Srinjan Basu, Ph.D. - Publications

Affiliations: 
2012 Biology, Molecular and Cellular Harvard University, Cambridge, MA, United States 
Area:
Biochemistry

15 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2018 Basu S, Needham LM, Lando D, Taylor EJR, Wohlfahrt KJ, Shah D, Boucher W, Tan YL, Bates LE, Tkachenko O, Cramard J, Lagerholm BC, Eggeling C, Hendrich B, Klenerman D, et al. FRET-enhanced photostability allows improved single-molecule tracking of proteins and protein complexes in live mammalian cells. Nature Communications. 9: 2520. PMID 29955052 DOI: 10.1038/S41467-018-04486-0  0.377
2018 Lando D, Basu S, Stevens TJ, Riddell A, Wohlfahrt KJ, Cao Y, Boucher W, Leeb M, Atkinson LP, Lee SF, Hendrich B, Klenerman D, Laue ED. Combining fluorescence imaging with Hi-C to study 3D genome architecture of the same single cell. Nature Protocols. 13: 1034-1061. PMID 29674753 DOI: 10.1038/Nprot.2018.017  0.445
2018 Lando D, Stevens TJ, Basu S, Laue ED. Calculation of 3D genome structures for comparison of chromosome conformation capture experiments with microscopy: An evaluation of single-cell Hi-C protocols. Nucleus (Austin, Tex.). 0. PMID 29431585 DOI: 10.1080/19491034.2018.1438799  0.324
2017 Carr AR, Ponjavic A, Basu S, McColl J, Santos AM, Davis S, Laue ED, Klenerman D, Lee SF. Three-Dimensional Super-Resolution in Eukaryotic Cells Using the Double-Helix Point Spread Function. Biophysical Journal. 112: 1444-1454. PMID 28402886 DOI: 10.1016/J.Bpj.2017.02.023  0.463
2017 Stevens TJ, Lando D, Basu S, Atkinson LP, Cao Y, Lee SF, Leeb M, Wohlfahrt KJ, Boucher W, O'Shaughnessy-Kirwan A, Cramard J, Faure AJ, Ralser M, Blanco E, Morey L, et al. 3D structures of individual mammalian genomes studied by single-cell Hi-C. Nature. PMID 28289288 DOI: 10.1038/Nature21429  0.337
2016 Zhou Y, Basu S, Wohlfahrt KJ, Lee SF, Klenerman D, Laue ED, Seshia AA. A microfluidic platform for trapping, releasing and super-resolution imaging of single cells. Sensors and Actuators. B, Chemical. 232: 680-691. PMID 27594767 DOI: 10.1016/J.Snb.2016.03.131  0.387
2016 Zhou Y, Basu S, Laue ED, Seshia AA. Dynamic monitoring of single cell lysis in an impedance-based microfluidic device. Biomedical Microdevices. 18: 56. PMID 27299468 DOI: 10.1007/S10544-016-0081-Z  0.327
2016 Basu S, Tan YL, Taylor EJ, Laue ED, Lee SF. Studying the Dynamics of Chromatin-Binding Proteins in Mammalian Cells Using Single-Molecule Localisation Microscopy. Methods in Molecular Biology (Clifton, N.J.). 1431: 235-63. PMID 27283313 DOI: 10.1007/978-1-4939-3631-1_17  0.393
2016 Zhang W, Aubert A, Gomez de Segura JM, Karuppasamy M, Basu S, Murthy A, Diamante A, Drury TA, Balmer J, Cramard J, Watson AA, Lando D, Lee SF, Palayret M, Kloet S, et al. The Nucleosome Remodeling and Deacetylase Complex NuRD is built from preformed catalytically active sub-modules. Journal of Molecular Biology. PMID 27117189 DOI: 10.1016/J.Jmb.2016.04.025  0.307
2016 Zhou Y, Basu S, Laue E, Seshia AA. Single cell studies of mouse embryonic stem cell (mESC) differentiation by electrical impedance measurements in a microfluidic device. Biosensors & Bioelectronics. 81: 249-258. PMID 26963790 DOI: 10.1016/J.Bios.2016.02.069  0.358
2016 Needham L, Basu S, Taylor E, Laue ED, Klenerman D, Lando D, Lee SF. Improved Photo Physical Properties of mEos3 for Single Molecule Tracking Biophysical Journal. 110: 485a-486a. DOI: 10.1016/J.Bpj.2015.11.2596  0.324
2015 Lu FK, Basu S, Igras V, Hoang MP, Ji M, Fu D, Holtom GR, Neel VA, Freudiger CW, Fisher DE, Xie XS. Label-free DNA imaging in vivo with stimulated Raman scattering microscopy. Proceedings of the National Academy of Sciences of the United States of America. PMID 26324899 DOI: 10.1073/Pnas.1515121112  0.638
2015 Palayret M, Armes H, Basu S, Watson AT, Herbert A, Lando D, Etheridge TJ, Endesfelder U, Heilemann M, Laue E, Carr AM, Klenerman D, Lee SF. Virtual-'light-sheet' single-molecule localisation microscopy enables quantitative optical sectioning for super-resolution imaging. Plos One. 10: e0125438. PMID 25884495 DOI: 10.1371/Journal.Pone.0125438  0.44
2013 Gebhardt JC, Suter DM, Roy R, Zhao ZW, Chapman AR, Basu S, Maniatis T, Xie XS. Single-molecule imaging of transcription factor binding to DNA in live mammalian cells. Nature Methods. 10: 421-6. PMID 23524394 DOI: 10.1038/Nmeth.2411  0.591
2012 Zhang X, Roeffaers MB, Basu S, Daniele JR, Fu D, Freudiger CW, Holtom GR, Xie XS. Label-free live-cell imaging of nucleic acids using stimulated Raman scattering microscopy. Chemphyschem : a European Journal of Chemical Physics and Physical Chemistry. 13: 1054-9. PMID 22368112 DOI: 10.1002/Cphc.201100890  0.596
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