13: 1090-1102. PMID 32431754 DOI: 10.1111/eva.12924   
2020 Wodarz D, Stipp S, Hirshleifer D, Komarova NL. Evolutionary dynamics of culturally transmitted, fertility-reducing traits. Proceedings. Biological Sciences. 287: 20192468. PMID 32290801 DOI: 10.1098/rspb.2019.2468   
2020 Barghi N, Schlötterer C. Distinct patterns of selective sweep and polygenic adaptation in evolve and re-sequence studies. Genome Biology and Evolution. PMID 32282913 DOI: 10.1093/gbe/evaa073   
2020 Echeverry AM, Londoño-Cruz E, Benítez HA. Quantifying the Geometric Shell Shape between Populations of True Limpets (Mollusca: Lottidae) in Colombia. Animals : An Open Access Journal From Mdpi. 10. PMID 32294895 DOI: 10.3390/ani10040675   
2020 Wang Y, Rattray JB, Thomas SA, Gurney J, Brown SP. In silico bacteria evolve robust cooperaion via complex quorum-sensing strategies. Scientific Reports. 10: 8628. PMID 32451396 DOI: 10.1038/s41598-020-65076-z   
2020 Dehasque M, Ávila-Arcos MC, Díez-Del-Molino D, Fumagalli M, Guschanski K, Lorenzen ED, Malaspinas AS, Marques-Bonet T, Martin MD, Murray GGR, Papadopulos AST, Therkildsen NO, Wegmann D, Dalén L, Foote AD. Inference of natural selection from ancient DNA. Evolution Letters. 4: 94-108. PMID 32313686 DOI: 10.1002/evl3.165   
2020 Aulsebrook LC, Bertram MG, Martin JM, Aulsebrook AE, Brodin T, Evans JP, Hall MD, O'Bryan MK, Pask AJ, Tyler CR, Wong BBM. Reproduction in a polluted world: implications for wildlife. Reproduction (Cambridge, England). PMID 32442963 DOI: 10.1530/REP-20-0154   
2020 Jacobs A, Carruthers M, Yurchenko A, Gordeeva NV, Alekseyev SS, Hooker O, Leong JS, Minkley DR, Rondeau EB, Koop BF, Adams CE, Elmer KR. Parallelism in eco-morphology and gene expression despite variable evolutionary and genomic backgrounds in a Holarctic fish. Plos Genetics. 16: e1008658. PMID 32302300 DOI: 10.1371/journal.pgen.1008658   
2020 Blount ZD, Maddamsetti R, Grant NA, Ahmed ST, Jagdish T, Baxter JA, Sommerfeld BA, Tillman A, Moore J, Slonczewski JL, Barrick JE, Lenski RE. Genomic and phenotypic evolution of in a novel citrate-only resource environment. Elife. 9. PMID 32469311 DOI: 10.7554/eLife.55414   
2020 Miles MC, Schuppe ER, Fuxjager MJ. Selection for Rhythm as a Trigger for Recursive Evolution in the Elaborate Display System of Woodpeckers. The American Naturalist. 195: 772-787. PMID 32364790 DOI: 10.1086/707748   
2020 Osmond MM, Coop G. Genetic Signatures of Evolutionary Rescue by a Selective Sweep. Genetics. PMID 32398227 DOI: 10.1534/genetics.120.303173   
2020 Perry GH. How human behavior can impact the evolution of genetically-mediated behavior in wild non-human species. Journal of Comparative Physiology. a, Neuroethology, Sensory, Neural, and Behavioral Physiology. PMID 32201915 DOI: 10.1007/s00359-020-01415-9   
2020 Gangloff EJ, Schwartz TS, Klabacka R, Huebschman N, Liu AY, Bronikowski AM. Mitochondria as central characters in a complex narrative: Linking genomics, energetics, and pace-of-life in natural populations of garter snakes. Experimental Gerontology. 110967. PMID 32387125 DOI: 10.1016/j.exger.2020.110967   
2020 Turner-Hissong SD, Mabry ME, Beissinger TM, Ross-Ibarra J, Pires JC. Evolutionary insights into plant breeding. Current Opinion in Plant Biology. 54: 93-100. PMID 32325397 DOI: 10.1016/j.pbi.2020.03.003   
2020 Stilwell P, O'Brien S, Hesse E, Lowe C, Gardner A, Buckling A. Resource heterogeneity and the evolution of public goods cooperation. Evolution Letters. 4: 155-163. PMID 32313690 DOI: 10.1002/evl3.158   
2020 Reia SM, Campos PRA. Analysis of statistical correlations between properties of adaptive walks in fitness landscapes. Royal Society Open Science. 7: 192118. PMID 32218986 DOI: 10.1098/rsos.192118   
2020 Rousselle M, Simion P, Tilak MK, Figuet E, Nabholz B, Galtier N. Is adaptation limited by mutation? A timescale-dependent effect of genetic diversity on the adaptive substitution rate in animals. Plos Genetics. 16: e1008668. PMID 32251427 DOI: 10.1371/journal.pgen.1008668   
2020 Barreiro LB, Quintana-Murci L. Evolutionary and population (epi)genetics of immunity to infection. Human Genetics. PMID 32285198 DOI: 10.1007/s00439-020-02167-x   
2020 Gonçalves AP, Glass NL. Fungal social barriers: to fuse, or not to fuse, that is the question. Communicative & Integrative Biology. 13: 39-42. PMID 32313605 DOI: 10.1080/19420889.2020.1740554   
2020 Rey C, Darnaude A, Ferraton F, Guinand B, Bonhomme F, Bierne N, Gagnaire PA. Within-Generation Polygenic Selection Shapes Fitness-Related Traits across Environments in Juvenile Sea Bream. Genes. 11. PMID 32272597 DOI: 10.3390/genes11040398   
2020 Láruson ÁJ, Yeaman S, Lotterhos KE. The Importance of Genetic Redundancy in Evolution. Trends in Ecology & Evolution. PMID 32439075 DOI: 10.1016/j.tree.2020.04.009   
2020 Bilandžija H, Hollifield B, Steck M, Meng G, Ng M, Koch AD, Gračan R, Ćetković H, Porter ML, Renner KJ, Jeffery W. Phenotypic plasticity as a mechanism of cave colonization and adaptation. Elife. 9. PMID 32314737 DOI: 10.7554/eLife.51830   
2020 Zhong Z, Wong BG, Ravikumar A, Arzumanyan GA, Khalil AS, Liu CC. Automated continuous evolution of proteins . Acs Synthetic Biology. PMID 32374988 DOI: 10.1021/acssynbio.0c00135   
2020 Gauzere J, Teuf B, Davi H, Chevin LM, Caignard T, Leys B, Delzon S, Ronce O, Chuine I. Where is the optimum? Predicting the variation of selection along climatic gradients and the adaptive value of plasticity. A case study on tree phenology. Evolution Letters. 4: 109-123. PMID 32313687 DOI: 10.1002/evl3.160   
2020 Davies KTJ, Yohe LR, Almonte J, Sánchez MKR, Rengifo EM, Dumont ER, Sears KE, Dávalos LM, Rossiter SJ. Foraging shifts and visual preadaptation in ecologically diverse bats. Molecular Ecology. PMID 32293071 DOI: 10.1111/mec.15445   
2020 Sydykova DK, LaBar T, Adami C, Wilke CO. Moderate Amounts of Epistasis are Not Evolutionarily Stable in Small Populations. Journal of Molecular Evolution. PMID 32350572 DOI: 10.1007/s00239-020-09942-4   
2020 Williams MJ, Zapata L, Werner B, Barnes CP, Sottoriva A, Graham TA. Measuring the distribution of fitness effects in somatic evolution by combining clonal dynamics with dN/dS ratios. Elife. 9. PMID 32223898 DOI: 10.7554/eLife.48714   
2020 Dumont BL. Evolution: Is Recombination Rate Variation Adaptive? Current Biology : Cb. 30: R351-R353. PMID 32315634 DOI: 10.1016/j.cub.2020.02.061   
2020 Hämälä T, Gorton AJ, Moeller DA, Tiffin P. Pleiotropy facilitates local adaptation to distant optima in common ragweed (Ambrosia artemisiifolia). Plos Genetics. 16: e1008707. PMID 32210431 DOI: 10.1371/journal.pgen.1008707