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Oren Tzfadia, Ph.D. - Publications

Affiliations: 
2011 Biology City University of New York, New York, NY, United States 
Area:
Plant Culture Agriculture, Bioinformatics Biology, Plant Physiology
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21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Olayide P, Alexandersson E, Tzfadia O, Lenman M, Gisel A, Stavolone L. Transcriptome and metabolome profiling identify factors potentially involved in pro-vitamin A accumulation in cassava landraces. Plant Physiology and Biochemistry : Ppb. 199: 107713. PMID 37126903 DOI: 10.1016/j.plaphy.2023.107713  0.339
2021 Allelign Ashagre H, Zaltzman D, Idan-Molakandov A, Romano H, Tzfadia O, Harpaz-Saad S. FASCICLIN-LIKE 18 Is a New Player Regulating Root Elongation in . Frontiers in Plant Science. 12: 645286. PMID 33897736 DOI: 10.3389/fpls.2021.645286  0.303
2020 Singh P, Kalunke RM, Shukla A, Tzfadia O, Thulasiram HV, Giri AP. Biosynthesis and tissue-specific partitioning of camphor and eugenol in Ocimum kilimandscharicum. Phytochemistry. 177: 112451. PMID 32619737 DOI: 10.1016/J.Phytochem.2020.112451  0.43
2018 Tzfadia O, Bocobza S, Defoort J, Almekias-Siegl E, Panda S, Levy M, Storme V, Rombauts S, Jaitin DA, Keren-Shaul H, de Peer YV, Aharoni A. The 'TranSeq' 3' End Sequencing Method for High-Throughput Transcriptomics and Gene Space Refinement in Plant Genomes. The Plant Journal : For Cell and Molecular Biology. PMID 29979480 DOI: 10.1111/Tpj.14015  0.375
2018 Ramšak Ž, Coll A, Stare T, Tzfadia O, Baebler Š, Van de Peer Y, Gruden K. Network modelling unravels mechanisms of crosstalk between ethylene and salicylate signalling in potato. Plant Physiology. PMID 29934298 DOI: 10.1104/Pp.18.00450  0.342
2018 Zwaenepoel A, Diels T, Amar D, Van Parys T, Shamir R, Van de Peer Y, Tzfadia O. MorphDB: Prioritizing Genes for Specialized Metabolism Pathways and Gene Ontology Categories in Plants. Frontiers in Plant Science. 9: 352. PMID 29616063 DOI: 10.3389/Fpls.2018.00352  0.493
2018 Galpaz N, Gonda I, Shem-Tov D, Barad O, Tzuri G, Lev S, Fei Z, Xu Y, Lombardi N, Mao L, Jiao C, Harel-Beja R, Doron-Faigenboim A, Tzfadia O, Bar E, et al. Deciphering Genetic Factors that Determine Melon Fruit-Quality Traits Using RNA-Seq-Based High-Resolution QTL and eQTL Mapping. The Plant Journal : For Cell and Molecular Biology. PMID 29385635 DOI: 10.1111/Tpj.13838  0.377
2016 Lashbrooke JG, Cohen H, Levy-Samocha D, Tzfadia O, Panizel I, Zeisler V, Massalha H, Stern A, Trainotti L, Schreiber L, Costa F, Aharoni A. MYB107 and MYB9 Homologs Regulate Suberin Deposition in Angiosperms. The Plant Cell. PMID 27604696 DOI: 10.1105/Tpc.16.00490  0.388
2016 Fernandez-Moreno JP, Tzfadia O, Forment J, Presa S, Rogachev I, Meir S, Orzaez D, Aharoni A, Granell A. Characterization of a new pink fruit tomato mutant result in the identification of a null allele of the SlMYB12 transcription factor. Plant Physiology. PMID 27208285 DOI: 10.1104/Pp.16.00282  0.418
2016 Xie Q, Tzfadia O, Levy M, Weithorn E, Peled-Zehavi H, Van Parys T, Van de Peer Y, Galili G. hfAIM: A reliable bioinformatics approach for in silico genome-wide identification of autophagy-associated Atg8-interacting motifs in various organisms. Autophagy. 1-12. PMID 27071037 DOI: 10.1080/15548627.2016.1147668  0.342
2015 Tzfadia O, Diels T, De Meyer S, Vandepoele K, Aharoni A, Van de Peer Y. CoExpNetViz: Comparative Co-Expression Networks Construction and Visualization Tool. Frontiers in Plant Science. 6: 1194. PMID 26779228 DOI: 10.3389/Fpls.2015.01194  0.418
2015 Amar D, Frades I, Diels T, Zaltzman D, Ghatan N, Hedley PE, Alexandersson E, Tzfadia O, Shamir R. The MORPH-R web server and software tool for predicting missing genes in biological pathways. Physiologia Plantarum. 155: 12-20. PMID 25625434 DOI: 10.1111/Ppl.12326  0.439
2015 Toubiana D, Batushansky A, Tzfadia O, Scossa F, Khan A, Barak S, Zamir D, Fernie AR, Nikoloski Z, Fait A. Combined correlation-based network and mQTL analyses efficiently identified loci for branched-chain amino acid, serine to threonine, and proline metabolism in tomato seeds. The Plant Journal : For Cell and Molecular Biology. 81: 121-33. PMID 25359542 DOI: 10.1111/Tpj.12717  0.385
2014 Amar D, Frades I, Danek A, Goldberg T, Sharma SK, Hedley PE, Proux-Wera E, Andreasson E, Shamir R, Tzfadia O, Alexandersson E. Evaluation and integration of functional annotation pipelines for newly sequenced organisms: the potato genome as a test case. Bmc Plant Biology. 14: 329. PMID 25476999 DOI: 10.1186/S12870-014-0329-9  0.343
2014 Rosenwasser S, Mausz MA, Schatz D, Sheyn U, Malitsky S, Aharoni A, Weinstock E, Tzfadia O, Ben-Dor S, Feldmesser E, Pohnert G, Vardi A. Rewiring Host Lipid Metabolism by Large Viruses Determines the Fate of Emiliania huxleyi, a Bloom-Forming Alga in the Ocean. The Plant Cell. 26: 2689-2707. PMID 24920329 DOI: 10.1105/Tpc.114.125641  0.356
2014 Rosenwasser S, Van Creveld SG, Schatz D, Malitsky S, Tzfadia O, Aharoni A, Levin Y, Gabashvili A, Feldmesser E, Vardi A. Mapping the diatom redox-sensitive proteome provides insight into response to nitrogen stress in the marine environment Proceedings of the National Academy of Sciences of the United States of America. 111: 2740-2745. PMID 24550302 DOI: 10.1073/Pnas.1319773111  0.354
2013 Itkin M, Heinig U, Tzfadia O, Bhide AJ, Shinde B, Cardenas PD, Bocobza SE, Unger T, Malitsky S, Finkers R, Tikunov Y, Bovy A, Chikate Y, Singh P, Rogachev I, et al. Biosynthesis of antinutritional alkaloids in solanaceous crops is mediated by clustered genes. Science (New York, N.Y.). 341: 175-9. PMID 23788733 DOI: 10.1126/Science.1240230  0.408
2012 Tzfadia O, Amar D, Bradbury LMT, Wurtzel ET, Shamir R. The MORPH algorithm: Ranking candidate genes for membership in arabidopsis and tomato pathwaysC W Plant Cell. 24: 4389-4406. PMID 23204403 DOI: 10.1105/Tpc.112.104513  0.629
2012 Bradbury LM, Shumskaya M, Tzfadia O, Wu SB, Kennelly EJ, Wurtzel ET. Lycopene cyclase paralog CruP protects against reactive oxygen species in oxygenic photosynthetic organisms. Proceedings of the National Academy of Sciences of the United States of America. 109: E1888-97. PMID 22706644 DOI: 10.1073/Pnas.1206002109  0.597
2011 Meier S, Tzfadia O, Vallabhaneni R, Gehring C, Wurtzel ET. A transcriptional analysis of carotenoid, chlorophyll and plastidial isoprenoid biosynthesis genes during development and osmotic stress responses in Arabidopsis thaliana. Bmc Systems Biology. 5: 77. PMID 21595952 DOI: 10.1186/1752-0509-5-77  0.579
2009 Li F, Tzfadia O, Wurtzel ET. The phytoene synthase gene family in the Grasses: Subfunctionalization provides tissue-specific control of carotenogenesis Plant Signaling and Behavior. 4: 208-211.  0.38
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