Joshua D. Shrout, Ph.D. - Publications

Affiliations: 
2002 University of Iowa, Iowa City, IA 
Area:
Environmental Engineering

48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Parmar D, Rosado-Rosa JM, Shrout JD, Sweedler JV. Metabolic insights from mass spectrometry imaging of biofilms: A perspective from model microorganisms. Methods (San Diego, Calif.). 224: 21-34. PMID 38295894 DOI: 10.1016/j.ymeth.2024.01.014  0.322
2021 Sundaresan V, Do H, Shrout JD, Bohn PW. Electrochemical and spectroelectrochemical characterization of bacteria and bacterial systems. The Analyst. PMID 34874024 DOI: 10.1039/d1an01954f  0.302
2020 Dik DA, Kim C, Madukoma CS, Fisher JF, Shrout JD, Mobashery S. Fluorescence Assessment of the AmpR-Signaling Network of Pseudomonas aeruginosa to Exposure to β-Lactam Antibiotics. Acs Chemical Biology. PMID 31990176 DOI: 10.1021/Acschembio.9B00875  0.34
2019 Weaver AA, Hasan NA, Klaassen M, Karathia H, Colwell RR, Shrout JD. Prosthetic joint infections present diverse and unique microbial communities using combined whole-genome shotgun sequencing and culturing methods. Journal of Medical Microbiology. PMID 31460858 DOI: 10.1099/Jmm.0.001068  0.36
2019 Do H, Kwon SR, Fu K, Morales-Soto N, Shrout JD, Bohn PW. Electrochemical Surface Enhanced Raman Spectroscopy of Pyocyanin Secreted by Pseudomonas Aeruginosa Communities. Langmuir : the Acs Journal of Surfaces and Colloids. PMID 31042392 DOI: 10.1021/Acs.Langmuir.9B00184  0.392
2019 Dik DA, Madukoma CS, Tomoshige S, Kim C, Lastochkin E, Boggess WC, Fisher JF, Shrout JD, Mobashery S. Slt, MltD and MltG of Pseudomonas aeruginosa as Targets of Bulgecin A in Potentiation of -Lactam Antibiotics. Acs Chemical Biology. PMID 30620575 DOI: 10.1021/Acschembio.8B01025  0.35
2018 Tomoshige S, Dik DA, Akabane-Nakata M, Madukoma C, Fisher JF, Shrout JD, Mobashery S. Total Syntheses of Bulgecins A, B and C and Their Bactericidal Potentiation of the β-Lactam Antibiotics. Acs Infectious Diseases. PMID 29716193 DOI: 10.1021/Acsinfecdis.8B00105  0.31
2018 Dunham SJB, Ellis JF, Baig NF, Morales-Soto N, Cao T, Shrout JD, Bohn PW, Sweedler JV. Quantitative SIMS Imaging of Agar-Based Microbial Communities. Analytical Chemistry. PMID 29623707 DOI: 10.1021/Acs.Analchem.7B05180  0.31
2018 Morales-Soto N, Dunham SJB, Baig NF, Ellis JF, Madukoma CS, Bohn PW, Sweedler JV, Shrout JD. Spatially-dependent alkyl quinolone signaling responses to antibiotics inswarms. The Journal of Biological Chemistry. PMID 29588364 DOI: 10.1074/Jbc.Ra118.002605  0.336
2018 Mattingly AE, Weaver AA, Dimkovikj A, Shrout JD. Assessing Travel Conditions: Environmental and Host Influences On Bacterial Surface Motility. Journal of Bacteriology. PMID 29555698 DOI: 10.1128/Jb.00014-18  0.343
2018 Mattingly AE, Kamatkar N, Borlee BR, Shrout JD. Multiple environmental factors influence the importance of the phosphodiesterase DipA upon Pseudomonas aeruginosa swarming. Applied and Environmental Microbiology. PMID 29427430 DOI: 10.1128/Aem.02847-17  0.413
2018 Johnson CR, Shrout JD, Fein JB. Visualization and quantification of Cd sorption to bacteria using confocal laser scanning microscopy and Cd-specific fluorescent probes Chemical Geology. 483: 21-30. DOI: 10.1016/J.Chemgeo.2018.02.020  0.308
2017 Amiri A, Harvey C, Buchmann A, Christley S, Shrout JD, Aranson IS, Alber M. Reversals and collisions optimize protein exchange in bacterial swarms. Physical Review. E. 95: 032408. PMID 28415180 DOI: 10.1103/Physreve.95.032408  0.324
2016 Baig N, Polisetti S, Morales-Soto N, Dunham SJB, Sweedler JV, Shrout JD, Bohn PW. Label-free molecular imaging of bacterial communities of the opportunistic pathogen . Proceedings of Spie--the International Society For Optical Engineering. 9930. PMID 29670306 DOI: 10.1117/12.2236695  0.417
2016 Polisetti S, Baig NF, Morales-Soto N, Shrout JD, Bohn PW. Spatial Mapping of Pyocyanin in Pseudomonas Aeruginosa Bacterial Communities Using Surface Enhanced Raman Scattering. Applied Spectroscopy. PMID 27354400 DOI: 10.1177/0003702816654167  0.375
2015 Baig NF, Dunham SJ, Morales-Soto N, Shrout JD, Sweedler JV, Bohn PW. Multimodal chemical imaging of molecular messengers in emerging Pseudomonas aeruginosa bacterial communities. The Analyst. 140: 6544-52. PMID 26331158 DOI: 10.1039/C5An01149C  0.368
2015 Morales-Soto N, Anyan ME, Mattingly AE, Madukoma CS, Harvey CW, Alber M, Déziel E, Kearns DB, Shrout JD. Preparation, imaging, and quantification of bacterial surface motility assays. Journal of Visualized Experiments : Jove. PMID 25938934 DOI: 10.3791/52338  0.373
2015 Shrout JD. A fantastic voyage for sliding bacteria. Trends in Microbiology. 23: 244-6. PMID 25777934 DOI: 10.1016/J.Tim.2015.03.001  0.401
2014 Anyan ME, Amiri A, Harvey CW, Tierra G, Morales-Soto N, Driscoll CM, Alber MS, Shrout JD. Type IV pili interactions promote intercellular association and moderate swarming of Pseudomonas aeruginosa. Proceedings of the National Academy of Sciences of the United States of America. 111: 18013-8. PMID 25468980 DOI: 10.1073/Pnas.1414661111  0.327
2014 Lanni EJ, Masyuko RN, Driscoll CM, Dunham SJ, Shrout JD, Bohn PW, Sweedler JV. Correlated imaging with C60-SIMS and confocal Raman microscopy: Visualization of cell-scale molecular distributions in bacterial biofilms. Analytical Chemistry. 86: 10885-91. PMID 25268906 DOI: 10.1021/Ac5030914  0.344
2014 Masyuko RN, Lanni EJ, Driscoll CM, Shrout JD, Sweedler JV, Bohn PW. Spatial organization of Pseudomonas aeruginosa biofilms probed by combined matrix-assisted laser desorption ionization mass spectrometry and confocal Raman microscopy. The Analyst. 139: 5700-8. PMID 24883432 DOI: 10.1039/C4An00435C  0.406
2013 Dehner C, Morales-Soto N, Behera RK, Shrout J, Theil EC, Maurice PA, Dubois JL. Ferritin and ferrihydrite nanoparticles as iron sources for Pseudomonas aeruginosa. Journal of Biological Inorganic Chemistry : Jbic : a Publication of the Society of Biological Inorganic Chemistry. 18: 371-81. PMID 23417538 DOI: 10.1007/S00775-013-0981-9  0.317
2013 Shrout JD. The buzz in chronic wound treatment Science Translational Medicine. 5. DOI: 10.1126/Scitranslmed.3005908  0.386
2012 Du H, Xu Z, Anyan M, Kim O, Leevy WM, Shrout JD, Alber M. High density waves of the bacterium Pseudomonas aeruginosa in propagating swarms result in efficient colonization of surfaces. Biophysical Journal. 103: 601-9. PMID 22947877 DOI: 10.1016/J.Bpj.2012.06.035  0.362
2012 Shrout JD, Nerenberg R. Monitoring bacterial twitter: does quorum sensing determine the behavior of water and wastewater treatment biofilms? Environmental Science & Technology. 46: 1995-2005. PMID 22296043 DOI: 10.1021/Es203933H  0.385
2012 Staudt AK, Wolfe LG, Shrout JD. Variations in exopolysaccharide production by Rhizobium tropici. Archives of Microbiology. 194: 197-206. PMID 21858649 DOI: 10.1007/S00203-011-0742-5  0.334
2012 Shrout JD. Fungal pathogens: Getting to "c-u" Science Translational Medicine. 4. DOI: 10.1126/Scitranslmed.3005204  0.339
2012 Shrout JD. Appreciating staph support Science Translational Medicine. 4. DOI: 10.1126/Scitranslmed.3004562  0.358
2012 Shrout JD. Seeing an earful Science Translational Medicine. 4. DOI: 10.1126/Scitranslmed.3004425  0.373
2012 Shrout JD. Coming unglued: The potential to break apart biofilms Science Translational Medicine. 4. DOI: 10.1126/Scitranslmed.3004286  0.444
2012 Shrout JD. The calming effect of Escherichia coli Science Translational Medicine. 4. DOI: 10.1126/Scitranslmed.3004135  0.31
2011 Kamatkar NG, Sarna MJ, Shrout JD. Population dynamics during swarming of Pseudomonas aeruginosa. Communicative & Integrative Biology. 4: 689-91. PMID 22446528 DOI: 10.4161/Cib.17109  0.311
2011 Shrout JD, Tolker-Nielsen T, Givskov M, Parsek MR. The contribution of cell-cell signaling and motility to bacterial biofilm formation. Mrs Bulletin / Materials Research Society. 36: 367-373. PMID 22053126 DOI: 10.1557/Mrs.2011.67  0.432
2011 Morris JD, Hewitt JL, Wolfe LG, Kamatkar NG, Chapman SM, Diener JM, Courtney AJ, Leevy WM, Shrout JD. Imaging and analysis of Pseudomonas aeruginosa swarming and rhamnolipid production. Applied and Environmental Microbiology. 77: 8310-7. PMID 21984238 DOI: 10.1128/Aem.06644-11  0.384
2011 Kamatkar NG, Shrout JD. Surface hardness impairment of quorum sensing and swarming for Pseudomonas aeruginosa. Plos One. 6: e20888. PMID 21687741 DOI: 10.1371/Journal.Pone.0020888  0.364
2011 Conrad JC, Gibiansky ML, Jin F, Gordon VD, Motto DA, Mathewson MA, Stopka WG, Zelasko DC, Shrout JD, Wong GC. Flagella and pili-mediated near-surface single-cell motility mechanisms in P. aeruginosa. Biophysical Journal. 100: 1608-16. PMID 21463573 DOI: 10.1016/J.Bpj.2011.02.020  0.373
2010 Gibiansky ML, Conrad JC, Jin F, Gordon VD, Motto DA, Mathewson MA, Stopka WG, Zelasko DC, Shrout JD, Wong GC. Bacteria use type IV pili to walk upright and detach from surfaces. Science (New York, N.Y.). 330: 197. PMID 20929769 DOI: 10.1126/Science.1194238  0.4
2008 Smalyukh II, Butler J, Shrout JD, Parsek MR, Wong GC. Elasticity-mediated nematiclike bacterial organization in model extracellular DNA matrix. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 78: 030701. PMID 18850984 DOI: 10.1103/Physreve.78.030701  0.32
2008 Starner TD, Shrout JD, Parsek MR, Appelbaum PC, Kim G. Subinhibitory concentrations of azithromycin decrease nontypeable Haemophilus influenzae biofilm formation and Diminish established biofilms. Antimicrobial Agents and Chemotherapy. 52: 137-45. PMID 17954687 DOI: 10.1128/Aac.00607-07  0.38
2006 Shrout JD, Chopp DL, Just CL, Hentzer M, Givskov M, Parsek MR. The impact of quorum sensing and swarming motility on Pseudomonas aeruginosa biofilm formation is nutritionally conditional. Molecular Microbiology. 62: 1264-77. PMID 17059568 DOI: 10.1111/J.1365-2958.2006.05421.X  0.375
2006 Shrout JD, Parkin GF. Influence of electron donor, oxygen, and redox potential on bacterial perchlorate degradation Water Research. 40: 1191-1199. PMID 16522326 DOI: 10.1016/J.Watres.2006.01.035  0.644
2006 Shrout JD, Struckhoff GC, Parkin GF, Schnoor JL. Stimulation and molecular characterization of bacterial perchlorate degradation by plant-produced electron donors Environmental Science and Technology. 40: 310-317. PMID 16433366 DOI: 10.1021/Es051130G  0.633
2005 Shrout JD, Larese-Casanova P, Scherer MM, Alvarez PJ. Sustained and complete hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) degradation in zero-valent iron simulated barriers under different microbial conditions. Environmental Technology. 26: 1115-26. PMID 16342534 DOI: 10.1080/09593332608618474  0.325
2005 Sherburne LA, Shrout JD, Alvarez PJ. Hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) degradation by Acetobacterium paludosum. Biodegradation. 16: 539-47. PMID 15865346 DOI: 10.1007/S10532-004-6945-6  0.379
2005 Shrout JD, Scheetz TE, Casavant TL, Parkin GF. Isolation and characterization of autotrophic, hydrogen-utilizing, perchlorate-reducing bacteria Applied Microbiology and Biotechnology. 67: 261-268. PMID 15834721 DOI: 10.1007/S00253-004-1725-0  0.666
2005 Shrout JD, Williams AGB, Scherer MM, Parkin GF. Inhibition of bacterial perchlorate reduction by zero-valent iron Biodegradation. 16: 23-32. PMID 15727152 DOI: 10.1007/S10531-004-0354-3  0.626
2000 Zitomer DH, Shrout JD. High-sulfate, high-chemical oxygen demand wastewater treatment using aerated methanogenic fluidized beds Water Environment Research. 72: 90-97. DOI: 10.2175/106143000X137158  0.343
1997 Zitomer DH, Shrout JD. Feasibility and benefits of methanogenesis under oxygen-limited conditions Proceedings of the Industrial Waste Conference. 279-288. DOI: 10.1016/S0956-053X(98)00008-7  0.324
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