| Year |
Citation |
Score |
| 2023 |
Marlétaz F, Couloux A, Poulain J, Labadie K, Da Silva C, Mangenot S, Noel B, Poustka AJ, Dru P, Pegueroles C, Borra M, Lowe EK, Lhomond G, Besnardeau L, Le Gras S, ... ... Martinez P, et al. Analysis of the sea urchin genome highlights contrasting trends of genomic and regulatory evolution in deuterostomes. Cell Genomics. 3: 100295. PMID 37082140 DOI: 10.1016/j.xgen.2023.100295 |
0.759 |
|
| 2023 |
Botton-Amiot G, Martinez P, Sprecher SG. Associative learning in the cnidarian . Proceedings of the National Academy of Sciences of the United States of America. 120: e2220685120. PMID 36940325 DOI: 10.1073/pnas.2220685120 |
0.549 |
|
| 2023 |
Martinez P, Ustyantsev K, Biryukov M, Mouton S, Glasenburg L, Sprecher SG, Bailly X, Berezikov E. Genome assembly of the acoel flatworm Symsagittifera roscoffensis, a model for research on body plan evolution and photosymbiosis. G3 (Bethesda, Md.). 13. PMID 36542495 DOI: 10.1093/g3journal/jkac336 |
0.644 |
|
| 2022 |
Paganos P, Ronchi P, Carl J, Mizzon G, Martinez P, Benvenuto G, Arnone MI. Integrating single cell transcriptomics and volume electron microscopy confirms the presence of pancreatic acinar-like cells in sea urchins. Frontiers in Cell and Developmental Biology. 10: 991664. PMID 36060803 DOI: 10.3389/fcell.2022.991664 |
0.597 |
|
| 2020 |
Duruz J, Kaltenrieder C, Ladurner P, Bruggmann R, Martìnez P, Sprecher SG. Acoel single-cell transcriptomics: cell type analysis of a deep branching bilaterian. Molecular Biology and Evolution. PMID 33355655 DOI: 10.1093/molbev/msaa333 |
0.614 |
|
| 2020 |
Perea-Atienza E, Gavilán B, Sprecher SG, Martinez P. Immunostaining and In Situ Hybridization of the Developing Acoel Nervous System. Methods in Molecular Biology (Clifton, N.J.). 2047: 59-80. PMID 31552649 DOI: 10.1007/978-1-4939-9732-9_4 |
0.669 |
|
| 2020 |
Martinez P, Sprecher SG. Of circuits and brains: the origin and diversification of neural architectures Frontiers in Ecology and Evolution. 8: 82. DOI: 10.3389/Fevo.2020.00082 |
0.608 |
|
| 2019 |
Hartenstein V, Martinez P. Phagocytosis in cellular defense and nutrition: a food-centered approach to the evolution of macrophages. Cell and Tissue Research. PMID 31485720 DOI: 10.1007/S00441-019-03096-6 |
0.534 |
|
| 2019 |
Hartenstein V, Martinez P. Structure, development and evolution of the digestive system. Cell and Tissue Research. PMID 31478136 DOI: 10.1007/S00441-019-03102-X |
0.524 |
|
| 2019 |
Philippe H, Poustka AJ, Chiodin M, Hoff KJ, Dessimoz C, Tomiczek B, Schiffer PH, Müller S, Domman D, Horn M, Kuhl H, Timmermann B, Satoh N, Hikosaka-Katayama T, Nakano H, ... ... Martinez P, et al. Mitigating Anticipated Effects of Systematic Errors Supports Sister-Group Relationship between Xenacoelomorpha and Ambulacraria. Current Biology : Cb. PMID 31104936 DOI: 10.1016/J.Cub.2019.04.009 |
0.763 |
|
| 2019 |
Gavilán B, Sprecher SG, Hartenstein V, Martinez P. The digestive system of xenacoelomorphs. Cell and Tissue Research. PMID 31093756 DOI: 10.1007/S00441-019-03038-2 |
0.705 |
|
| 2018 |
Arnone MI, Oliveri P, Martinez P. A conceptual history of the "regulatory genome": From Theodor Boveri to Eric Davidson. Marine Genomics. PMID 30501998 DOI: 10.1016/J.Margen.2018.11.003 |
0.76 |
|
| 2018 |
Arboleda E, Hartenstein V, Martinez P, Reichert H, Sen S, Sprecher S, Bailly X. An Emerging System to Study Photosymbiosis Brain Regeneration, Chronobiology, and Behavior: The Marine Acoel Symsagittifera roscoffensis. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. e1800107. PMID 30151860 DOI: 10.1002/Bies.201800107 |
0.712 |
|
| 2018 |
Brauchle M, Bilican A, Eyer C, Bailly X, Martínez P, Ladurner P, Bruggmann R, Sprecher SG. Xenacoelomorpha survey reveals that all 11 animal homeobox gene classes were present in the first bilaterians. Genome Biology and Evolution. PMID 30102357 DOI: 10.1093/Gbe/Evy170 |
0.658 |
|
| 2018 |
Ben Khadra Y, Sugni M, Ferrario C, Bonasoro F, Oliveri P, Martinez P, Candia Carnevali MD. Regeneration in Stellate Echinoderms: Crinoidea, Asteroidea and Ophiuroidea. Results and Problems in Cell Differentiation. 65: 285-320. PMID 30083925 DOI: 10.1007/978-3-319-92486-1_14 |
0.648 |
|
| 2018 |
Perea-Atienza E, Sprecher SG, Martínez P. Characterization of the bHLH family of transcriptional regulators in the acoeland their putative role in neurogenesis. Evodevo. 9: 8. PMID 29610658 DOI: 10.1186/S13227-018-0097-Y |
0.661 |
|
| 2018 |
Ferrario C, Ben Khadra Y, Czarkwiani A, Zakrzewski A, Martinez P, Colombo G, Bonasoro F, Candia Carnevali MD, Oliveri P, Sugni M. Fundamental aspects of arm repair phase in two echinoderm models. Developmental Biology. 433: 297-309. PMID 29291979 DOI: 10.1016/J.Ydbio.2017.09.035 |
0.594 |
|
| 2018 |
Ballarin L, Rinkevich B, Bartscherer K, Burzynski A, Cambier S, Cammarata M, Domart-Coulon I, Drobne D, Encinas J, Frank U, Geneviere A, Hobmayer B, Löhelaid H, Lyons D, Martinez P, et al. Maristem—Stem Cells of Marine/Aquatic Invertebrates: From Basic Research to Innovative Applications Sustainability. 10: 526. DOI: 10.3390/Su10020526 |
0.594 |
|
| 2018 |
Martinez P. The Comparative Method in Biology and the Essentialist Trap Frontiers in Ecology and Evolution. 6. DOI: 10.3389/Fevo.2018.00130 |
0.333 |
|
| 2017 |
Altenburger A, Martinez P, Budd GE, Holmer LE. Gene Expression Patterns in Brachiopod Larvae Refute the "Brachiopod-Fold" Hypothesis. Frontiers in Cell and Developmental Biology. 5: 74. PMID 28879180 DOI: 10.3389/Fcell.2017.00074 |
0.354 |
|
| 2017 |
Ben Khadra Y, Sugni M, Ferrario C, Bonasoro F, Varela Coelho A, Martinez P, Candia Carnevali MD. An integrated view of asteroid regeneration: tissues, cells and molecules. Cell and Tissue Research. PMID 28331971 DOI: 10.1007/S00441-017-2589-9 |
0.37 |
|
| 2016 |
Byrne M, Martinez P, Morris V. Evolution of a pentameral body plan was not linked to translocation of anterior Hox genes: the echinoderm HOX cluster revisited. Evolution & Development. PMID 26763653 DOI: 10.1111/Ede.12172 |
0.356 |
|
| 2016 |
Gavilán B, Perea-Atienza E, Martínez P. Xenacoelomorpha: a case of independent nervous system centralization? Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 371. PMID 26598722 DOI: 10.1098/Rstb.2015.0039 |
0.396 |
|
| 2015 |
Chang YC, Pai CY, Chen YC, Ting HC, Martinez P, Telford MJ, Yu JK, Su YH. Regulatory circuit rewiring and functional divergence of the duplicate admp genes in dorsoventral axial patterning. Developmental Biology. PMID 26719126 DOI: 10.1016/J.Ydbio.2015.12.015 |
0.689 |
|
| 2015 |
Sprecher SG, Bernardo-Garcia FJ, van Giesen L, Hartenstein V, Reichert H, Neves R, Bailly X, Martinez P, Brauchle M. Functional brain regeneration in the acoel worm Symsagittifera roscoffensis. Biology Open. PMID 26581588 DOI: 10.1242/Bio.014266 |
0.687 |
|
| 2015 |
Gabre JL, Martinez P, Nilsson Sköld H, Ortega-Martinez O, Abril JF. The coelomic epithelium transcriptome from a clonal sea star, Coscinasterias muricata. Marine Genomics. PMID 26321383 DOI: 10.1016/J.Margen.2015.07.010 |
0.666 |
|
| 2015 |
Perea-Atienza E, Gavilán B, Chiodin M, Abril JF, Hoff KJ, Poustka AJ, Martinez P. The nervous system of Xenacoelomorpha: a genomic perspective. The Journal of Experimental Biology. 218: 618-28. PMID 25696825 DOI: 10.1242/Jeb.110379 |
0.789 |
|
| 2015 |
Golicz AA, Martinez PA, Zander M, Patel DA, Van De Wouw AP, Visendi P, Fitzgerald TL, Edwards D, Batley J. Gene loss in the fungal canola pathogen Leptosphaeria maculans. Functional & Integrative Genomics. 15: 189-96. PMID 25421464 DOI: 10.1007/s10142-014-0412-1 |
0.313 |
|
| 2014 |
Annunziata R, Perillo M, Andrikou C, Cole AG, Martinez P, Arnone MI. Pattern and process during sea urchin gut morphogenesis: the regulatory landscape. Genesis (New York, N.Y. : 2000). 52: 251-68. PMID 24376127 DOI: 10.1002/Dvg.22738 |
0.658 |
|
| 2014 |
Ben Khadra Y, Said K, Thorndyke M, Martinez P. Homeobox genes expressed during echinoderm arm regeneration. Biochemical Genetics. 52: 166-80. PMID 24309817 DOI: 10.1007/S10528-013-9637-2 |
0.437 |
|
| 2013 |
Perea-Atienza E, Botta M, Salvenmoser W, Gschwentner R, Egger B, Kristof A, Martinez P, Achatz JG. Posterior regeneration in Isodiametra pulchra (Acoela, Acoelomorpha). Frontiers in Zoology. 10: 64. PMID 24160844 DOI: 10.1186/1742-9994-10-64 |
0.366 |
|
| 2013 |
Achatz JG, Chiodin M, Salvenmoser W, Tyler S, Martinez P. The Acoela: on their kind and kinships, especially with nemertodermatids and xenoturbellids (Bilateria incertae sedis). Organisms, Diversity & Evolution. 13: 267-286. PMID 24098090 DOI: 10.1007/S13127-012-0112-4 |
0.771 |
|
| 2013 |
Annunziata R, Martinez P, Arnone MI. Intact cluster and chordate-like expression of ParaHox genes in a sea star. Bmc Biology. 11: 68. PMID 23803323 DOI: 10.1186/1741-7007-11-68 |
0.7 |
|
| 2013 |
Chiodin M, Børve A, Berezikov E, Ladurner P, Martinez P, Hejnol A. Mesodermal gene expression in the acoel Isodiametra pulchra indicates a low number of mesodermal cell types and the endomesodermal origin of the gonads. Plos One. 8: e55499. PMID 23405161 DOI: 10.1371/Journal.Pone.0055499 |
0.789 |
|
| 2012 |
Achatz JG, Martinez P. The nervous system of Isodiametra pulchra (Acoela) with a discussion on the neuroanatomy of the Xenacoelomorpha and its evolutionary implications. Frontiers in Zoology. 9: 27. PMID 23072457 DOI: 10.1186/1742-9994-9-27 |
0.359 |
|
| 2011 |
Moreno E, Permanyer J, Martinez P. The origin of patterning systems in bilateria-insights from the Hox and ParaHox genes in Acoelomorpha. Genomics, Proteomics & Bioinformatics. 9: 65-76. PMID 21802044 DOI: 10.1016/S1672-0229(11)60010-7 |
0.444 |
|
| 2011 |
Altenburger A, Martinez P, Wanninger A. Homeobox gene expression in Brachiopoda: the role of Not and Cdx in bodyplan patterning, neurogenesis, and germ layer specification. Gene Expression Patterns : Gep. 11: 427-36. PMID 21782038 DOI: 10.1016/J.Gep.2011.07.001 |
0.637 |
|
| 2011 |
Chiodin M, Achatz JG, Wanninger A, Martinez P. Molecular architecture of muscles in an acoel and its evolutionary implications. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 316: 427-39. PMID 21538843 DOI: 10.1002/Jez.B.21416 |
0.755 |
|
| 2010 |
Semmler H, Chiodin M, Bailly X, Martinez P, Wanninger A. Steps towards a centralized nervous system in basal bilaterians: insights from neurogenesis of the acoel Symsagittifera roscoffensis. Development, Growth & Differentiation. 52: 701-13. PMID 20874714 DOI: 10.1111/J.1440-169X.2010.01207.X |
0.773 |
|
| 2010 |
Ruano Y, Mollejo M, de Lope AR, Hernández-Moneo JL, Martínez P, Meléndez B. Microarray-based comparative genomic hybridization (array-CGH) as a useful tool for identifying genes involved in Glioblastoma (GB). Methods in Molecular Biology (Clifton, N.J.). 653: 35-45. PMID 20721736 DOI: 10.1007/978-1-60761-759-4_3 |
0.402 |
|
| 2010 |
Moreno E, De Mulder K, Salvenmoser W, Ladurner P, Martínez P. Inferring the ancestral function of the posterior Hox gene within the bilateria: controlling the maintenance of reproductive structures, the musculature and the nervous system in the acoel flatworm Isodiametra pulchra. Evolution & Development. 12: 258-66. PMID 20565536 DOI: 10.1111/J.1525-142X.2010.00411.X |
0.425 |
|
| 2010 |
Bery A, Cardona A, Martinez P, Hartenstein V. Structure of the central nervous system of a juvenile acoel, Symsagittifera roscoffensis. Development Genes and Evolution. 220: 61-76. PMID 20549514 DOI: 10.1007/S00427-010-0328-2 |
0.757 |
|
| 2010 |
Ferrier DE, Martinez P. Evolutionary Developmental Genomics: at the 2008 meeting of the European Society for Evolutionary Developmental Biology. Genomics. 95: 247-9. PMID 19615437 DOI: 10.1016/J.Ygeno.2009.07.001 |
0.364 |
|
| 2009 |
Moreno E, Nadal M, Baguñà J, Martínez P. Tracking the origins of the bilaterian Hox patterning system: insights from the acoel flatworm Symsagittifera roscoffensis. Evolution & Development. 11: 574-81. PMID 19754713 DOI: 10.1111/J.1525-142X.2009.00363.X |
0.789 |
|
| 2009 |
Cole AG, Rizzo F, Martinez P, Fernandez-Serra M, Arnone MI. Two ParaHox genes, SpLox and SpCdx, interact to partition the posterior endoderm in the formation of a functional gut. Development (Cambridge, England). 136: 541-9. PMID 19144720 DOI: 10.1242/Dev.029959 |
0.668 |
|
| 2007 |
Sempere LF, Martinez P, Cole C, Baguñà J, Peterson KJ. Phylogenetic distribution of microRNAs supports the basal position of acoel flatworms and the polyphyly of Platyhelminthes Evolution and Development. 9: 409-415. PMID 17845513 DOI: 10.1111/J.1525-142X.2007.00180.X |
0.748 |
|
| 2007 |
Philippe H, Brinkmann H, Martinez P, Riutort M, Baguñà J. Acoel flatworms are not Platyhelminthes: Evidence from phylogenomics Plos One. 2. PMID 17684563 DOI: 10.1371/Journal.Pone.0000717 |
0.761 |
|
| 2007 |
Mendoza-Mendoza A, Rosales-Saavedra T, Cortés C, Castellanos-Juárez V, Martínez P, Herrera-Estrella A. The MAP kinase TVK1 regulates conidiation, hydrophobicity and the expression of genes encoding cell wall proteins in the fungus Trichoderma virens. Microbiology. 153: 2137-2147. PMID 17600058 DOI: 10.1099/Mic.0.2006/005462-0 |
0.36 |
|
| 2006 |
Sodergren E, Weinstock GM, Davidson EH, Cameron RA, Gibbs RA, Angerer RC, Angerer LM, Arnone MI, Burgess DR, Burke RD, Coffman JA, Dean M, Elphick MR, Ettensohn CA, ... ... Martinez P, et al. The genome of the sea urchin Strongylocentrotus purpuratus. Science (New York, N.Y.). 314: 941-52. PMID 17095691 DOI: 10.1126/Science.1133609 |
0.721 |
|
| 2006 |
Arnone MI, Rizzo F, Annunciata R, Cameron RA, Peterson KJ, Martínez P. Genetic organization and embryonic expression of the ParaHox genes in the sea urchin S. purpuratus: insights into the relationship between clustering and colinearity. Developmental Biology. 300: 63-73. PMID 16959236 DOI: 10.1016/J.Ydbio.2006.07.037 |
0.745 |
|
| 2006 |
Cameron RA, Rowen L, Nesbitt R, Bloom S, Rast JP, Berney K, Arenas-Mena C, Martinez P, Lucas S, Richardson PM, Davidson EH, Peterson KJ, Hood L. Unusual gene order and organization of the sea urchin hox cluster. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 306: 45-58. PMID 16116652 DOI: 10.1002/Jez.B.21070 |
0.698 |
|
| 2005 |
Wilson K, Thorndyke M, Nilsen F, Rogers A, Martinez P. Marine systems: Moving into the genomics era Marine Ecology. 26: 3-16. DOI: 10.1111/J.1439-0485.2005.00041.X |
0.353 |
|
| 2003 |
Long S, Martinez P, Chen WC, Thorndyke M, Byrne M. Evolution of echinoderms may not have required modification of the ancestral deuterostome HOX gene cluster: first report of PG4 and PG5 Hox orthologues in echinoderms. Development Genes and Evolution. 213: 573-6. PMID 13680225 DOI: 10.1007/S00427-003-0355-3 |
0.372 |
|
| 2003 |
Nielsen C, Martinez P. Patterns of gene expression: Homology or homocracy? Development Genes and Evolution. 213: 149-154. PMID 12690454 DOI: 10.1007/S00427-003-0301-4 |
0.345 |
|
| 2002 |
Martinez P, Amemiya CT. Genomics of the HOX gene cluster Comparative Biochemistry and Physiology - B Biochemistry and Molecular Biology. 133: 571-580. PMID 12470820 DOI: 10.1016/S1096-4959(02)00121-5 |
0.397 |
|
| 2000 |
Fernandez-Funez P, Nino-Rosales ML, de Gouyon B, She WC, Luchak JM, Martinez P, Turiegano E, Benito J, Capovilla M, Skinner PJ, McCall A, Canal I, Orr HT, Zoghbi HY, Botas J. Identification of genes that modify ataxin-1-induced neurodegeneration. Nature. 408: 101-6. PMID 11081516 DOI: 10.1038/35040584 |
0.305 |
|
| 2000 |
Cameron RA, Mahairas G, Rast JP, Martinez P, Biondi TR, Swartzell S, Wallace JC, Poustka AJ, Livingston BT, Wray GA, Ettensohn CA, Lehrach H, Britten RJ, Davidson EH, Hood L. A sea urchin genome project: sequence scan, virtual map, and additional resources. Proceedings of the National Academy of Sciences of the United States of America. 97: 9514-8. PMID 10920195 DOI: 10.1073/Pnas.160261897 |
0.575 |
|
| 1999 |
García-Domingo D, Leonardo E, Grandien A, Martínez P, Albar JP, Izpisúa-Belmonte JC, Martínez-A C. DIO-1 is a gene involved in onset of apoptosis in vitro, whose misexpression disrupts limb development Proceedings of the National Academy of Sciences of the United States of America. 96: 7992-7997. PMID 10393935 DOI: 10.1073/Pnas.96.14.7992 |
0.325 |
|
| 1999 |
Martinez P, Rast JP, Arenas-Mena C, Davidson EH. Organization of an echinoderm Hox gene cluster. Proceedings of the National Academy of Sciences of the United States of America. 96: 1469-74. PMID 9990047 DOI: 10.1073/Pnas.96.4.1469 |
0.576 |
|
| 1998 |
Arenas-Mena C, Martinez P, Cameron RA, Davidson EH. Expression of the Hox gene complex in the indirect development of a sea urchin. Proceedings of the National Academy of Sciences of the United States of America. 95: 13062-7. PMID 9789041 DOI: 10.1073/Pnas.95.22.13062 |
0.554 |
|
| 1997 |
Martinez P, Lee JC, Davidson EH. Complete sequence of SpHox8 and its linkage in the single Hox gene cluster of Strongylocentrotus purpuratus. Journal of Molecular Evolution. 44: 371-7. PMID 9089076 DOI: 10.1007/Pl00006156 |
0.569 |
|
| 1997 |
Martinez P, Davidson EH. SpHmx, a sea urchin homeobox gene expressed in embryonic pigment cells. Developmental Biology. 181: 213-22. PMID 9013931 DOI: 10.1006/Dbio.1996.8461 |
0.579 |
|
| 1996 |
Ponte I, Monsalves C, Cabañas M, Martínez P, Suau P. Sequence simplicity and evolution of the 3′ untranslated region of the histone H1° Gene Journal of Molecular Evolution. 43: 125-134. PMID 8660437 DOI: 10.1007/Bf02337357 |
0.337 |
|
| 1995 |
Martinez P, Vidal J, Monsalves C, Pérez M, Pucket C, Ponte I, Suau P. Cloning and analysis of the coding region of the histone H1° -encoding gene from rat PC12 cells Gene. 166: 313-316. PMID 8543182 DOI: 10.1016/0378-1119(95)00594-3 |
0.329 |
|
| 1994 |
Ponte I, Martínez P, Ramírez A, Jorcano J, Monzó M, Suau P. Transcriptional activation of Histone H1° during neuronal terminal differentiation Developmental Brain Research. 80: 35-44. PMID 7955358 DOI: 10.1016/0165-3806(94)90087-6 |
0.332 |
|
| 1994 |
Yuh CH, Ransick A, Martinez P, Britten RJ, Davidson EH. Complexity and organization of DNA-protein interactions in the 5'-regulatory region of an endoderm-specific marker gene in the sea urchin embryo. Mechanisms of Development. 47: 165-86. PMID 7811639 DOI: 10.1016/0925-4773(94)90088-4 |
0.518 |
|
| 1993 |
Martínez JC, Piris MA, Sánchez‐Beato M, Villuendas R, Orradre JL, Algara P, Sánchez‐Verde L, Martínez P. Retinoblastoma (rb) gene product expression in lymphomas. Correlation with Ki67 growth fraction The Journal of Pathology. 169: 405-412. PMID 8501537 DOI: 10.1002/Path.1711690404 |
0.35 |
|
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