George M. Weinstock - Publications

The University of Texas Graduate School of Biomedical Sciences at Houston 
Molecular Biology, Genetics, Computer Science

361 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Zhou JJ, Zhai J, Zhou H, Chen Y, Guerra S, Robey I, Weinstock GM, Weinstock E, Dong Q, Knox KS, Twigg Iii HL. Supraglottic Lung Microbiome Taxa Are Associated with Pulmonary Abnormalities in an HIV Longitudinal Cohort. American Journal of Respiratory and Critical Care Medicine. PMID 32783620 DOI: 10.1164/Rccm.202004-1086Le  0.4
2020 Spakowicz D, Lou S, Barron B, Gomez JL, Li T, Liu Q, Grant N, Yan X, Hoyd R, Weinstock G, Chupp GL, Gerstein M. Approaches for integrating heterogeneous RNA-seq data reveal cross-talk between microbes and genes in asthmatic patients. Genome Biology. 21: 150. PMID 32571363 DOI: 10.1186/S13059-020-02033-Z  0.32
2020 Zhou X, Johnson JS, Spakowicz D, Zhou W, Zhou Y, Sodergren E, Snyder M, Weinstock GM. Longitudinal Analysis of Serum Cytokine Levels and Gut Microbial Abundance Links IL-17/IL-22 with and Insulin Sensitivity in Humans. Diabetes. PMID 32366680 DOI: 10.2337/Db19-0592  1
2020 Bubier JA, Philip VM, Quince C, Campbell J, Zhou Y, Vishnivetskaya T, Duvvuru S, Hageman Blair R, Ndukum J, Donohue KD, Foster CM, Mellert DJ, Weinstock G, Culiat CT, O'Hara B, et al. A Microbe Associated with Sleep Revealed by a Novel Systems-Genetic Analysis of the Microbiome in Collaborative Cross Mice. Genetics. PMID 31896565 DOI: 10.1534/Genetics.119.303013  0.32
2019 Yang D, Johnson J, Zhou X, Deych E, Shands B, Hanson B, Sodergren E, Weinstock G, Shannon WD. New statistical method identifies cytokines that distinguish stool microbiomes. Scientific Reports. 9: 20082. PMID 31882682 DOI: 10.1038/S41598-019-56397-9  0.48
2019 Zhou Y, Jackson D, Bacharier LB, Mauger D, Boushey H, Castro M, Durack J, Huang Y, Lemanske RF, Storch GA, Weinstock GM, Wylie K, Covar R, Fitzpatrick AM, Phipatanakul W, et al. The upper-airway microbiota and loss of asthma control among asthmatic children. Nature Communications. 10: 5714. PMID 31844063 DOI: 10.1038/S41467-019-13698-X  0.44
2019 Chen Y, Nakanishi M, Bautista EJ, Qendro V, Sodergren E, Rosenberg DW, Weinstock GM. Colon cancer prevention with walnuts: A longitudinal study in mice from the perspective of a gut enterotype-like cluster. Cancer Prevention Research (Philadelphia, Pa.). PMID 31818852 DOI: 10.1158/1940-6207.Capr-19-0273  0.48
2019 Hong BY, Ideta T, Lemos BS, Igarashi Y, Tan Y, DiSiena M, Mo A, Birk JW, Forouhar F, Devers TJ, Weinstock GM, Rosenberg DW. Characterization of Mucosal Dysbiosis of Early Colonic Neoplasia. Npj Precision Oncology. 3: 29. PMID 31754633 DOI: 10.1038/s41698-019-0101-6  0.4
2019 Johnson JS, Spakowicz DJ, Hong BY, Petersen LM, Demkowicz P, Chen L, Leopold SR, Hanson BM, Agresta HO, Gerstein M, Sodergren E, Weinstock GM. Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis. Nature Communications. 10: 5029. PMID 31695033 DOI: 10.1038/S41467-019-13036-1  0.48
2019 Schwimmer JB, Johnson JS, Angeles JE, Behling C, Belt PH, Borecki I, Bross C, Durelle J, Goyal NP, Hamilton G, Holtz ML, Lavine JE, Mitreva M, Newton KP, Pan A, ... ... Weinstock G, et al. Microbiome Signatures Associated with Steatohepatitis and Moderate to Severe Fibrosis in Children With Nonalcoholic Fatty Liver Disease. Gastroenterology. PMID 31255652 DOI: 10.1053/J.Gastro.2019.06.028  1
2019 Zhou W, Sailani MR, Contrepois K, Zhou Y, Ahadi S, Leopold SR, Zhang MJ, Rao V, Avina M, Mishra T, Johnson J, Lee-McMullen B, Chen S, Metwally AA, Tran TDB, ... ... Weinstock GM, et al. Longitudinal multi-omics of host-microbe dynamics in prediabetes. Nature. 569: 663-671. PMID 31142858 DOI: 10.1038/S41586-019-1236-X  1
2019 Schüssler-Fiorenza Rose SM, Contrepois K, Moneghetti KJ, Zhou W, Mishra T, Mataraso S, Dagan-Rosenfeld O, Ganz AB, Dunn J, Hornburg D, Rego S, Perelman D, Ahadi S, Sailani MR, Zhou Y, ... ... Weinstock GM, et al. A longitudinal big data approach for precision health. Nature Medicine. 25: 792-804. PMID 31068711 DOI: 10.1038/S41591-019-0414-6  1
2019 Belcaid M, Casaburi G, McAnulty SJ, Schmidbaur H, Suria AM, Moriano-Gutierrez S, Pankey MS, Oakley TH, Kremer N, Koch EJ, Collins AJ, Nguyen H, Lek S, Goncharenko-Foster I, Minx P, ... ... Weinstock G, et al. Symbiotic organs shaped by distinct modes of genome evolution in cephalopods. Proceedings of the National Academy of Sciences of the United States of America. PMID 30635418 DOI: 10.1073/Pnas.1817322116  0.48
2018 Mahdavinia M, Rasmussen HE, Botha M, Binh Tran TD, Van den Berg JP, Sodergren E, Davis E, Engen K, Gray C, Lunjani N, Hlela C, Preite N, Basera W, Hobane L, Watkins A, ... ... Weinstock G, et al. Effects of diet on the childhood gut microbiome and its implications for atopic dermatitis. The Journal of Allergy and Clinical Immunology. PMID 30578881 DOI: 10.1016/J.Jaci.2018.11.034  0.48
2018 Savage JH, Lee-Sarwar KA, Sordillo JE, Lange NE, Zhou Y, O'Connor GT, Sandel M, Bacharier LB, Zeiger R, Sodergren E, Weinstock GM, Gold DR, Weiss ST, Litonjua AA. Diet during Pregnancy and Infancy and the Infant Intestinal Microbiome. The Journal of Pediatrics. PMID 30173873 DOI: 10.1016/J.Jpeds.2018.07.066  0.48
2018 Cignarella F, Cantoni C, Ghezzi L, Salter A, Dorsett Y, Chen L, Phillips D, Weinstock GM, Fontana L, Cross AH, Zhou Y, Piccio L. Intermittent Fasting Confers Protection in CNS Autoimmunity by Altering the Gut Microbiota. Cell Metabolism. 27: 1222-1235.e6. PMID 29874567 DOI: 10.1016/J.Cmet.2018.05.006  0.48
2018 Schechter LM, Creely DP, Garner CD, Shortridge D, Nguyen H, Chen L, Hanson BM, Sodergren E, Weinstock GM, Dunne WM, van Belkum A, Leopold SR. Extensive Gene Amplification as a Mechanism for Piperacillin-Tazobactam Resistance in Escherichia coli. Mbio. 9. PMID 29691340 DOI: 10.1128/Mbio.00583-18  1
2018 Piening BD, Zhou W, Contrepois K, Röst H, Gu Urban GJ, Mishra T, Hanson BM, Bautista EJ, Leopold S, Yeh CY, Spakowicz D, Banerjee I, Chen C, Kukurba K, Perelman D, ... ... Weinstock GM, et al. Integrative Personal Omics Profiles during Periods of Weight Gain and Loss. Cell Systems. PMID 29361466 DOI: 10.1016/J.Cels.2017.12.013  1
2018 Pierce CM, Hong B, Hoehn HJ, Gomez MF, Melas M, McDonnell K, Kim Y, Sodergren E, Weinstock G, Rennert HS, Giordano T, Greenson J, Rennert G, Gruber SB, Schmit SL. Abstract 4746: Microbes in the tumor microenvironment: Bacterial influences on host immunity in colorectal cancer Cancer Research. 78: 4746-4746. DOI: 10.1158/1538-7445.Am2018-4746  0.48
2018 Mohandas S, Soma VL, Ambooken T, Goldman D, Tran D, Weinstock G, Sodergren E, Herold BC. 619. Intestinal Microbiome Changes Associated with Immune Status and Clostridium difficile Colonization in Hospitalized Children Open Forum Infectious Diseases. 5. DOI: 10.1093/Ofid/Ofy210.626  0.48
2017 Rojas LJ, Weinstock GM, De La Cadena E, Diaz L, Rios R, Hanson BM, Brown JS, Vats P, Phillips DS, Nguyen H, Hujer KM, Correa A, Adams MD, Perez F, Sodergren E, et al. An Analysis of the Epidemic of KPC-Producing Klebsiella pneumoniae: Convergence of Two Evolutionary Mechanisms Creates the "Perfect Storm". The Journal of Infectious Diseases. PMID 29029188 DOI: 10.1093/Infdis/Jix524  1
2017 Bartley JM, Zhou X, Kuchel GA, Weinstock GM, Haynes L. Impact of Age, Caloric Restriction, and Influenza Infection on Mouse Gut Microbiome: An Exploratory Study of the Role of Age-Related Microbiome Changes on Influenza Responses. Frontiers in Immunology. 8: 1164. PMID 28979265 DOI: 10.3389/Fimmu.2017.01164  0.32
2017 Kwambana-Adams B, Hanson B, Worwui A, Agbla S, Foster-Nyarko E, Ceesay F, Ebruke C, Egere U, Zhou Y, Ndukum M, Sodergren E, Barer M, Adegbola R, Weinstock G, Antonio M. Rapid replacement by non-vaccine pneumococcal serotypes may mitigate the impact of the pneumococcal conjugate vaccine on nasopharyngeal bacterial ecology. Scientific Reports. 7: 8127. PMID 28811633 DOI: 10.1038/S41598-017-08717-0  0.48
2017 Petersen LM, Bautista EJ, Nguyen H, Hanson BM, Chen L, Lek SH, Sodergren E, Weinstock GM. Community characteristics of the gut microbiomes of competitive cyclists. Microbiome. 5: 98. PMID 28797298 DOI: 10.1186/S40168-017-0320-4  1
2017 Nelson K, Hemarajata P, Sun D, Rubio-Aparicio D, Tsivkovski R, Yang S, Sebra R, Kasarskis A, Nguyen H, Hanson BM, Leopold S, Weinstock G, Lomovskaya O, Humphries RM. Resistance to ceftazidime-avibactam is due to transposition of KPC in a porin-deficient strain of Klebsiella pneumoniae with increased efflux activity. Antimicrobial Agents and Chemotherapy. PMID 28739787 DOI: 10.1128/Aac.00989-17  0.4
2017 Savage JH, Lee-Sarwar KA, Sordillo J, Bunyavanich S, Zhou Y, O'Connor G, Sandel M, Bacharier L, Zeiger R, Sodergren E, Weinstock GM, Gold DR, Weiss ST, Litonjua AA. A prospective microbiome-wide association study of food sensitization and food allergy in early childhood. Allergy. PMID 28632934 DOI: 10.1111/All.13232  0.48
2017 Campbell CMP, Hong B, Gomez MF, Hanson BM, Sodergren E, Sha ST, Russell JS, Weinstock GM. Abstract 2252: Microbial profiling of the head and neck tumor microenvironment as a biomarker of clinical response to chemoradiation Epidemiology. 77: 2252-2252. DOI: 10.1158/1538-7445.Am2017-2252  1
2016 Sordillo JE, Zhou Y, McGeachie MJ, Ziniti J, Lange N, Laranjo N, Savage JR, Carey V, O'Connor G, Sandel M, Strunk R, Bacharier L, Zeiger R, Weiss ST, Weinstock G, et al. Factors Influencing the Infant Gut Microbiome at Age 3-6 months: Findings from the ethnically diverse Vitamin D Antenatal Asthma Reduction Trial (VDAART). The Journal of Allergy and Clinical Immunology. PMID 27746239 DOI: 10.1016/J.Jaci.2016.08.045  0.32
2016 Robinson LS, Perry J, Lek S, Wollam A, Sodergren E, Weinstock G, Lewis WG, Lewis AL. Genome Sequences of 15 Gardnerella vaginalis Strains Isolated from the Vaginas of Women with and without Bacterial Vaginosis. Genome Announcements. 4. PMID 27688326 DOI: 10.1128/Genomea.00879-16  0.48
2016 Rylance J, Kankwatira A, Nelson DE, Toh E, Day RB, Lin H, Gao X, Dong Q, Sodergren E, Weinstock GM, Heyderman RS, Twigg HL, Gordon SB. Household air pollution and the lung microbiome of healthy adults in Malawi: a cross-sectional study. Bmc Microbiology. 16: 182. PMID 27514621 DOI: 10.1186/S12866-016-0803-7  0.48
2016 Senghore M, Bayliss SC, Kwambana-Adams BA, Foster-Nyarko E, Manneh J, Dione M, Badji H, Ebruke C, Doughty EL, Thorpe HA, Jasinska AJ, Schmitt CA, Cramer JD, Turner TR, Weinstock G, et al. Whole-genome sequencing reveals transmission of Staphylococcus aureus from humans to green monkeys in The Gambia. Applied and Environmental Microbiology. PMID 27474712 DOI: 10.1128/Aem.01496-16  0.6
2016 Nakanishi M, Chen Y, Qendro V, Miyamoto S, Weinstock E, Weinstock GM, Rosenberg DW. Effects of walnut consumption on colon carcinogenesis and microbial community structure. Cancer Prevention Research (Philadelphia, Pa.). PMID 27215566 DOI: 10.1158/1940-6207.Capr-16-0026  0.4
2016 Hanson B, Zhou Y, Bautista EJ, Urch B, Speck M, Silverman F, Muilenberg M, Phipatanakul W, Weinstock G, Sodergren E, Gold DR, Sordillo JE. Characterization of the bacterial and fungal microbiome in indoor dust and outdoor air samples: a pilot study. Environmental Science. Processes & Impacts. PMID 27213188 DOI: 10.1039/C5Em00639B  0.6
2016 Hanson BM, Weinstock GM. The importance of the microbiome in epidemiologic research. Annals of Epidemiology. PMID 27180113 DOI: 10.1016/J.Annepidem.2016.03.008  0.6
2016 Muir P, Li S, Lou S, Wang D, Spakowicz DJ, Salichos L, Zhang J, Weinstock GM, Isaacs F, Rozowsky J, Gerstein M. Erratum to: The real cost of sequencing: scaling computation to keep pace with data generation. Genome Biology. 17: 78. PMID 27125642 DOI: 10.1186/S13059-016-0961-9  1
2016 Muir P, Li S, Lou S, Wang D, Spakowicz DJ, Salichos L, Zhang J, Weinstock GM, Isaacs F, Rozowsky J, Gerstein M. The real cost of sequencing: scaling computation to keep pace with data generation. Genome Biology. 17: 53. PMID 27009100 DOI: 10.1186/S13059-016-0917-0  0.6
2016 Warner BB, Deych E, Zhou Y, Hall-Moore C, Weinstock GM, Sodergren E, Shaikh N, Hoffmann JA, Linneman LA, Hamvas A, Khanna G, Rouggly-Nickless LC, Ndao IM, Shands BA, Escobedo M, et al. Gut bacteria dysbiosis and necrotising enterocolitis in very low birthweight infants: a prospective case-control study. Lancet (London, England). PMID 26969089 DOI: 10.1016/S0140-6736(16)00081-7  0.6
2016 Westblade LF, van Belkum A, Grundhoff A, Weinstock GM, Pamer EG, Pallen MJ, Dunne WM. Role of Clinicogenomics in Infectious Disease Diagnostics and Public Health Microbiology. Journal of Clinical Microbiology. PMID 26912755 DOI: 10.1128/Jcm.02664-15  0.6
2016 Didion JP, Morgan AP, Yadgary L, Bell TA, McMullan RC, Ortiz de Solorzano L, Britton-Davidian J, Bult CJ, Campbell KJ, Castiglia R, Ching YH, Chunco AJ, Crowley JJ, Chesler EJ, Förster DW, ... ... Weinstock GM, et al. R2d2 drives selfish sweeps in the house mouse. Molecular Biology and Evolution. PMID 26882987 DOI: 10.1093/Molbev/Msw036  0.6
2016 McGeachie MJ, Sordillo JE, Gibson T, Weinstock GM, Liu YY, Gold DR, Weiss ST, Litonjua A. Longitudinal Prediction of the Infant Gut Microbiome with Dynamic Bayesian Networks. Scientific Reports. 6: 20359. PMID 26853461 DOI: 10.1038/Srep20359  0.6
2016 Twigg Iii HL, Knox KS, Zhou J, Crothers KA, Nelson DE, Toh E, Day RB, Lin H, Gao X, Dong Q, Mi D, Katz BP, Sodergren E, Weinstock GM. Effect of Advanced HIV Infection on the Respiratory Microbiome. American Journal of Respiratory and Critical Care Medicine. PMID 26835554 DOI: 10.1164/Rccm.201509-1875Oc  0.6
2016 Bray MS, Loos RJ, McCaffery JM, Ling C, Franks PW, Weinstock GM, Snyder MP, Vassy JL, Agurs-Collins T. NIH working group report-using genomic information to guide weight management: From universal to precision treatment. Obesity (Silver Spring, Md.). 24: 14-22. PMID 26692578 DOI: 10.1002/Oby.21381  0.6
2016 Weinstock GM. A Glimpse of Microbial Power in Preventive Medicine. Jama Pediatrics. 170: 11. PMID 26551837 DOI: 10.1001/Jamapediatrics.2015.3246  0.6
2016 Daiger SP, Sullivan LS, Bowne SJ, Koboldt DC, Blanton SH, Wheaton DK, Avery CE, Cadena ED, Koenekoop RK, Fulton RS, Wilson RK, Weinstock GM, Lewis RA, Birch DG. Identification of a Novel Gene on 10q22.1 Causing Autosomal Dominant Retinitis Pigmentosa (adRP). Advances in Experimental Medicine and Biology. 854: 193-200. PMID 26427411 DOI: 10.1007/978-3-319-17121-0_26  0.6
2015 Rowley AH, Wylie KM, Kim KY, Pink AJ, Yang A, Reindel R, Baker SC, Shulman ST, Orenstein JM, Lingen MW, Weinstock GM, Wylie TN. The transcriptional profile of coronary arteritis in Kawasaki disease. Bmc Genomics. 16: 1076. PMID 26679344 DOI: 10.1186/S12864-015-2323-5  0.6
2015 Goldberg B, Sichtig H, Geyer C, Ledeboer N, Weinstock GM. Making the Leap from Research Laboratory to Clinic: Challenges and Opportunities for Next-Generation Sequencing in Infectious Disease Diagnostics. Mbio. 6. PMID 26646014 DOI: 10.1128/Mbio.01888-15  0.6
2015 Zhou Y, Wylie K, Ei Feghaly RE, Mihindukulasuriya K, Elward A, Haslam DB, Storch G, Weinstock GM. Metagenomic approach for identification of the pathogens associated with diarrhea in stool specimens. Journal of Clinical Microbiology. PMID 26637379 DOI: 10.1128/Jcm.01965-15  0.6
2015 Wylie KM, Weinstock GM, Storch GA. Emergence of Rotavirus G12P[8] in St. Louis During the 2012-2013 Rotavirus Season. Journal of the Pediatric Infectious Diseases Society. 4: e84-9. PMID 26513823 DOI: 10.1093/Jpids/Piu090  0.44
2015 Davis C, Kota K, Baldhandapani V, Gong W, Abubucker S, Becker E, Martin J, Wylie KM, Khetani R, Hudson ME, Weinstock GM, Mitreva M. mBLAST: Keeping up with the sequencing explosion for (meta)genome analysis. Journal of Data Mining in Genomics & Proteomics. 4. PMID 26500804 DOI: 10.4172/2153-0602.1000135  0.44
2015 Čejková D, Strouhal M, Norris SJ, Weinstock GM, Šmajs D. A Retrospective Study on Genetic Heterogeneity within Treponema Strains: Subpopulations Are Genetically Distinct in a Limited Number of Positions. Plos Neglected Tropical Diseases. 9: e0004110. PMID 26436423 DOI: 10.1371/Journal.Pntd.0004110  0.48
2015 Panesso D, Planet PJ, Diaz L, Hugonnet JE, Tran TT, Narechania A, Munita JM, Rincon S, Carvajal LP, Reyes J, Londoño A, Smith H, Sebra R, Deikus G, Weinstock GM, et al. Methicillin-Susceptible, Vancomycin-Resistant Staphylococcus aureus, Brazil. Emerging Infectious Diseases. 21: 1844-8. PMID 26402569 DOI: 10.3201/Eid2110.141914  0.6
2015 Warren WC, Jasinska AJ, Garcia-Perez R, Svardal H, Tomlinson C, Rocchi M, Archidiacono N, Capozzi O, Minx P, Montague MJ, Kyung K, Hillier LW, Kremitzki M, Graves T, Chiang C, ... ... Weinstock GM, et al. The genome of the vervet (Chlorocebus aethiops sabaeus). Genome Research. PMID 26377836 DOI: 10.1101/Gr.192922.115  0.6
2015 Rodriguez M, Hogan PG, Satola SW, Crispell E, Wylie T, Gao H, Sodergren E, Weinstock GM, Burnham CA, Fritz SA. Discriminatory Indices of Typing Methods for Epidemiologic Analysis of Contemporary Staphylococcus aureus Strains. Medicine. 94: e1534. PMID 26376402 DOI: 10.1097/Md.0000000000001534  0.6
2015 Beck JM, Schloss PD, Venkataraman A, Twigg H, Jablonski KA, Bushman FD, Campbell TB, Charlson ES, Collman RG, Crothers K, Curtis JL, Drews KL, Flores SC, Fontenot AP, Foulkes MA, ... ... Weinstock GM, et al. Multicenter Comparison of Lung and Oral Microbiomes of HIV-infected and HIV-uninfected Individuals. American Journal of Respiratory and Critical Care Medicine. 192: 1335-44. PMID 26247840 DOI: 10.1164/Rccm.201501-0128Oc  0.6
2015 Zhang Y, Rowehl L, Krumsiek JM, Orner EP, Shaikh N, Tarr PI, Sodergren E, Weinstock GM, Boedeker EC, Xiong X, Parkinson J, Frank DN, Li E, Gathungu G. Correction: Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis. Plos One. 10: e0134759. PMID 26218289 DOI: 10.1371/journal.pone.0134759  0.48
2015 Zhang Y, Rowehl L, Krumsiek JM, Orner EP, Shaikh N, Tarr PI, Sodergren E, Weinstock GM, Boedeker EC, Xiong X, Parkinson J, Frank DN, Li E, Gathungu G. Identification of Candidate Adherent-Invasive E. coli Signature Transcripts by Genomic/Transcriptomic Analysis. Plos One. 10: e0130902. PMID 26125937 DOI: 10.1371/Journal.Pone.0130902  0.48
2015 Nobel YR, Cox LM, Kirigin FF, Bokulich NA, Yamanishi S, Teitler I, Chung J, Sohn J, Barber CM, Goldfarb DS, Raju K, Abubucker S, Zhou Y, Ruiz VE, Li H, ... ... Weinstock GM, et al. Metabolic and metagenomic outcomes from early-life pulsed antibiotic treatment. Nature Communications. 6: 7486. PMID 26123276 DOI: 10.1038/Ncomms8486  0.6
2015 Huang YS, Ramensky V, Service SK, Jasinska AJ, Jung Y, Choi OW, Cantor RM, Juretic N, Wasserscheid J, Kaplan JR, Jorgensen MJ, Dyer TD, Dewar K, Blangero J, Wilson RK, ... ... Weinstock GM, et al. Sequencing strategies and characterization of 721 vervet monkey genomes for future genetic analyses of medically relevant traits. Bmc Biology. 13: 41. PMID 26092298 DOI: 10.1186/S12915-015-0152-2  0.6
2015 Planet PJ, Diaz L, Kolokotronis SO, Narechania A, Reyes J, Xing G, Rincon S, Smith H, Panesso D, Ryan C, Smith DP, Guzman M, Zurita J, Sebra R, Deikus G, ... ... Weinstock GM, et al. Parallel Epidemics of Community-Associated Methicillin-Resistant Staphylococcus aureus USA300 Infection in North and South America. The Journal of Infectious Diseases. PMID 26048971 DOI: 10.1093/Infdis/Jiv320  0.6
2015 Yerrapragada S, Shukla A, Hallsworth-Pepin K, Choi K, Wollam A, Clifton S, Qin X, Muzny D, Raghuraman S, Ashki H, Uzman A, Highlander SK, Fryszczyn BG, Fox GE, Tirumalai MR, ... ... Weinstock GM, et al. Extreme Sensory Complexity Encoded in the 10-Megabase Draft Genome Sequence of the Chromatically Acclimating Cyanobacterium Tolypothrix sp. PCC 7601. Genome Announcements. 3. PMID 25953173 DOI: 10.1128/Genomea.00355-15  0.6
2015 Zhou Y, Shan G, Sodergren E, Weinstock G, Walker WA, Gregory KE. Longitudinal analysis of the premature infant intestinal microbiome prior to necrotizing enterocolitis: a case-control study. Plos One. 10: e0118632. PMID 25741698 DOI: 10.1371/Journal.Pone.0118632  0.6
2015 Leslie EJ, Taub MA, Liu H, Steinberg KM, Koboldt DC, Zhang Q, Carlson JC, Hetmanski JB, Wang H, Larson DE, Fulton RS, Kousa YA, Fakhouri WD, Naji A, Ruczinski I, ... ... Weinstock GM, et al. Identification of functional variants for cleft lip with or without cleft palate in or near PAX7, FGFR2, and NOG by targeted sequencing of GWAS loci. American Journal of Human Genetics. 96: 397-411. PMID 25704602 DOI: 10.1016/J.Ajhg.2015.01.004  0.6
2015 Shi B, Chang M, Martin J, Mitreva M, Lux R, Klokkevold P, Sodergren E, Weinstock GM, Haake SK, Li H. Dynamic changes in the subgingival microbiome and their potential for diagnosis and prognosis of periodontitis. Mbio. 6: e01926-14. PMID 25691586 DOI: 10.1128/Mbio.01926-14  0.6
2015 Didion JP, Morgan AP, Clayshulte AM, Mcmullan RC, Yadgary L, Petkov PM, Bell TA, Gatti DM, Crowley JJ, Hua K, Aylor DL, Bai L, Calaway M, Chesler EJ, French JE, ... ... Weinstock GM, et al. A multi-megabase copy number gain causes maternal transmission ratio distortion on mouse chromosome 2. Plos Genetics. 11: e1004850. PMID 25679959 DOI: 10.1371/Journal.Pgen.1004850  0.6
2015 Zhang Q, Abel H, Wells A, Lenzini P, Gomez F, Province MA, Templeton AA, Weinstock GM, Salzman NH, Borecki IB. Selection of models for the analysis of risk-factor trees: leveraging biological knowledge to mine large sets of risk factors with application to microbiome data. Bioinformatics (Oxford, England). 31: 1607-13. PMID 25568281 DOI: 10.1093/Bioinformatics/Btu855  0.6
2015 Sommovilla J, Zhou Y, Sun RC, Choi PM, Diaz-Miron J, Shaikh N, Sodergren E, Warner BB, Weinstock GM, Tarr PI, Warner BW. Small bowel resection induces long-term changes in the enteric microbiota of mice. Journal of Gastrointestinal Surgery : Official Journal of the Society For Surgery of the Alimentary Tract. 19: 56-64; discussion 64. PMID 25183407 DOI: 10.1007/S11605-014-2631-0  0.6
2015 Zhang Y, Rowehl L, Krumsiek JM, Orner EP, Shaikh N, Tarr PI, Sodergren E, Weinstock GM, Boedeker EC, Xiong X, Parkinson J, Frank DN, Li E, Gathungu G. Selected common up-regulated and down-regulated biological pathways in LF82 at 2h and 24h time points. Plos One. DOI: 10.1371/Journal.Pone.0130902.T003  0.48
2014 Peacock SJ, Weinstock GM. Microbial sequencing to improve individual and population health. Genome Medicine. 6: 103. PMID 25505493 DOI: 10.1186/S13073-014-0103-5  0.6
2014 Zhou Y, Holland MJ, Makalo P, Joof H, Roberts CH, Mabey DC, Bailey RL, Burton MJ, Weinstock GM, Burr SE. The conjunctival microbiome in health and trachomatous disease: a case control study. Genome Medicine. 6: 99. PMID 25484919 DOI: 10.1186/S13073-014-0099-X  0.6
2014 Dorsett Y, Zhou Y, Tubbs AT, Chen BR, Purman C, Lee BS, George R, Bredemeyer AL, Zhao JY, Sodergen E, Weinstock GM, Han ND, Reyes A, Oltz EM, Dorsett D, et al. HCoDES reveals chromosomal DNA end structures with single-nucleotide resolution. Molecular Cell. 56: 808-18. PMID 25435138 DOI: 10.1016/J.Molcel.2014.10.024  0.6
2014 Weinstock GM, Peacock SJ. Next-generation pathogen genomics. Genome Biology. 15: 528. PMID 25417942 DOI: 10.1186/S13059-014-0528-6  0.6
2014 Liu Y, Wu B, Weinstock G, Walker DH, Yu XJ. Inactivation of SAM-methyltransferase is the mechanism of attenuation of a historic louse borne typhus vaccine strain. Plos One. 9: e113285. PMID 25412248 DOI: 10.1371/Journal.Pone.0113285  0.32
2014 Staudová B, Strouhal M, Zobaníková M, Cejková D, Fulton LL, Chen L, Giacani L, Centurion-Lara A, Bruisten SM, Sodergren E, Weinstock GM, Smajs D. Whole genome sequence of the Treponema pallidum subsp. endemicum strain Bosnia A: the genome is related to yaws treponemes but contains few loci similar to syphilis treponemes. Plos Neglected Tropical Diseases. 8: e3261. PMID 25375929 DOI: 10.1371/Journal.Pntd.0003261  1
2014 Smallwood TL, Gatti DM, Quizon P, Weinstock GM, Jung KC, Zhao L, Hua K, Pomp D, Bennett BJ. High-resolution genetic mapping in the diversity outbred mouse population identifies Apobec1 as a candidate gene for atherosclerosis. G3 (Bethesda, Md.). 4: 2353-63. PMID 25344410 DOI: 10.1534/G3.114.014704  0.6
2014 Zhou Y, Burnham CA, Hink T, Chen L, Shaikh N, Wollam A, Sodergren E, Weinstock GM, Tarr PI, Dubberke ER. Phenotypic and genotypic analysis of Clostridium difficile isolates: a single-center study. Journal of Clinical Microbiology. 52: 4260-6. PMID 25275005 DOI: 10.1128/Jcm.02115-14  0.6
2014 Wylie KM, Mihindukulasuriya KA, Zhou Y, Sodergren E, Storch GA, Weinstock GM. Metagenomic analysis of double-stranded DNA viruses in healthy adults. Bmc Biology. 12: 71. PMID 25212266 DOI: 10.1186/S12915-014-0071-7  0.6
2014 Sullivan LS, Koboldt DC, Bowne SJ, Lang S, Blanton SH, Cadena E, Avery CE, Lewis RA, Webb-Jones K, Wheaton DH, Birch DG, Coussa R, Ren H, Lopez I, Chakarova C, ... ... Weinstock GM, et al. A dominant mutation in hexokinase 1 (HK1) causes retinitis pigmentosa. Investigative Ophthalmology & Visual Science. 55: 7147-58. PMID 25190649 DOI: 10.1167/Iovs.14-15419  0.6
2014 Deng X, Desai PT, den Bakker HC, Mikoleit M, Tolar B, Trees E, Hendriksen RS, Frye JG, Porwollik S, Weimer BC, Wiedmann M, Weinstock GM, Fields PI, McClelland M. Genomic epidemiology of Salmonella enterica serotype Enteritidis based on population structure of prevalent lineages. Emerging Infectious Diseases. 20: 1481-9. PMID 25147968 DOI: 10.3201/Eid2009.131095  0.6
2014 La Rosa PS, Warner BB, Zhou Y, Weinstock GM, Sodergren E, Hall-Moore CM, Stevens HJ, Bennett WE, Shaikh N, Linneman LA, Hoffmann JA, Hamvas A, Deych E, Shands BA, Shannon WD, et al. Patterned progression of bacterial populations in the premature infant gut Proceedings of the National Academy of Sciences of the United States of America. 111: 12522-12527. PMID 25114261 DOI: 10.1073/Pnas.1409497111  0.6
2014 Kyrpides NC, Hugenholtz P, Eisen JA, Woyke T, Göker M, Parker CT, Amann R, Beck BJ, Chain PS, Chun J, Colwell RR, Danchin A, Dawyndt P, Dedeurwaerdere T, DeLong EF, ... ... Weinstock G, et al. Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains. Plos Biology. 12: e1001920. PMID 25093819 DOI: 10.1371/Journal.Pbio.1001920  0.6
2014 . The common marmoset genome provides insight into primate biology and evolution. Nature Genetics. 46: 850-7. PMID 25038751 DOI: 10.1038/Ng.3042  0.6
2014 Johnson MD, Bell J, Clarke K, Chandler R, Pathak P, Xia Y, Marshall RL, Weinstock GM, Loman NJ, Winn PJ, Lund PA. Characterization of mutations in the PAS domain of the EvgS sensor kinase selected by laboratory evolution for acid resistance in Escherichia coli. Molecular Microbiology. 93: 911-27. PMID 24995530 DOI: 10.1111/Mmi.12704  0.6
2014 Wang W, Zhang X, Xu Y, Weinstock GM, Di Bisceglie AM, Fan X. High-resolution quantification of hepatitis C virus genome-wide mutation load and its correlation with the outcome of peginterferon-alpha2a and ribavirin combination therapy. Plos One. 9: e100131. PMID 24950220 DOI: 10.1371/Journal.Pone.0100131  0.6
2014 Somarajan SR, Roh JH, Singh KV, Weinstock GM, Murray BE. CcpA is important for growth and virulence of Enterococcus faecium. Infection and Immunity. 82: 3580-7. PMID 24914215 DOI: 10.1128/Iai.01911-14  0.6
2014 Zhou Y, Mihindukulasuriya KA, Gao H, La Rosa PS, Wylie KM, Martin JC, Kota K, Shannon WD, Mitreva M, Sodergren E, Weinstock GM. Exploration of bacterial community classes in major human habitats. Genome Biology. 15: R66. PMID 24887286 DOI: 10.1186/Gb-2014-15-5-R66  0.48
2014 Diaz L, Tran TT, Munita JM, Miller WR, Rincon S, Carvajal LP, Wollam A, Reyes J, Panesso D, Rojas NL, Shamoo Y, Murray BE, Weinstock GM, Arias CA. Whole-genome analyses of Enterococcus faecium isolates with diverse daptomycin MICs. Antimicrobial Agents and Chemotherapy. 58: 4527-34. PMID 24867964 DOI: 10.1128/Aac.02686-14  0.6
2014 Rossi F, Diaz L, Wollam A, Panesso D, Zhou Y, Rincon S, Narechania A, Xing G, Di Gioia TS, Doi A, Tran TT, Reyes J, Munita JM, Carvajal LP, Hernandez-Roldan A, ... ... Weinstock GM, et al. Transferable vancomycin resistance in a community-associated MRSA lineage. The New England Journal of Medicine. 370: 1524-31. PMID 24738669 DOI: 10.1056/Nejmoa1303359  0.6
2014 Daiger SP, Bowne SJ, Sullivan LS, Blanton SH, Weinstock GM, Koboldt DC, Fulton RS, Larsen D, Humphries P, Humphries MM, Pierce EA, Chen R, Li Y. Application of next-generation sequencing to identify genes and mutations causing autosomal dominant retinitis pigmentosa (adRP). Advances in Experimental Medicine and Biology. 801: 123-9. PMID 24664689 DOI: 10.1007/978-1-4614-3209-8_16  0.6
2014 Carl MA, Ndao IM, Springman AC, Manning SD, Johnson JR, Johnston BD, Burnham CA, Weinstock ES, Weinstock GM, Wylie TN, Mitreva M, Abubucker S, Zhou Y, Stevens HJ, Hall-Moore C, et al. Sepsis from the gut: the enteric habitat of bacteria that cause late-onset neonatal bloodstream infections. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. 58: 1211-8. PMID 24647013 DOI: 10.1093/Cid/Ciu084  0.6
2014 Richards VP, Palmer SR, Pavinski Bitar PD, Qin X, Weinstock GM, Highlander SK, Town CD, Burne RA, Stanhope MJ. Phylogenomics and the dynamic genome evolution of the genus Streptococcus. Genome Biology and Evolution. 6: 741-53. PMID 24625962 DOI: 10.1093/Gbe/Evu048  0.6
2014 Koboldt DC, Larson DE, Sullivan LS, Bowne SJ, Steinberg KM, Churchill JD, Buhr AC, Nutter N, Pierce EA, Blanton SH, Weinstock GM, Wilson RK, Daiger SP. Exome-based mapping and variant prioritization for inherited Mendelian disorders. American Journal of Human Genetics. 94: 373-84. PMID 24560519 DOI: 10.1016/J.Ajhg.2014.01.016  0.6
2014 Beigelman A, Weinstock GM, Bacharier LB. The relationships between environmental bacterial exposure, airway bacterial colonization, and asthma. Current Opinion in Allergy and Clinical Immunology. 14: 137-42. PMID 24451910 DOI: 10.1097/Aci.0000000000000036  0.6
2014 Angus AA, Agapakis CM, Fong S, Yerrapragada S, Estrada-de los Santos P, Yang P, Song N, Kano S, Caballero-Mellado J, de Faria SM, Dakora FD, Weinstock G, Hirsch AM. Plant-associated symbiotic Burkholderia species lack hallmark strategies required in mammalian pathogenesis. Plos One. 9: e83779. PMID 24416172 DOI: 10.1371/Journal.Pone.0083779  0.6
2014 Chen K, Chen L, Fan X, Wallis J, Ding L, Weinstock G. TIGRA: a targeted iterative graph routing assembler for breakpoint assembly. Genome Research. 24: 310-7. PMID 24307552 DOI: 10.1101/Gr.162883.113  0.6
2014 Rosa PSL, Warner BB, Zhou Y, Weinstock GM, Sodergren E, Hall-Moore CM, Stevens HJ, Bennett WE, Shaikh N, Linneman LA, Hoffmann JA, Hamvas A, Deych E, Shands BA, Shannon WD, et al. Erratum: Patterned progression of bacterial populations in the premature infant gut (Proceedings of the National Academy of Sciences of the United States of America (2014) 111 (12522-12527) DOI: 10.1073/pnas.1409497111) Proceedings of the National Academy of Sciences of the United States of America. 111. DOI: 10.1073/Pnas.1420817111  0.48
2013 Twigg HL, Morris A, Ghedin E, Curtis JL, Huffnagle GB, Crothers K, Campbell TB, Flores SC, Fontenot AP, Beck JM, Huang L, Lynch S, Knox KS, Weinstock G. Use of bronchoalveolar lavage to assess the respiratory microbiome: signal in the noise. The Lancet. Respiratory Medicine. 1: 354-6. PMID 24429191 DOI: 10.1016/S2213-2600(13)70117-6  0.6
2013 Jasinska AJ, Schmitt CA, Service SK, Cantor RM, Dewar K, Jentsch JD, Kaplan JR, Turner TR, Warren WC, Weinstock GM, Woods RP, Freimer NB. Systems biology of the vervet monkey. Ilar Journal / National Research Council, Institute of Laboratory Animal Resources. 54: 122-43. PMID 24174437 DOI: 10.1093/Ilar/Ilt049  0.6
2013 Pětrošová H, Pospíšilová P, Strouhal M, Čejková D, Zobaníková M, Mikalová L, Sodergren E, Weinstock GM, Šmajs D. Resequencing of Treponema pallidum ssp. pallidum strains Nichols and SS14: correction of sequencing errors resulted in increased separation of syphilis treponeme subclusters. Plos One. 8: e74319. PMID 24058545 DOI: 10.1371/Journal.Pone.0074319  0.6
2013 Kelly SA, Bell TA, Selitsky SR, Buus RJ, Hua K, Weinstock GM, Garland T, Pardo-Manuel de Villena F, Pomp D. A novel intronic single nucleotide polymorphism in the myosin heavy polypeptide 4 gene is responsible for the mini-muscle phenotype characterized by major reduction in hind-limb muscle mass in mice. Genetics. 195: 1385-95. PMID 24056412 DOI: 10.1534/Genetics.113.154476  0.6
2013 Turabelidze G, Lawrence SJ, Gao H, Sodergren E, Weinstock GM, Abubucker S, Wylie T, Mitreva M, Shaikh N, Gautom R, Tarr PI. Precise dissection of an Escherichia coli O157:H7 outbreak by single nucleotide polymorphism analysis. Journal of Clinical Microbiology. 51: 3950-4. PMID 24048526 DOI: 10.1128/Jcm.01930-13  0.6
2013 Tran TT, Panesso D, Mishra NN, Mileykovskaya E, Guan Z, Munita JM, Reyes J, Diaz L, Weinstock GM, Murray BE, Shamoo Y, Dowhan W, Bayer AS, Arias CA. Daptomycin-resistant Enterococcus faecalis diverts the antibiotic molecule from the division septum and remodels cell membrane phospholipids. Mbio. 4. PMID 23882013 DOI: 10.1128/Mbio.00281-13  0.6
2013 Lang GI, Rice DP, Hickman MJ, Sodergren E, Weinstock GM, Botstein D, Desai MM. Pervasive genetic hitchhiking and clonal interference in forty evolving yeast populations. Nature. 500: 571-4. PMID 23873039 DOI: 10.1038/Nature12344  0.6
2013 Tirumalai MR, Rastogi R, Zamani N, O'Bryant Williams E, Allen S, Diouf F, Kwende S, Weinstock GM, Venkateswaran KJ, Fox GE. Candidate genes that may be responsible for the unusual resistances exhibited by Bacillus pumilus SAFR-032 spores. Plos One. 8: e66012. PMID 23799069 DOI: 10.1371/Journal.Pone.0066012  0.6
2013 Wylie KM, Weinstock GM, Storch GA. Virome genomics: a tool for defining the human virome. Current Opinion in Microbiology. 16: 479-84. PMID 23706900 DOI: 10.1016/J.Mib.2013.04.006  0.6
2013 Doolittle WF, Fraser P, Gerstein MB, Graveley BR, Henikoff S, Huttenhower C, Oshlack A, Ponting CP, Rinn JL, Schatz MC, Ule J, Weigel D, Weinstock GM. Sixty years of genome biology. Genome Biology. 14: 113. PMID 23651518 DOI: 10.1186/Gb-2013-14-4-113  0.6
2013 Zobaníková M, Strouhal M, Mikalová L, Cejková D, Ambrožová L, Pospíšilová P, Fulton LL, Chen L, Sodergren E, Weinstock GM, Smajs D. Whole genome sequence of the Treponema Fribourg-Blanc: unspecified simian isolate is highly similar to the yaws subspecies. Plos Neglected Tropical Diseases. 7: e2172. PMID 23638193 DOI: 10.1371/Journal.Pntd.0002172  0.6
2013 Tomida S, Nguyen L, Chiu BH, Liu J, Sodergren E, Weinstock GM, Li H. Pan-genome and comparative genome analyses of propionibacterium acnes reveal its genomic diversity in the healthy and diseased human skin microbiome. Mbio. 4: e00003-13. PMID 23631911 DOI: 10.1128/Mbio.00003-13  0.6
2013 Aylward FO, Burnum-Johnson KE, Tringe SG, Teiling C, Tremmel DM, Moeller JA, Scott JJ, Barry KW, Piehowski PD, Nicora CD, Malfatti SA, Monroe ME, Purvine SO, Goodwin LA, Smith RD, ... Weinstock GM, et al. Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens. Applied and Environmental Microbiology. 79: 3770-8. PMID 23584789 DOI: 10.1128/Aem.03833-12  0.6
2013 Morris A, Beck JM, Schloss PD, Campbell TB, Crothers K, Curtis JL, Flores SC, Fontenot AP, Ghedin E, Huang L, Jablonski K, Kleerup E, Lynch SV, Sodergren E, Twigg H, ... ... Weinstock GM, et al. Comparison of the respiratory microbiome in healthy nonsmokers and smokers. American Journal of Respiratory and Critical Care Medicine. 187: 1067-75. PMID 23491408 DOI: 10.1164/Rccm.201210-1913Oc  0.6
2013 Desai PT, Porwollik S, Long F, Cheng P, Wollam A, Bhonagiri-Palsikar V, Hallsworth-Pepin K, Clifton SW, Weinstock GM, McClelland M. Evolutionary Genomics of Salmonella enterica Subspecies. Mbio. 4. PMID 23462113 DOI: 10.1128/Mbio.00579-12  0.6
2013 Lozupone C, Cota-Gomez A, Palmer BE, Linderman DJ, Charlson ES, Sodergren E, Mitreva M, Abubucker S, Martin J, Yao G, Campbell TB, Flores SC, Ackerman G, Stombaugh J, Ursell L, ... ... Weinstock GM, et al. Widespread colonization of the lung by Tropheryma whipplei in HIV infection. American Journal of Respiratory and Critical Care Medicine. 187: 1110-7. PMID 23392441 DOI: 10.1164/Rccm.201211-2145Oc  0.6
2013 Fitz-Gibbon S, Tomida S, Chiu BH, Nguyen L, Du C, Liu M, Elashoff D, Erfe MC, Loncaric A, Kim J, Modlin RL, Miller JF, Sodergren E, Craft N, Weinstock GM, et al. Propionibacterium acnes strain populations in the human skin microbiome associated with acne. The Journal of Investigative Dermatology. 133: 2152-60. PMID 23337890 DOI: 10.1038/Jid.2013.21  0.6
2013 Zhou Y, Gao H, Mihindukulasuriya KA, La Rosa PS, Wylie KM, Vishnivetskaya T, Podar M, Warner B, Tarr PI, Nelson DE, Fortenberry JD, Holland MJ, Burr SE, Shannon WD, Sodergren E, ... Weinstock GM, et al. Biogeography of the ecosystems of the healthy human body. Genome Biology. 14: R1. PMID 23316946 DOI: 10.1186/Gb-2013-14-1-R1  0.6
2013 Redel H, Gao Z, Li H, Alekseyenko AV, Zhou Y, Perez-Perez GI, Weinstock G, Sodergren E, Blaser MJ. Quantitation and composition of cutaneous microbiota in diabetic and nondiabetic men. The Journal of Infectious Diseases. 207: 1105-14. PMID 23300163 DOI: 10.1093/Infdis/Jit005  0.6
2013 Schloissnig S, Arumugam M, Sunagawa S, Mitreva M, Tap J, Zhu A, Waller A, Mende DR, Kultima JR, Martin J, Kota K, Sunyaev SR, Weinstock GM, Bork P. Genomic variation landscape of the human gut microbiome. Nature. 493: 45-50. PMID 23222524 DOI: 10.1038/Nature11711  0.6
2013 Tran TT, Panesso D, Gao H, Roh JH, Munita JM, Reyes J, Diaz L, Lobos EA, Shamoo Y, Mishra NN, Bayer AS, Murray BE, Weinstock GM, Arias CA. Whole-genome analysis of a daptomycin-susceptible enterococcus faecium strain and its daptomycin-resistant variant arising during therapy. Antimicrobial Agents and Chemotherapy. 57: 261-8. PMID 23114757 DOI: 10.1128/Aac.01454-12  0.6
2013 Cejková D, Zobaníková M, Pospísilová P, Strouhal M, Mikalová L, Weinstock GM, Smajs D. Structure of rrn operons in pathogenic non-cultivable treponemes: sequence but not genomic position of intergenic spacers correlates with classification of Treponema pallidum and Treponema paraluiscuniculi strains. Journal of Medical Microbiology. 62: 196-207. PMID 23082031 DOI: 10.1099/Jmm.0.050658-0  0.6
2013 Wendl MC, Kota K, Weinstock GM, Mitreva M. Coverage theories for metagenomic DNA sequencing based on a generalization of Stevens' theorem. Journal of Mathematical Biology. 67: 1141-61. PMID 22965653 DOI: 10.1007/S00285-012-0586-X  0.6
2013 Angus AA, Lee A, Lum MR, Shehayeb M, Hessabi R, Fujishige NA, Yerrapragada S, Kano S, Song N, Yang P, Estrada de los Santos P, de Faria SM, Dakora FD, Weinstock G, Hirsch AM. Nodulation and effective nitrogen fixation of Macroptilium atropurpureum (siratro) by Burkholderia tuberum, a nodulating and plant growth promoting beta-proteobacterium, are influenced by environmental factors Plant and Soil. 369: 543-562. DOI: 10.1007/S11104-013-1590-7  0.6
2012 Zobaníková M, Mikolka P, Cejková D, Pospíšilová P, Chen L, Strouhal M, Qin X, Weinstock GM, Smajs D. Complete genome sequence of Treponema pallidum strain DAL-1. Standards in Genomic Sciences. 7: 12-21. PMID 23449808 DOI: 10.4056/Sigs.2615838  0.6
2012 La Rosa PS, Brooks JP, Deych E, Boone EL, Edwards DJ, Wang Q, Sodergren E, Weinstock G, Shannon WD. Hypothesis testing and power calculations for taxonomic-based human microbiome data. Plos One. 7: e52078. PMID 23284876 DOI: 10.1371/Journal.Pone.0052078  0.6
2012 McElvania TeKippe E, Wylie KM, Deych E, Sodergren E, Weinstock G, Storch GA. Increased prevalence of anellovirus in pediatric patients with fever. Plos One. 7: e50937. PMID 23226428 DOI: 10.1371/Journal.Pone.0050937  0.6
2012 Kontur WS, Schackwitz WS, Ivanova N, Martin J, Labutti K, Deshpande S, Tice HN, Pennacchio C, Sodergren E, Weinstock GM, Noguera DR, Donohue TJ. Revised sequence and annotation of the Rhodobacter sphaeroides 2.4.1 genome. Journal of Bacteriology. 194: 7016-7. PMID 23209255 DOI: 10.1128/Jb.01214-12  0.6
2012 La Rosa PS, Shands B, Deych E, Zhou Y, Sodergren E, Weinstock G, Shannon WD. Statistical object data analysis of taxonomic trees from human microbiome data. Plos One. 7: e48996. PMID 23152838 DOI: 10.1371/Journal.Pone.0048996  0.48
2012 Colvin JM, Muenzer JT, Jaffe DM, Smason A, Deych E, Shannon WD, Arens MQ, Buller RS, Lee WM, Weinstock EJ, Weinstock GM, Storch GA. Detection of viruses in young children with fever without an apparent source. Pediatrics. 130: e1455-62. PMID 23129086 DOI: 10.1542/Peds.2012-1391  0.6
2012 Williams TM, Loman NJ, Ebruke C, Musher DM, Adegbola RA, Pallen MJ, Weinstock GM, Antonio M. Genome analysis of a highly virulent serotype 1 strain of Streptococcus pneumoniae from West Africa. Plos One. 7: e26742. PMID 23082106 DOI: 10.1371/Journal.Pone.0026742  0.6
2012 Pětrošová H, Zobaníková M, Čejková D, Mikalová L, Pospíšilová P, Strouhal M, Chen L, Qin X, Muzny DM, Weinstock GM, Šmajs D. Whole genome sequence of Treponema pallidum ssp. pallidum, strain Mexico A, suggests recombination between yaws and syphilis strains. Plos Neglected Tropical Diseases. 6: e1832. PMID 23029591 DOI: 10.1371/Journal.Pntd.0001832  0.6
2012 McWilliams BD, Palzkill T, Weinstock GM, Petrosino JF. Identification of novel and cross-species seroreactive proteins from Bacillus anthracis using a ligation-independent cloning-based, SOS-inducible expression system. Microbial Pathogenesis. 53: 250-8. PMID 22975444 DOI: 10.1016/J.Micpath.2012.08.006  0.6
2012 Weinstock GM. Genomic approaches to studying the human microbiota. Nature. 489: 250-6. PMID 22972298 DOI: 10.1038/Nature11553  0.6
2012 Qin X, Galloway-Peña JR, Sillanpaa J, Roh JH, Nallapareddy SR, Chowdhury S, Bourgogne A, Choudhury T, Muzny DM, Buhay CJ, Ding Y, Dugan-Rocha S, Liu W, Kovar C, Sodergren E, ... ... Weinstock GM, et al. Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes. Bmc Microbiology. 12: 135. PMID 22769602 DOI: 10.1186/1471-2180-12-135  0.6
2012 Ward DV, Gevers D, Giannoukos G, Earl AM, Methé BA, Sodergren E, Feldgarden M, Ciulla DM, Tabbaa D, Arze C, Appelbaum E, Aird L, Anderson S, Ayvaz T, Belter E, ... ... Weinstock G, et al. Evaluation of 16s rDNA-based community profiling for human microbiome research Plos One. 7. PMID 22720093 DOI: 10.1371/Journal.Pone.0039315  0.6
2012 Martin J, Sykes S, Young S, Kota K, Sanka R, Sheth N, Orvis J, Sodergren E, Wang Z, Weinstock GM, Mitreva M. Optimizing read mapping to reference genomes to determine composition and species prevalence in microbial communities. Plos One. 7: e36427. PMID 22719831 DOI: 10.1371/Journal.Pone.0036427  0.6
2012 Wylie KM, Truty RM, Sharpton TJ, Mihindukulasuriya KA, Zhou Y, Gao H, Sodergren E, Weinstock GM, Pollard KS. Novel bacterial taxa in the human microbiome. Plos One. 7: e35294. PMID 22719826 DOI: 10.1371/Journal.Pone.0035294  0.6
2012 Zhang T, DeSimone RA, Jiao X, Rohlf FJ, Zhu W, Gong QQ, Hunt SR, Dassopoulos T, Newberry RD, Sodergren E, Weinstock G, Robertson CE, Frank DN, Li E. Host genes related to paneth cells and xenobiotic metabolism are associated with shifts in human ileum-associated microbial composition. Plos One. 7: e30044. PMID 22719822 DOI: 10.1371/Journal.Pone.0030044  0.6
2012 Wylie KM, Mihindukulasuriya KA, Sodergren E, Weinstock GM, Storch GA. Sequence analysis of the human virome in febrile and afebrile children. Plos One. 7: e27735. PMID 22719819 DOI: 10.1371/Journal.Pone.0027735  0.6
2012 Li E, Hamm CM, Gulati AS, Sartor RB, Chen H, Wu X, Zhang T, Rohlf FJ, Zhu W, Gu C, Robertson CE, Pace NR, Boedeker EC, Harpaz N, Yuan J, ... Weinstock GM, et al. Inflammatory bowel diseases phenotype, C. difficile and NOD2 genotype are associated with shifts in human ileum associated microbial composition. Plos One. 7: e26284. PMID 22719818 DOI: 10.1371/Journal.Pone.0026284  0.6
2012 Wylie KM, Weinstock GM, Storch GA. Emerging view of the human virome. Translational Research : the Journal of Laboratory and Clinical Medicine. 160: 283-90. PMID 22683423 DOI: 10.1016/J.Trsl.2012.03.006  0.6
2012 Nelson DE, Dong Q, Van der Pol B, Toh E, Fan B, Katz BP, Mi D, Rong R, Weinstock GM, Sodergren E, Fortenberry JD. Bacterial communities of the coronal sulcus and distal urethra of adolescent males. Plos One. 7: e36298. PMID 22606251 DOI: 10.1371/Journal.Pone.0036298  0.6
2012 Jasinska AJ, Lin MK, Service S, Choi OW, DeYoung J, Grujic O, Kong SY, Jung Y, Jorgensen MJ, Fairbanks LA, Turner T, Cantor RM, Wasserscheid J, Dewar K, Warren W, ... ... Weinstock G, et al. A non-human primate system for large-scale genetic studies of complex traits. Human Molecular Genetics. 21: 3307-16. PMID 22556363 DOI: 10.1093/Hmg/Dds160  0.6
2012 Cejková D, Zobaníková M, Chen L, Pospíšilová P, Strouhal M, Qin X, Mikalová L, Norris SJ, Muzny DM, Gibbs RA, Fulton LL, Sodergren E, Weinstock GM, Smajs D. Whole genome sequences of three Treponema pallidum ssp. pertenue strains: yaws and syphilis treponemes differ in less than 0.2% of the genome sequence. Plos Neglected Tropical Diseases. 6: e1471. PMID 22292095 DOI: 10.1371/Journal.Pntd.0001471  0.6
2012 Smajs D, Norris SJ, Weinstock GM. Genetic diversity in Treponema pallidum: implications for pathogenesis, evolution and molecular diagnostics of syphilis and yaws. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. 12: 191-202. PMID 22198325 DOI: 10.1016/J.Meegid.2011.12.001  0.6
2012 Yao G, Ye L, Gao H, Minx P, Warren WC, Weinstock GM. Graph accordance of next-generation sequence assemblies. Bioinformatics (Oxford, England). 28: 13-6. PMID 22025481 DOI: 10.1093/Bioinformatics/Btr588  0.6
2012 Monier A, Welsh RM, Gentemann C, Weinstock G, Sodergren E, Armbrust EV, Eisen JA, Worden AZ. Phosphate transporters in marine phytoplankton and their viruses: cross-domain commonalities in viral-host gene exchanges. Environmental Microbiology. 14: 162-76. PMID 21914098 DOI: 10.1111/J.1462-2920.2011.02576.X  0.6
2012 Li E, Hamm CM, Gulati AS, Sartor RB, Chen H, Wu X, Zhang T, Rohlf FJ, Zhu W, Gu C, Robertson CE, Pace NR, Boedeker EC, Harpaz N, Yuan J, ... Weinstock GM, et al. Permutation-based repeated measures ANCOVA results for each of the six phyla/subphyla bacterial categories (Clade). Plos One. DOI: 10.1371/Journal.Pone.0026284.T003  0.48
2011 Holtz LR, Wylie KM, Sodergren E, Jiang Y, Franz CJ, Weinstock GM, Storch GA, Wang D. Astrovirus MLB2 viremia in febrile child. Emerging Infectious Diseases. 17: 2050-2. PMID 22099095 DOI: 10.3201/Eid1711.110496  0.6
2011 Lindblad-Toh K, Garber M, Zuk O, Lin MF, Parker BJ, Washietl S, Kheradpour P, Ernst J, Jordan G, Mauceli E, Ward LD, Lowe CB, Holloway AK, Clamp M, Gnerre S, ... ... Weinstock GM, et al. A high-resolution map of human evolutionary constraint using 29 mammals. Nature. 478: 476-82. PMID 21993624 DOI: 10.1038/Nature10530  0.6
2011 Arias CA, Panesso D, McGrath DM, Qin X, Mojica MF, Miller C, Diaz L, Tran TT, Rincon S, Barbu EM, Reyes J, Roh JH, Lobos E, Sodergren E, Pasqualini R, ... ... Weinstock GM, et al. Genetic basis for in vivo daptomycin resistance in enterococci. The New England Journal of Medicine. 365: 892-900. PMID 21899450 DOI: 10.1056/Nejmoa1011138  0.6
2011 Renfree MB, Papenfuss AT, Deakin JE, Lindsay J, Heider T, Belov K, Rens W, Waters PD, Pharo EA, Shaw G, Wong ES, Lefèvre CM, Nicholas KR, Kuroki Y, Wakefield MJ, ... ... Weinstock G, et al. Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development. Genome Biology. 12: R81. PMID 21854559 DOI: 10.1186/Gb-2011-12-8-R81  0.6
2011 Church DM, Schneider VA, Graves T, Auger K, Cunningham F, Bouk N, Chen HC, Agarwala R, McLaren WM, Ritchie GR, Albracht D, Kremitzki M, Rock S, Kotkiewicz H, Kremitzki C, ... ... Weinstock G, et al. Modernizing reference genome assemblies. Plos Biology. 9: e1001091. PMID 21750661 DOI: 10.1371/Journal.Pbio.1001091  0.6
2011 Šmajs D, Zobaníková M, Strouhal M, Čejková D, Dugan-Rocha S, Pospíšilová P, Norris SJ, Albert T, Qin X, Hallsworth-Pepin K, Buhay C, Muzny DM, Chen L, Gibbs RA, Weinstock GM. Complete genome sequence of Treponema paraluiscuniculi, strain Cuniculi A: the loss of infectivity to humans is associated with genome decay. Plos One. 6: e20415. PMID 21655244 DOI: 10.1371/Journal.Pone.0020415  0.6
2011 Bowne SJ, Humphries MM, Sullivan LS, Kenna PF, Tam LC, Kiang AS, Campbell M, Weinstock GM, Koboldt DC, Ding L, Fulton RS, Sodergren EJ, Allman D, Millington-Ward S, Palfi A, et al. A dominant mutation in RPE65 identified by whole-exome sequencing causes retinitis pigmentosa with choroidal involvement. European Journal of Human Genetics : Ejhg. 19: 1074-81. PMID 21654732 DOI: 10.1038/Ejhg.2011.86  0.6
2011 Weinstock GM. The volatile microbiome. Genome Biology. 12: 114. PMID 21635714 DOI: 10.1186/Gb-2011-12-5-114  0.6
2011 Nallapareddy SR, Sillanpää J, Mitchell J, Singh KV, Chowdhury SA, Weinstock GM, Sullam PM, Murray BE. Conservation of Ebp-type pilus genes among Enterococci and demonstration of their role in adherence of Enterococcus faecalis to human platelets. Infection and Immunity. 79: 2911-20. PMID 21502588 DOI: 10.1128/Iai.00039-11  0.6
2011 Ye L, Hillier LW, Minx P, Thane N, Locke DP, Martin JC, Chen L, Mitreva M, Miller JR, Haub KV, Dooling DJ, Mardis ER, Wilson RK, Weinstock GM, Warren WC. A vertebrate case study of the quality of assemblies derived from next-generation sequences. Genome Biology. 12: R31. PMID 21453517 DOI: 10.1186/Gb-2011-12-3-R31  0.6
2011 Suen G, Teiling C, Li L, Holt C, Abouheif E, Bornberg-Bauer E, Bouffard P, Caldera EJ, Cash E, Cavanaugh A, Denas O, Elhaik E, Favé MJ, Gadau J, Gibson JD, ... ... Weinstock GM, et al. The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle. Plos Genetics. 7: e1002007. PMID 21347285 DOI: 10.1371/Journal.Pgen.1002007  0.6
2011 Bowne SJ, Sullivan LS, Koboldt DC, Ding L, Fulton R, Abbott RM, Sodergren EJ, Birch DG, Wheaton DH, Heckenlively JR, Liu Q, Pierce EA, Weinstock GM, Daiger SP. Identification of disease-causing mutations in autosomal dominant retinitis pigmentosa (adRP) using next-generation DNA sequencing. Investigative Ophthalmology & Visual Science. 52: 494-503. PMID 20861475 DOI: 10.1167/Iovs.10-6180  0.6
2011 Renfree MB, Papenfuss AT, Deakin JE, Lindsay J, Heider T, Belov K, Rens W, Waters PD, Pharo EA, Shaw G, Wong ESW, Lefèvre CM, Nicholas KR, Kuroki Y, Wakefield MJ, ... ... Weinstock G, et al. Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development Genome Biology. 12. DOI: 10.1186/Gb-2011-12-12-414  0.6
2011 Zhang T, DeSimone RA, Chen H, Hamm CM, Yuan J, Gong QQ, Hunt SR, Dassopoulos T, Newberry RD, Frank DN, Robertson CE, Pace NR, Sodergren E, Weinstock G, Jiao X, et al. Cluster analysis of genome-wide expression differences in disease-unaffected ileal mucosa in inflammatory bowel diseases 2011 Ieee 1st International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2011. 220-225. DOI: 10.1109/ICCABS.2011.5729884  0.6
2011 Weinstock GM. The Human Microbiome Project Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches. 307-312. DOI: 10.1002/9781118010518.Ch35  0.6
2011 Weinstock GM. The Impact of Next-Generation Sequencing Technologies on Metagenomics Handbook of Molecular Microbial Ecology I: Metagenomics and Complementary Approaches. 143-147. DOI: 10.1002/9781118010518.ch18  0.6
2010 Mikalová L, Strouhal M, Čejková D, Zobaníková M, Pospíšilová P, Norris SJ, Sodergren E, Weinstock GM, Šmajs D. Genome analysis of Treponema pallidum subsp. pallidum and subsp. pertenue strains: most of the genetic differences are localized in six regions. Plos One. 5: e15713. PMID 21209953 DOI: 10.1371/Journal.Pone.0015713  0.6
2010 Nelson DE, Van Der Pol B, Dong Q, Revanna KV, Fan B, Easwaran S, Sodergren E, Weinstock GM, Diao L, Fortenberry JD. Characteristic male urine microbiomes associate with asymptomatic sexually transmitted infection. Plos One. 5: e14116. PMID 21124791 DOI: 10.1371/Journal.Pone.0014116  0.6
2010 Dougan G, Weinstock GM. A new era in the genomics of bacteria. Current Opinion in Microbiology. 13: 616-8. PMID 20846901 DOI: 10.1016/J.Mib.2010.08.008  0.6
2010 Marri PR, Paniscus M, Weyand NJ, Rendón MA, Calton CM, Hernández DR, Higashi DL, Sodergren E, Weinstock GM, Rounsley SD, So M. Genome sequencing reveals widespread virulence gene exchange among human Neisseria species. Plos One. 5: e11835. PMID 20676376 DOI: 10.1371/Journal.Pone.0011835  0.6
2010 Nelson KE, Weinstock GM, Highlander SK, Worley KC, Creasy HH, Wortman JR, Rusch DB, Mitreva M, Sodergren E, Chinwalla AT, Feldgarden M, Gevers D, Haas BJ, Madupu R, et al. A catalog of reference genomes from the human microbiome. Science (New York, N.Y.). 328: 994-9. PMID 20489017 DOI: 10.1126/Science.1183605  0.6
2010 Ding L, Ellis MJ, Li S, Larson DE, Chen K, Wallis JW, Harris CC, McLellan MD, Fulton RS, Fulton LL, Abbott RM, Hoog J, Dooling DJ, Koboldt DC, Schmidt H, ... ... Weinstock GM, et al. Genome remodelling in a basal-like breast cancer metastasis and xenograft. Nature. 464: 999-1005. PMID 20393555 DOI: 10.1038/Nature08989  0.6
2010 Lewis T, Loman NJ, Bingle L, Jumaa P, Weinstock GM, Mortiboy D, Pallen MJ. High-throughput whole-genome sequencing to dissect the epidemiology of Acinetobacter baumannii isolates from a hospital outbreak. The Journal of Hospital Infection. 75: 37-41. PMID 20299126 DOI: 10.1016/J.Jhin.2010.01.012  0.6
2010 Daiger SP, Sullivan LS, Bowne SJ, Birch DG, Heckenlively JR, Pierce EA, Weinstock GM. Targeted high-throughput DNA sequencing for gene discovery in retinitis pigmentosa. Advances in Experimental Medicine and Biology. 664: 325-31. PMID 20238032 DOI: 10.1007/978-1-4419-1399-9_37  0.6
2010 Snyder LA, Loman NJ, Linton JD, Langdon RR, Weinstock GM, Wren BW, Pallen MJ. Simple sequence repeats in Helicobacter canadensis and their role in phase variable expression and C-terminal sequence switching. Bmc Genomics. 11: 67. PMID 20105305 DOI: 10.1186/1471-2164-11-67  0.6
2010 Shen Y, Wan Z, Coarfa C, Drabek R, Chen L, Ostrowski EA, Liu Y, Weinstock GM, Wheeler DA, Gibbs RA, Yu F. A SNP discovery method to assess variant allele probability from next-generation resequencing data. Genome Research. 20: 273-80. PMID 20019143 DOI: 10.1101/Gr.096388.109  0.6
2010 Salzman NH, Hung K, Haribhai D, Chu H, Karlsson-Sjöberg J, Amir E, Teggatz P, Barman M, Hayward M, Eastwood D, Stoel M, Zhou Y, Sodergren E, Weinstock GM, Bevins CL, et al. Enteric defensins are essential regulators of intestinal microbial ecology. Nature Immunology. 11: 76-83. PMID 19855381 DOI: 10.1038/Ni.1825  0.6
2010 Jaffe D, Muenzer J, Storch G, Weinstock G, Sodergren E, Wylie K, Arens M, Buller R. The Human Virome in Children and its Relationship to Febrile Illness Nature Precedings. 5: 1-1. DOI: 10.1038/Npre.2010.5319.1  0.48
2010 Tarr PI, Warner B, Sodergren E, Shannon W, Hamvas A, Magrini V, Weinstock G. The Neonatal Microbiome and Necrotizing Enterocolitis. Nature Precedings. DOI: 10.1038/Npre.2010.5285.1  0.48
2010 Yilmaz P, Kottmann R, Field D, Knight R, Cole JR, Amaral-Zettler L, Gilbert JA, Karsch-Mizrachi I, Johnston A, Cochrane G, Vaughan R, Hunter C, Park J, Morrison N, Rocca-Serra P, ... ... Weinstock GM, et al. The “Minimum Information about an ENvironmental Sequence” (MIENS) specification Nature Precedings. 5: 1-1. DOI: 10.1038/Npre.2010.5252.1  0.48
2010 Li E, Sodergren E, Weinstock G, Stappenbeck T, Frank D, Robertson C, Pace N, Zhu W, Boedeker E, Sartor RB, Tarr P, Mayer L, Dietz D. Effect of Crohn’s Disease Risk Alleles on Enteric Microbiota Marker Paper Nature Precedings. DOI: 10.1038/Npre.2010.4975.1  0.48
2009 Chain PS, Grafham DV, Fulton RS, Fitzgerald MG, Hostetler J, Muzny D, Ali J, Birren B, Bruce DC, Buhay C, Cole JR, Ding Y, Dugan S, Field D, Garrity GM, ... ... Weinstock G, et al. Genomics. Genome project standards in a new era of sequencing. Science (New York, N.Y.). 326: 236-7. PMID 19815760 DOI: 10.1126/Science.1180614  0.6
2009 Birney E, Hudson TJ, Green ED, Gunter C, Eddy S, Rogers J, Harris JR, Ehrlich SD, Apweiler R, Austin CP, Berglund L, Bobrow M, Bountra C, Brookes AJ, ... ... Weinstock G, et al. Prepublication data sharing. Nature. 461: 168-70. PMID 19741685 DOI: 10.1038/461168A  0.48
2009 Sillanpää J, Nallapareddy SR, Qin X, Singh KV, Muzny DM, Kovar CL, Nazareth LV, Gibbs RA, Ferraro MJ, Steckelberg JM, Weinstock GM, Murray BE. A collagen-binding adhesin, Acb, and ten other putative MSCRAMM and pilus family proteins of Streptococcus gallolyticus subsp. gallolyticus (Streptococcus bovis Group, biotype I). Journal of Bacteriology. 191: 6643-53. PMID 19717590 DOI: 10.1128/Jb.00909-09  0.6
2009 Loman NJ, Snyder LAS, Linton JD, Langdon R, Lawson AJ, Weinstock GM, Wren BW, Pallen MJ. Genome sequence of the emerging pathogen Helicobacter canadensis Journal of Bacteriology. 191: 5566-5567. PMID 19542273 DOI: 10.1128/Jb.00729-09  0.6
2009 Koboldt DC, Chen K, Wylie T, Larson DE, McLellan MD, Mardis ER, Weinstock GM, Wilson RK, Ding L. VarScan: variant detection in massively parallel sequencing of individual and pooled samples. Bioinformatics (Oxford, England). 25: 2283-5. PMID 19542151 DOI: 10.1093/Bioinformatics/Btp373  0.6
2009 Matejková P, Flasarová M, Zákoucká H, Borek M, Kremenová S, Arenberger P, Woznicová V, Weinstock GM, Smajs D. Macrolide treatment failure in a case of secondary syphilis: a novel A2059G mutation in the 23S rRNA gene of Treponema pallidum subsp. pallidum. Journal of Medical Microbiology. 58: 832-6. PMID 19429763 DOI: 10.1099/Jmm.0.007542-0  0.6
2009 Liu Y, Qin X, Song XZH, Jiang H, Shen Y, Durbin KJ, Lien S, Kent MP, Sodeland M, Ren Y, Zhang L, Sodergren E, Havlak P, Worley KC, Weinstock GM, et al. Bos taurus genome assembly Bmc Genomics. 10. PMID 19393050 DOI: 10.1186/1471-2164-10-180  0.6
2009 Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, ... Weinstock GM, et al. Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds. Science (New York, N.Y.). 324: 528-32. PMID 19390050 DOI: 10.1126/Science.1167936  0.6
2009 Elsik CG, Tellam RL, Worley KC, Gibbs RA, Muzny DM, Weinstock GM, Adelson DL, Eichler EE, Elnitski L, Guigó R, Hamernik DL, Kappes SM, Lewin HA, Lynn DJ, et al. The genome sequence of taurine cattle: a window to ruminant biology and evolution. Science (New York, N.Y.). 324: 522-8. PMID 19390049 DOI: 10.1126/Science.1169588  0.6
2008 Ding L, Getz G, Wheeler DA, Mardis ER, McLellan MD, Cibulskis K, Sougnez C, Greulich H, Muzny DM, Morgan MB, Fulton L, Fulton RS, Zhang Q, Wendl MC, Lawrence MS, ... ... Weinstock GM, et al. Somatic mutations affect key pathways in lung adenocarcinoma. Nature. 455: 1069-75. PMID 18948947 DOI: 10.1038/Nature07423  0.6
2008 Sillanpää J, Nallapareddy SR, Prakash VP, Qin X, Höök M, Weinstock GM, Murray BE. Identification and phenotypic characterization of a second collagen adhesin, Scm, and genome-based identification and analysis of 13 other predicted MSCRAMMs, including four distinct pilus loci, in Enterococcus faecium. Microbiology (Reading, England). 154: 3199-211. PMID 18832325 DOI: 10.1099/Mic.0.2008/017319-0  0.6
2008 McLendon R, Friedman A, Bigner D, Van Meir EG, Brat DJ, Mastrogianakis GM, Olson JJ, Mikkelsen T, Lehman N, Aldape K, Yung WKA, Bogler O, Weinstein JN, VandenBerg S, Berger M, ... ... Weinstock GM, et al. Comprehensive genomic characterization defines human glioblastoma genes and core pathways Nature. 455: 1061-1068. PMID 18772890 DOI: 10.1038/Nature07385  0.6
2008 Gao H, Pattison D, Yan T, Klingeman DM, Wang X, Petrosino J, Hemphill L, Wan X, Leaphart AB, Weinstock GM, Palzkill T, Zhou J. Generation and validation of a Shewanella oneidensis MR-1 clone set for protein expression and phage display. Plos One. 3: e2983. PMID 18714347 DOI: 10.1371/Journal.Pone.0002983  0.6
2008 Wang X, Gao H, Shen Y, Weinstock GM, Zhou J, Palzkill T. A high-throughput percentage-of-binding strategy to measure binding energies in DNA-protein interactions: application to genome-scale site discovery. Nucleic Acids Research. 36: 4863-71. PMID 18653527 DOI: 10.1093/Nar/Gkn477  0.6
2008 Bourgogne A, Garsin DA, Qin X, Singh KV, Sillanpaa J, Yerrapragada S, Ding Y, Dugan-Rocha S, Buhay C, Shen H, Chen G, Williams G, Muzny D, Maadani A, Fox KA, ... ... Weinstock GM, et al. Large scale variation in Enterococcus faecalis illustrated by the genome analysis of strain OG1RF. Genome Biology. 9: R110. PMID 18611278 DOI: 10.1186/Gb-2008-9-7-R110  0.6
2008 Matejková P, Strouhal M, Smajs D, Norris SJ, Palzkill T, Petrosino JF, Sodergren E, Norton JE, Singh J, Richmond TA, Molla MN, Albert TJ, Weinstock GM. Complete genome sequence of Treponema pallidum ssp. pallidum strain SS14 determined with oligonucleotide arrays. Bmc Microbiology. 8: 76. PMID 18482458 DOI: 10.1186/1471-2180-8-76  0.6
2008 Twigger SN, Pruitt KD, Fernández-Suárez XM, Karolchik D, Worley KC, Maglott DR, Brown G, Weinstock G, Gibbs RA, Kent J, Birney E, Jacob HJ. What everybody should know about the rat genome and its online resources. Nature Genetics. 40: 523-7. PMID 18443589 DOI: 10.1038/Ng0508-523  0.6
2008 Wheeler DA, Srinivasan M, Egholm M, Shen Y, Chen L, McGuire A, He W, Chen YJ, Makhijani V, Roth GT, Gomes X, Tartaro K, Niazi F, Turcotte CL, Irzyk GP, ... ... Weinstock GM, et al. The complete genome of an individual by massively parallel DNA sequencing. Nature. 452: 872-6. PMID 18421352 DOI: 10.1038/Nature06884  0.6
2008 Zhang ZD, Weinstock G, Gerstein M. Rapid evolution by positive Darwinian selection in T-cell antigen CD4 in primates. Journal of Molecular Evolution. 66: 446-56. PMID 18414925 DOI: 10.1007/S00239-008-9097-1  0.4
2008 Richards S, Gibbs RA, Weinstock GM, Brown SJ, Denell R, Beeman RW, Gibbs R, Beeman RW, Brown SJ, Bucher G, Friedrich M, Grimmelikhuijzen CJ, Klingler M, Lorenzen M, ... ... Weinstock GM, ... ... Weinstock G, ... ... Weinstock G, et al. The genome of the model beetle and pest Tribolium castaneum. Nature. 452: 949-55. PMID 18362917 DOI: 10.1038/Nature06784  0.6
2008 Park Y, Aikins J, Wang LJ, Beeman RW, Oppert B, Lord JC, Brown SJ, Lorenzen MD, Richards S, Weinstock GM, Gibbs RA. Analysis of transcriptome data in the red flour beetle, Tribolium castaneum. Insect Biochemistry and Molecular Biology. 38: 380-6. PMID 18342244 DOI: 10.1016/J.Ibmb.2007.09.008  0.6
2008 Brinkman MB, McGill MA, Pettersson J, Rogers A, Matejková P, Smajs D, Weinstock GM, Norris SJ, Palzkill T. A novel Treponema pallidum antigen, TP0136, is an outer membrane protein that binds human fibronectin. Infection and Immunity. 76: 1848-57. PMID 18332212 DOI: 10.1128/Iai.01424-07  0.6
2008 Durfee T, Nelson R, Baldwin S, Plunkett G, Burland V, Mau B, Petrosino JF, Qin X, Muzny DM, Ayele M, Gibbs RA, Csörgo B, Pósfai G, Weinstock GM, Blattner FR. The complete genome sequence of Escherichia coli DH10B: Insights into the biology of a laboratory workhorse Journal of Bacteriology. 190: 2597-2606. PMID 18245285 DOI: 10.1128/Jb.01695-07  0.6
2008 Worley KC, Weinstock GM, Gibbs RA. Rats in the genomic era Physiological Genomics. 32: 273-282. PMID 18029439 DOI: 10.1152/Physiolgenomics.00208.2007  0.6
2007 Zhang ZD, Cayting P, Weinstock G, Gerstein M. Analysis of nuclear receptor pseudogenes in vertebrates: how the silent tell their stories. Molecular Biology and Evolution. 25: 131-43. PMID 18065488 DOI: 10.1093/Molbev/Msm251  0.32
2007 Aronstein KA, Murray KD, de León JH, Qin X, Weinstock GM. High mobility group (HMG-box) genes in the honeybee fungal pathogen Ascosphaera apis. Mycologia. 99: 553-61. PMID 18065006 DOI: 10.3852/Mycologia.99.4.553  0.6
2007 Highlander SK, Hultén KG, Qin X, Jiang H, Yerrapragada S, Mason EO, Shang Y, Williams TM, Fortunov RM, Liu Y, Igboeli O, Petrosino J, Tirumalai M, Uzman A, Fox GE, ... ... Weinstock GM, et al. Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureus. Bmc Microbiology. 7: 99. PMID 17986343 DOI: 10.1186/1471-2180-7-99  0.6
2007 Miller W, Rosenbloom K, Hardison RC, Hou M, Taylor J, Raney B, Burhans R, King DC, Baertsch R, Blankenberg D, Kosakovsky Pond SL, Nekrutenko A, Giardine B, Harris RS, Tyekucheva S, ... ... Weinstock GM, et al. 28-way vertebrate alignment and conservation track in the UCSC Genome Browser. Genome Research. 17: 1797-808. PMID 17984227 DOI: 10.1101/Gr.6761107  0.6
2007 Weir BA, Woo MS, Getz G, Perner S, Ding L, Beroukhim R, Lin WM, Province MA, Kraja A, Johnson LA, Shah K, Sato M, Thomas RK, Barletta JA, Borecki IB, ... ... Weinstock GM, et al. Characterizing the cancer genome in lung adenocarcinoma. Nature. 450: 893-8. PMID 17982442 DOI: 10.1038/Nature06358  0.6
2007 Albert TJ, Molla MN, Muzny DM, Nazareth L, Wheeler D, Song X, Richmond TA, Middle CM, Rodesch MJ, Packard CJ, Weinstock GM, Gibbs RA. Direct selection of human genomic loci by microarray hybridization. Nature Methods. 4: 903-5. PMID 17934467 DOI: 10.1038/Nmeth1111  0.6
2007 Gioia J, Yerrapragada S, Qin X, Jiang H, Igboeli OC, Muzny D, Dugan-Rocha S, Ding Y, Hawes A, Liu W, Perez L, Kovar C, Dinh H, Lee S, Nazareth L, ... ... Weinstock GM, et al. Paradoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032. Plos One. 2: e928. PMID 17895969 DOI: 10.1371/Journal.Pone.0000928  0.6
2007 Strouhal M, Smajs D, Matejková P, Sodergren E, Amin AG, Howell JK, Norris SJ, Weinstock GM. Genome differences between Treponema pallidum subsp. pallidum strain Nichols and T. paraluiscuniculi strain Cuniculi A. Infection and Immunity. 75: 5859-66. PMID 17893135 DOI: 10.1128/Iai.00709-07  0.6
2007 Karpathy SE, Qin X, Gioia J, Jiang H, Liu Y, Petrosino JF, Yerrapragada S, Fox GE, Haake SK, Weinstock GM, Highlander SK. Genome sequence of Fusobacterium nucleatum subspecies polymorphum - a genetically tractable fusobacterium. Plos One. 2: e659. PMID 17668047 DOI: 10.1371/Journal.Pone.0000659  0.6
2007 Margulies EH, Cooper GM, Asimenos G, Thomas DJ, Dewey CN, Siepel A, Birney E, Keefe D, Schwartz AS, Hou M, Taylor J, Nikolaev S, Montoya-Burgos JI, Löytynoja A, Whelan S, ... ... Weinstock GM, et al. Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome. Genome Research. 17: 760-74. PMID 17567995 DOI: 10.1101/Gr.6034307  0.6
2007 Weinstock GM. ENCODE: More genomic empowerment Genome Research. 17: 667-668. PMID 17567987 DOI: 10.1101/Gr.6534207  0.6
2007 Gibbs RA, Rogers J, Katze MG, Bumgarner R, Weinstock GM, Mardis ER, Remington KA, Strausberg RL, Venter JC, Wilson RK, Batzer MA, Bustamante CD, Eichler EE, Hahn MW, et al. Evolutionary and biomedical insights from the rhesus macaque genome. Science (New York, N.Y.). 316: 222-34. PMID 17431167 DOI: 10.1126/Science.1139247  0.6
2007 Solignac M, Zhang L, Mougel F, Li B, Vautrin D, Monnerot M, Cornuet JM, Worley KC, Weinstock GM, Gibbs RA. The genome of Apis mellifera: Dialog between linkage mapping and sequence assembly Genome Biology. 8. PMID 17381825 DOI: 10.1186/Gb-2007-8-3-403  0.6
2007 Elsik CG, Mackey AJ, Reese JT, Milshina NV, Roos DS, Weinstock GM. Creating a honey bee consensus gene set. Genome Biology. 8: R13. PMID 17241472 DOI: 10.1186/Gb-2007-8-1-R13  0.6
2006 Sodergren E, Shen Y, Song X, Zhang L, Gibbs RA, Weinstock GM. Shedding genomic light on Aristotle's lantern Developmental Biology. 300: 2-8. PMID 17097628 DOI: 10.1016/J.Ydbio.2006.10.005  0.6
2006 Sodergren E, Weinstock GM, Davidson EH, Cameron RA, Gibbs RA, Angerer RC, Angerer LM, Arnone MI, Burgess DR, Burke RD, Coffman JA, Dean M, Elphick MR, Ettensohn CA, et al. The genome of the sea urchin Strongylocentrotus purpuratus. Science (New York, N.Y.). 314: 941-52. PMID 17095691 DOI: 10.1126/Science.1133609  1
2006 . Insights into social insects from the genome of the honeybee Apis mellifera. Nature. 443: 931-49. PMID 17073008 DOI: 10.1038/Nature05260  0.6
2006 Qin X, Evans JD, Aronstein KA, Murray KD, Weinstock GM. Genome sequences of the honey bee pathogens Paenibacillus larvae and Ascosphaera apis. Insect Molecular Biology. 15: 715-8. PMID 17069642 DOI: 10.1111/J.1365-2583.2006.00694.X  0.6
2006 Robinson GE, Evans JD, Maleszka R, Robertson HM, Weaver DB, Worley K, Gibbs RA, Weinstock GM. Sweetness and light: illuminating the honey bee genome. Insect Molecular Biology. 15: 535-9. PMID 17069628 DOI: 10.1111/J.1365-2583.2006.00698.X  0.6
2006 Savard J, Tautz D, Richards S, Weinstock GM, Gibbs RA, Werren JH, Tettelin H, Lercher MJ. Phylogenomic analysis reveals bees and wasps (Hymenoptera) at the base of the radiation of Holometabolous insects. Genome Research. 16: 1334-8. PMID 17065606 DOI: 10.1101/Gr.5204306  0.6
2006 Elsik CG, Worley KC, Zhang L, Milshina NV, Jiang H, Reese JT, Childs KL, Venkatraman A, Dickens CM, Weinstock GM, Gibbs RA. Community annotation: procedures, protocols, and supporting tools. Genome Research. 16: 1329-33. PMID 17065605 DOI: 10.1101/Gr.5580606  0.6
2006 Gioia J, Qin X, Jiang H, Clinkenbeard K, Lo R, Liu Y, Fox GE, Yerrapragada S, McLeod MP, McNeill TZ, Hemphill L, Sodergren E, Wang Q, Muzny DM, Homsi FJ, ... Weinstock GM, et al. The genome sequence of Mannheimia haemolytica A1: insights into virulence, natural competence, and Pasteurellaceae phylogeny. Journal of Bacteriology. 188: 7257-66. PMID 17015664 DOI: 10.1128/Jb.00675-06  0.6
2006 Petrosino JF, Xiang Q, Karpathy SE, Jiang H, Yerrapragada S, Liu Y, Gioia J, Hemphill L, Gonzalez A, Raghavan TM, Uzman A, Fox GE, Highlander S, Reichard M, Morton RJ, ... ... Weinstock GM, et al. Chromosome rearrangement and diversification of Francisella tularensis revealed by the type B (OSU18) genome sequence. Journal of Bacteriology. 188: 6977-85. PMID 16980500 DOI: 10.1128/Jb.00506-06  0.6
2006 Muzny DM, Scherer SE, Kaul R, Wang J, Yu J, Sudbrak R, Buhay CJ, Chen R, Cree A, Ding Y, Dugan-Rocha S, Gill R, Gunaratne P, Harris RA, Hawes AC, ... ... Weinstock G, et al. The DNA sequence, annotation and analysis of human chromosome 3. Nature. 440: 1194-8. PMID 16641997 DOI: 10.1038/Nature04728  0.44
2006 Highlander SK, Weissenberger S, Alvarez LE, Weinstock GM, Berget PB. Complete nucleotide sequence of a P2 family lysogenic bacteriophage, varphiMhaA1-PHL101, from Mannheimia haemolytica serotype A1. Virology. 350: 79-89. PMID 16631219 DOI: 10.1016/J.Virol.2006.03.024  0.6
2006 Šmajs D, Matějková P, Weinstock GM. Recognition of pore-forming colicin Y by its cognate immunity protein Fems Microbiology Letters. 258: 108-113. PMID 16630264 DOI: 10.1111/J.1574-6968.2006.00201.X  0.6
2006 Childers CP, Newkirk HL, Honeycutt DA, Ramlachan N, Muzney DM, Sodergren E, Gibbs RA, Weinstock GM, Womack JE, Skow LC. Comparative analysis of the bovine MHC class IIb sequence identifies inversion breakpoints and three unexpected genes. Animal Genetics. 37: 121-9. PMID 16573526 DOI: 10.1111/J.1365-2052.2005.01395.X  0.6
2006 Scherer SE, Muzny DM, Buhay CJ, Chen R, Cree A, Ding Y, Dugan-Rocha S, Gill R, Gunaratne P, Harris RA, Hawes AC, Hernandez J, Hodgson AV, Hume J, Jackson A, ... ... Weinstock G, et al. The finished DNA sequence of human chromosome 12. Nature. 440: 346-51. PMID 16541075 DOI: 10.1038/Nature04569  0.6
2006 Brinkman MB, McKevitt M, McLoughlin M, Perez C, Howell J, Weinstock GM, Norris SJ, Palzkill T. Reactivity of antibodies from syphilis patients to a protein array representing the Treponema pallidum proteome. Journal of Clinical Microbiology. 44: 888-91. PMID 16517872 DOI: 10.1128/Jcm.44.3.888-891.2006  0.6
2005 Brettin T, Altherr MR, Du Y, Mason RM, Friedrich A, Potter L, Langford C, Keller TJ, Jens J, Howie H, Weyand NJ, Clary S, Prichard K, Wachocki S, Sodergren E, ... ... Weinstock G, et al. Expression capable library for studies of Neisseria gonorrhoeae, version 1.0. Bmc Microbiology. 5: 50. PMID 16137322 DOI: 10.1186/1471-2180-5-50  0.48
2005 Nallapareddy SR, Wenxiang H, Weinstock GM, Murray BE. Molecular characterization of a widespread, pathogenic, and antibiotic resistance-receptive Enterococcus faecalis lineage and dissemination of its putative pathogenicity island Journal of Bacteriology. 187: 5709-5718. PMID 16077117 DOI: 10.1128/Jb.187.16.5709-5718.2005  0.6
2005 Alford RL, Morris KE, Rives CM, Scherer SE, Weinstock G, Gibbs RA, Ghonima K, Belcher M, Valdes H, Sumners C, Law C, Reiff P. Genetic testing, biotechnology, and GMOs: A snapshot of public opinion, 2003 through 2004. Genetics in Medicine : Official Journal of the American College of Medical Genetics. 7: 454-5. PMID 16024979 DOI: 10.1097/01.Gim.0000170995.42857.B5  0.6
2005 Siepel A, Bejerano G, Pedersen JS, Hinrichs AS, Hou M, Rosenbloom K, Clawson H, Spieth J, Hillier LW, Richards S, Weinstock GM, Wilson RK, Gibbs RA, Kent WJ, Miller W, et al. Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes. Genome Research. 15: 1034-50. PMID 16024819 DOI: 10.1101/Gr.3715005  0.6
2005 McKevitt M, Brinkman MB, McLoughlin M, Perez C, Howell JK, Weinstock GM, Norris SJ, Palzkill T. Genome scale identification of Treponema pallidum antigens. Infection and Immunity. 73: 4445-50. PMID 15972547 DOI: 10.1128/Iai.73.7.4445-4450.2005  0.6
2005 Eichinger L, Pachebat JA, Glöckner G, Rajandream MA, Sucgang R, Berriman M, Song J, Olsen R, Szafranski K, Xu Q, Tunggal B, Kummerfeld S, Madera M, Konfortov BA, Rivero F, ... ... Weinstock G, et al. The genome of the social amoeba Dictyostelium discoideum. Nature. 435: 43-57. PMID 15875012 DOI: 10.1038/Nature03481  0.6
2005 Smajs D, McKevitt M, Howell JK, Norris SJ, Cai WW, Palzkill T, Weinstock GM. Transcriptome of Treponema pallidum: gene expression profile during experimental rabbit infection. Journal of Bacteriology. 187: 1866-74. PMID 15716460 DOI: 10.1128/Jb.187.5.1866-1874.2005  0.6
2005 Milosavljevic A, Harris RA, Sodergren EJ, Jackson AR, Kalafus KJ, Hodgson A, Cree A, Dai W, Csuros M, Zhu B, de Jong PJ, Weinstock GM, Gibbs RA. Pooled genomic indexing of rhesus macaque. Genome Research. 15: 292-301. PMID 15687293 DOI: 10.1101/Gr.3162505  0.6
2005 Richards S, Liu Y, Bettencourt BR, Hradecky P, Letovsky S, Nielsen R, Thornton K, Hubisz MJ, Chen R, Meisel RP, Couronne O, Hua S, Smith MA, Zhang P, Liu J, ... ... Weinstock GM, et al. Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution. Genome Research. 15: 1-18. PMID 15632085 DOI: 10.1101/Gr.3059305  0.6
2005 Belmont JW, Boudreau A, Leal SM, Hardenbol P, Pasternak S, Wheeler DA, Willis TD, Yu F, Yang H, Gao Y, Hu H, Hu W, Li C, Lin W, Liu S, et al. A haplotype map of the human genome Nature. 437: 1299-1320. DOI: 10.1038/Nature04226  0.32
2004 McLeod MP, Qin X, Karpathy SE, Gioia J, Highlander SK, Fox GE, McNeill TZ, Jiang H, Muzny D, Jacob LS, Hawes AC, Sodergren E, Gill R, Hume J, Morgan M, ... ... Weinstock GM, et al. Complete genome sequence of Rickettsia typhi and comparison with sequences of other rickettsiae. Journal of Bacteriology. 186: 5842-55. PMID 15317790 DOI: 10.1128/Jb.186.17.5842-5855.2004  0.6
2004 Seshadri R, Myers GS, Tettelin H, Eisen JA, Heidelberg JF, Dodson RJ, Davidsen TM, DeBoy RT, Fouts DE, Haft DH, Selengut J, Ren Q, Brinkac LM, Madupu R, Kolonay J, ... ... Weinstock GM, et al. Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes. Proceedings of the National Academy of Sciences of the United States of America. 101: 5646-51. PMID 15064399 DOI: 10.1073/Pnas.0307639101  0.6
2004 Havlak P, Chen R, Durbin KJ, Egan A, Ren Y, Song XZ, Weinstock GM, Gibbs RA. The Atlas genome assembly system Genome Research. 14: 721-732. PMID 15060016 DOI: 10.1101/Gr.2264004  0.6
2004 Chen R, Sodergren E, Weinstock GM, Gibbs RA. Dynamic building of a BAC clone tiling path for the rat genome sequencing project Genome Research. 14: 679-684. PMID 15060010 DOI: 10.1101/Gr.2171704  0.6
2004 Zhang Z, Burch PE, Cooney AJ, Lanz RB, Pereira FA, Wu J, Gibbs RA, Weinstock G, Wheeler DA. Genomic analysis of the nuclear receptor family: new insights into structure, regulation, and evolution from the rat genome. Genome Research. 14: 580-90. PMID 15059999 DOI: 10.1101/Gr.2160004  0.6
2004 Gibbs RA, Weinstock GM, Metzker ML, Muzny DM, Sodergren EJ, Scherer S, Scott G, Steffen D, Worley KC, Burch PE, Okwuonu G, Hines S, Lewis L, DeRamo C, Delgado O, et al. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature. 428: 493-521. PMID 15057822 DOI: 10.1038/Nature02426  0.56
2004 Pal S, Mak S, Weinstock GM. Preparation of BAC libraries from bacterial genomes by in vitro packaging Methods in Molecular Biology (Clifton, N.J.). 255: 57-68. PMID 15020815 DOI: 10.1385/1-59259-752-1:057  0.6
2004 Smajs D, Norris SJ, Weinstock GM. Construction of small genome BAC library for functional and genomic applications. Methods in Molecular Biology (Clifton, N.J.). 255: 47-56. PMID 15020814 DOI: 10.1385/1-59259-752-1:047  0.6
2004 Zeng J, Teng F, Weinstock GM, Murray BE. Translocation of Enterococcus faecalis strains across a monolayer of polarized human enterocyte-like T84 cells. Journal of Clinical Microbiology. 42: 1149-54. PMID 15004067 DOI: 10.1128/Jcm.42.3.1149-1154.2004  0.6
2003 Martin KA, Siefert JL, Yerrapragada S, Lu Y, McNeill TZ, Moreno PA, Weinstock GM, Widger WR, Fox GE. Cyanobacterial signature genes. Photosynthesis Research. 75: 211-21. PMID 16228602 DOI: 10.1023/A:1023990402346  0.6
2003 Gibbs RA, Weinstock GM. Evolving methods for the assembly of large genomes Cold Spring Harbor Symposia On Quantitative Biology. 68: 189-194. PMID 15338617 DOI: 10.1101/Sqb.2003.68.189  0.6
2003 Teng F, Kawalec M, Weinstock GM, Hryniewicz W, Murray BE. An Enterococcus faecium secreted antigen, SagA, exhibits broad-spectrum binding to extracellular matrix proteins and appears essential for E. faecium growth. Infection and Immunity. 71: 5033-41. PMID 12933846 DOI: 10.1128/Iai.71.9.5033-5041.2003  0.6
2003 McKevitt M, Patel K, Smajs D, Marsh M, McLoughlin M, Norris SJ, Weinstock GM, Palzkill T. Systematic cloning of Treponema pallidum open reading frames for protein expression and antigen discovery. Genome Research. 13: 1665-74. PMID 12805273 DOI: 10.1101/Gr.288103  0.6
2003 Šmajs D, Šmarda J, Weinstock GM. The Escherichia fergusonii iucABCD iutA genes are located within a larger chromosomal region similar to pathogenicity islands Folia Microbiologica. 48: 139-147. PMID 12800494 DOI: 10.1007/Bf02930946  0.6
2003 Nallapareddy SR, Weinstock GM, Murray BE. Clinical isolates of Enterococcus faecium exhibit strain-specific collagen binding mediated by Acm, a new member of the MSCRAMM family Molecular Microbiology. 47: 1733-1747. PMID 12622825 DOI: 10.1046/J.1365-2958.2003.03417.X  0.6
2003 Belmont JW, Hardenbol P, Willis TD, Yu F, Yang H, Ch'Ang LY, Huang W, Liu B, Shen Y, Tam PKH, Tsui LC, Waye MMY, Wong JTF, Zeng C, Zhang Q, ... ... Weinstock GM, et al. The international HapMap project Nature. 426: 789-796. DOI: 10.1038/Nature02168  0.6
2002 Celniker SE, Wheeler DA, Kronmiller B, Carlson JW, Halpern A, Patel S, Adams M, Champe M, Dugan SP, Frise E, Hodgson A, George RA, Hoskins RA, Laverty T, Muzny DM, ... ... Weinstock G, et al. Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence. Genome Biology. 3: RESEARCH0079. PMID 12537568 DOI: 10.1186/Gb-2002-3-12-Research0079  0.6
2002 Singh KV, Weinstock GM, Murray BE. An Enterococcus faecalis ABC homologue (Lsa) is required for the resistance of this species to clindamycin and quinupristin-dalfopristin Antimicrobial Agents and Chemotherapy. 46: 1845-1850. PMID 12019099 DOI: 10.1128/Aac.46.6.1845-1850.2002  0.6
2002 Smajs D, Karpathy SE, Smarda J, Weinstock GM. Colicins produced by the Escherichia fergusonii strains closely resemble colicins encoded by Escherichia coli. Fems Microbiology Letters. 208: 259-62. PMID 11959446 DOI: 10.1111/J.1574-6968.2002.Tb11091.X  0.6
2002 Teng F, Jacques-Palaz KD, Weinstock GM, Murray BE. Evidence that the enterococcal polysaccharide antigen gene (epa) cluster is widespread in Enterococcus faecalis and influences resistance to phagocytic killing of E. faecalis. Infection and Immunity. 70: 2010-5. PMID 11895965 DOI: 10.1128/Iai.70.4.2010-2015.2002  0.6
2002 Teng F, Wang L, Singh KV, Murray BE, Weinstock GM. Involvement of PhoP-PhoS homologs in Enterococcus faecalis virulence. Infection and Immunity. 70: 1991-6. PMID 11895963 DOI: 10.1128/Iai.70.4.1991-1996.2002  0.6
2002 Smajs D, McKevitt M, Wang L, Howell JK, Norris SJ, Palzkill T, Weinstock GM. BAC library of T. pallidum DNA in E. coli. Genome Research. 12: 515-22. PMID 11875041 DOI: 10.1101/Gr.207302  0.6
2001 Jonas BM, Murray BE, Weinstock GM. Characterization of emeA, a norA homolog and multidrug resistance efflux pump, in Enterococcus faecalis Antimicrobial Agents and Chemotherapy. 45: 3574-3579. PMID 11709342 DOI: 10.1128/Aac.45.12.3574-3579.2001  0.6
2001 Chen R, Bouck JB, Weinstock GM, Gibbs RA. Comparing vertebrate whole-genome shotgun reads to the human genome Genome Research. 11: 1807-1816. PMID 11691844 DOI: 10.1101/Gr.203601  0.6
2001 Šmajs D, Weinstock GM. The iron- and temperature-regulated cjrBC genes of Shigella and enteroinvasive Escherichia coli strains code for colicin Js uptake Journal of Bacteriology. 183: 3958-3966. PMID 11395459 DOI: 10.1128/Jb.183.13.3958-3966.2001  0.6
2001 Šmajs D, Weinstock GM. Genetic organization of plasmid ColJs, encoding colicin Js activity, immunity, and release genes Journal of Bacteriology. 183: 3949-3957. PMID 11395458 DOI: 10.1128/Jb.183.13.3949-3957.2001  0.6
2001 Qin X, Singh KV, Weinstock GM, Murray BE. Characterization of fsr, a regulator controlling expression of gelatinase and serine protease in Enterococcus faecalis OG1RF. Journal of Bacteriology. 183: 3372-82. PMID 11344145 DOI: 10.1128/Jb.183.11.3372-3382.2001  0.6
2001 Davis DR, McAlpine JB, Pazoles CJ, Talbot MK, Alder EA, White C, Jonas BM, Murray BE, Weinstock GM, Rogers BL. Enterococcus faecalis multi-drug resistance transporters: application for antibiotic discovery. Journal of Molecular Microbiology and Biotechnology. 3: 179-84. PMID 11321571  0.6
2001 Norris SJ, Cox DL, Weinstock GM. Biology of Treponema pallidum: Correlation of functional activities with genome sequence data Journal of Molecular Microbiology and Biotechnology. 3: 37-62. PMID 11200228  0.6
2001 Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, Fitzhugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Weinstock GM, et al. Erratum: Initial sequencing and analysis of the human genome: International Human Genome Sequencing Consortium (Nature (2001) 409 (860-921)) Nature. 412: 565-566. DOI: 10.1038/35087627  0.48
2000 Norris SJ, Weinstock GM. The genome sequence of Treponema pallidum, the syphilis spirochete: will clinicians benefit? Current Opinion in Infectious Diseases. 13: 29-36. PMID 11964770 DOI: 10.1097/00001432-200002000-00006  0.6
2000 Hofnung M, Kunst F, Parsot C, Rapoport G, Weinstock GM. Microbial genomes 2000: Introduction Research in Microbiology. 151: 77-78. PMID 11203106  0.6
2000 Weinstock GM. Genomics and bacterial pathogenesis Emerging Infectious Diseases. 6: 496-504. PMID 10998381 DOI: 10.3201/Eid0605.000509  0.6
2000 Nallapareddy SR, Qin X, Weinstock GM, Höök M, Murray BE. Enterococcus faecalis adhesin, ace, mediates attachment to extracellular matrix proteins collagen type IV and laminin as well as collagen type I. Infection and Immunity. 68: 5218-24. PMID 10948147 DOI: 10.1128/Iai.68.9.5218-5224.2000  0.6
2000 Nallapareddy SR, Singh KV, Duh RW, Weinstock GM, Murray BE. Diversity of ace, a gene encoding a microbial surface component recognizing adhesive matrix molecules, from different strains of Enterococcus faecalis and evidence for production of ace during human infections Infection and Immunity. 68: 5210-5217. PMID 10948146 DOI: 10.1128/Iai.68.9.5210-5217.2000  0.6
2000 Weinstock GM, Smajs D, Hardham J, Norris SJ. From microbial genome sequence to applications Research in Microbiology. 151: 151-158. PMID 10865961 DOI: 10.1016/S0923-2508(00)00115-7  0.6
2000 Qin X, Singh KV, Weinstock GM, Murray BE. Effects of Enterococcus faecalis fsr genes on production of gelatinase and a serine protease and virulence. Infection and Immunity. 68: 2579-86. PMID 10768947 DOI: 10.1128/Iai.68.5.2579-2586.2000  0.6
2000 Xu Y, Singh KV, Qin X, Murray BE, Weinstock GM. Analysis of a gene cluster of Enterococcus faecalis involved in polysaccharide biosynthesis. Infection and Immunity. 68: 815-23. PMID 10639451 DOI: 10.1128/Iai.68.2.815-823.2000  0.6
1999 Rich RL, Kreikemeyer B, Owens RT, LaBrenz S, Narayana SV, Weinstock GM, Murray BE, Höök M. Ace is a collagen-binding MSCRAMM from Enterococcus faecalis. The Journal of Biological Chemistry. 274: 26939-45. PMID 10480905 DOI: 10.1074/Jbc.274.38.26939  0.6
1999 Murray BE, Weinstock GM. Enterococci: New aspects of an old organism Proceedings of the Association of American Physicians. 111: 328-334. PMID 10417741 DOI: 10.1046/j.1525-1381.1999.99241.x  0.6
1999 Coque TM, Singh KV, Weinstock GM, Murray BE. Characterization of dihydrofolate reductase genes from trimethoprim- susceptible and trimethoprim-resistant strains of Enterococcus faecalis Antimicrobial Agents and Chemotherapy. 43: 141-147. PMID 9869579 DOI: 10.1128/Aac.43.1.141  0.6
1998 Weinstock GM, Hardham JM, McLeod MP, Sodergren EJ, Norris SJ. The genome of Treponema pallidum: new light on the agent of syphilis. Fems Microbiology Reviews. 22: 323-32. PMID 9862125 DOI: 10.1111/J.1574-6976.1998.Tb00373.X  0.6
1998 Palzkill T, Huang W, Weinstock GM. Mapping protein-ligand interactions using whole genome phage display libraries Gene. 221: 79-83. PMID 9852952 DOI: 10.1016/S0378-1119(98)00425-9  0.6
1998 Qin X, Singh KV, Xu Y, Weinstock GM, Murray BE. Effect of disruption of a gene encoding an autolysin of Enterococcus faecalis OG1RF Antimicrobial Agents and Chemotherapy. 42: 2883-2888. PMID 9797220 DOI: 10.1128/Aac.42.11.2883  0.6
1998 Singh KV, Coque TM, Weinstock GM, Murray BE. In vivo testing of an Enterococcus faecalis efaA mutant and use of efaA homologs for species identification Fems Immunology and Medical Microbiology. 21: 323-331. PMID 9753005 DOI: 10.1111/J.1574-695X.1998.Tb01180.X  0.6
1998 Xiao J, Höök M, Weinstock GM, Murray BE. Conditional adherence of Enterococcus faecalis to extracellular matrix proteins Fems Immunology and Medical Microbiology. 21: 287-295. PMID 9753001 DOI: 10.1111/J.1574-695X.1998.Tb01176.X  0.6
1998 Xu Y, Murray BE, Weinstock GM. A cluster of genes involved in polysaccharide biosynthesis from Enterococcus faecalis OG1RF Infection and Immunity. 66: 4313-4323. PMID 9712783 DOI: 10.1128/Iai.66.9.4313-4323.1998  0.6
1998 Fraser CM, Norris SJ, Weinstock GM, White O, Sutton GG, Dodson R, Gwinn M, Hickey EK, Clayton R, Ketchum KA, Sodergren E, Hardham JM, McLeod MP, Salzberg S, Peterson J, et al. Complete genome sequence of Treponema pallidum, the syphilis spirochete. Science (New York, N.Y.). 281: 375-88. PMID 9665876 DOI: 10.1126/Science.281.5375.375  0.6
1998 Bianco PR, Weinstock GM. Characterization of RecA1332 in vivo and in vitro. A role for α-helix E as a liaison between the subunit-subunit interface and the DNA and ATP binding domains of RecA protein Genes to Cells. 3: 79-97. PMID 9605403 DOI: 10.1046/J.1365-2443.1998.00168.X  0.6
1998 Norris SJ, Fraser CM, Weinstock GM. Illuminating the agent of syphilis: The Treponema pallidum genome project Electrophoresis. 19: 551-553. PMID 9588801 DOI: 10.1002/Elps.1150190415  0.6
1998 Bianco PR, Weinstock GM. UTP is a cofactor for the DNA strand exchange reaction performed by the RecA protein of Escherichia coli Biochemistry. 37: 7313-7320. PMID 9585545 DOI: 10.1021/Bi9731293  0.6
1998 Teng F, Murray BE, Weinstock GM. Conjugal transfer of plasmid DNA from Escherichia coli to enterococci: a method to make insertion mutations. Plasmid. 39: 182-6. PMID 9571134 DOI: 10.1006/Plas.1998.1336  0.6
1998 Malathum K, Singh KV, Weinstock GM, Murray BE. Repetitive sequence-based PCR versus pulsed-field gel electrophoresis for typing of Enterococcus faecalis at the subspecies level Journal of Clinical Microbiology. 36: 211-215. PMID 9431949 DOI: 10.1128/Jcm.36.1.211-215.1998  0.6
1998 Xu Y, Jiang L, Jin X, Murray BE, Weinstock GM. Isolation of enterococcal antigen-encoding genes from genomic libraries Methods in Cell Science. 20: 95-106. DOI: 10.1023/A:1009847127291  0.6
1998 Qin X, Teng F, Xu Y, Singh KV, Weinstock GM, Murray BE. Targeted mutagenesis of enterococcal genes Methods in Cell Science. 20: 21-33. DOI: 10.1023/A:1009803328200  0.6
1997 Choudhary M, Mackenzie C, Nereng K, Sodergren E, Weinstock GM, Kaplan S. Low-resolution sequencing of Rhodobacter sphaeroides 2,4.1(T): Chromosome II is a true chromosome Microbiology. 143: 3085-3099. PMID 9353914 DOI: 10.1099/00221287-143-10-3085  0.6
1997 Hardham JM, Stamm LV, Porcella SF, Frye JG, Barnes NY, Howell JK, Mueller SL, Radolf JD, Weinstock GM, Norris SJ. Identification and transcriptional analysis of a Treponema pallidum operon encoding a putative ABC transport system, an iron-activated repressor protein homolog, and a glycolytic pathway enzyme homolog. Gene. 197: 47-64. PMID 9332349 DOI: 10.1016/S0378-1119(97)00234-5  0.6
1997 Xu Y, Jiang L, Murray BE, Weinstock GM. Enterococcus faecalis antigens in human infections Infection and Immunity. 65: 4207-4215. PMID 9317028 DOI: 10.1128/Iai.65.10.4207-4215.1997  0.6
1997 Sohocki MM, Sullivan LS, Harrison WR, Sodergren EJ, Elder FFB, Weinstock G, Tanase S, Daiger SP. Human glutamate pyruvate transaminase (GPT): Localization to 8q24.3, cDNA and genomic sequences, and polymorphic sites Genomics. 40: 247-252. PMID 9119391 DOI: 10.1006/Geno.1996.4604  0.6
1996 Pierson DL, Chidambaram M, Heath JD, Mallary L, Mishra SK, Sharma B, Weinstock GM. Epidemiology of Staphylococcus aureus during space flight. Fems Immunology and Medical Microbiology. 16: 273-81. PMID 9116646 DOI: 10.1111/J.1574-695X.1996.Tb00146.X  0.6
1996 Bianco PR, Weinstock GM. Interaction of the RecA protein of Escherichia coli with single-stranded oligodeoxyribonucleotides Nucleic Acids Research. 24: 4933-4939. PMID 9016663 DOI: 10.1093/Nar/24.24.4933  0.6
1996 Froshauer S, Silvia AM, Chidambaram M, Sharma B, Weinstock GM. Sensitization of bacteria to danofloxacin by temperate prophages Antimicrobial Agents and Chemotherapy. 40: 1561-1563. PMID 8726041 DOI: 10.1128/Aac.40.6.1561  0.6
1996 You Y, Elmore S, Colton LL, Mackenzie C, Stoops JK, Weinstock GM, Norris SJ. Characterization of the cytoplasmic filament protein gene (cfpA) of Treponema pallidum subsp. pallidum Journal of Bacteriology. 178: 3177-3187. PMID 8655496 DOI: 10.1128/Jb.178.11.3177-3187.1996  0.6
1996 Eraso JM, Chidambaram M, Weinstock GM. Increased production of colicin E1 in stationary phase Journal of Bacteriology. 178: 1928-1935. PMID 8606167 DOI: 10.1128/Jb.178.7.1928-1935.1996  0.6
1996 Lupski JR, Roth JR, Weinstock GM. Chromosomal duplications in bacteria, fruit flies, and humans American Journal of Human Genetics. 58: 21-27. PMID 8554058  0.6
1995 Walker EM, Howell JK, You Y, Hoffmaster AR, Heath JD, Weinstock GM, Norris SJ. Physical map of the genome of Treponema pallidum subsp. pallidum (Nichols). Journal of Bacteriology. 177: 1797-804. PMID 7896703 DOI: 10.1128/Jb.177.7.1797-1804.1995  0.6
1995 Petras SF, Chidambaram M, Illyes EF, Froshauer S, Weinstock GM, Reese CP. Antigenic and virulence properties of Pasteurella haemolytica leukotoxin mutants Infection and Immunity. 63: 1033-1039. PMID 7868224 DOI: 10.1128/Iai.63.3.1033-1039.1995  0.6
1995 Chidambaram M, Sharma B, Petras SF, Reese CP, Froshauer S, Weinstock GM. Isolation of Pasteurella haemolytica leukotoxin mutants Infection and Immunity. 63: 1027-1032. PMID 7868223 DOI: 10.1128/Iai.63.3.1027-1032.1995  0.6
1995 Mackenzie C, Chidambaram M, Sodergren EJ, Kaplan S, Weinstock GM. DNA repair mutants of Rhodobacter sphaeroides Journal of Bacteriology. 177: 3027-3035. PMID 7768798 DOI: 10.1128/Jb.177.11.3027-3035.1995  0.6
1995 Karlin S, Weinstock GM, Brendel V. Bacterial classifications derived from recA protein sequence comparisons. Journal of Bacteriology. 177: 6881-93. PMID 7592482 DOI: 10.1128/Jb.177.23.6881-6893.1995  0.6
1995 Li X, Weinstock GM, Murray BE. Generation of auxotrophic mutants of Enterococcus faecalis Journal of Bacteriology. 177: 6866-6873. PMID 7592480 DOI: 10.1128/Jb.177.23.6866-6873.1995  0.6
1994 Highlander SK, Weinstock GM. Static DNA bending and protein interactions within the Pasteurella haemolytica leukotoxin promoter region: Development of an activation model for leukotoxin transcriptional control Dna and Cell Biology. 13: 171-181. PMID 8179822 DOI: 10.1089/Dna.1994.13.171  0.6
1994 Choudhary M, Mackenzie C, Nereng KS, Sodergren E, Weinstock GM, Kaplan S. Multiple chromosomes in bacteria: Structure and function of chromosome II of Rhodobacter sphaeroides 2.4.1(T) Journal of Bacteriology. 176: 7694-7702. PMID 8002595 DOI: 10.1128/Jb.176.24.7694-7702.1994  0.6
1994 Bianco PR, Weinstock GM. Automated determination of β-galactosidase specific activity Biotechniques. 17: 974-976+978. PMID 7840979  0.6
1994 Weinstock GM. Bacterial genomes: Mapping and stability Asm News. 60: 73-78.  0.6
1993 Perkins JD, Heath JD, Sharma BR, Weinstock GM. XbaI and BlnI genomic cleavage maps of Escherichia coli K-12 strain MG1655 and comparative analysis of other strains. Journal of Molecular Biology. 232: 419-45. PMID 8393935 DOI: 10.1006/Jmbi.1993.1401  0.6
1993 Highlander SK, Wickersham EA, Garza O, Weinstock GM. Expression of the Pasteurella haemolytica leukotoxin is inhibited by a locus that encodes an ATP-binding cassette homolog Infection and Immunity. 61: 3942-3951. PMID 8359916 DOI: 10.1128/Iai.61.9.3942-3951.1993  0.6
1993 Murray BE, Singh KV, Ross RP, Heath JD, Dunny GM, Weinstock GM. Generation of restriction map of Enterococcus faecalis OG1 and investigation of growth requirements and regions encoding biosynthetic function Journal of Bacteriology. 175: 5216-5223. PMID 8349561 DOI: 10.1128/Jb.175.16.5216-5223.1993  0.6
1992 Heath JD, Perkins JD, Sharma B, Weinstock GM. NotI genomic cleavage map of Escherichia coli K-12 strain MG1655. Journal of Bacteriology. 174: 558-67. PMID 1729244 DOI: 10.1128/Jb.174.2.558-567.1992  0.6
1992 Eraso JM, Weinstock GM. Anaerobic control of colicin E1 production Journal of Bacteriology. 174: 5101-5109. PMID 1629167 DOI: 10.1128/Jb.174.15.5101-5109.1992  0.6
1992 Lupski JR, Weinstock GM. Short, interspersed repetitive DNA sequences in prokaryotic genomes Journal of Bacteriology. 174: 4525-4529. PMID 1624445 DOI: 10.1128/Jb.174.14.4525-4529.1992  0.6
1992 Perkins JD, Heath JD, Sharma BR, Weinstock GM. SfiI genomic cleavage map of Escherichia coli K-12 strain MG1655. Nucleic Acids Research. 20: 1129-37. PMID 1312707 DOI: 10.1093/Nar/20.5.1129  0.6
1991 Weinstock GM. RecA revealed New Biologist. 3: 126-129. PMID 2065008  0.6
1991 Weisemann JM, Weinstock GM. The promoter of the recA gene of Escherichia coli Biochimie. 73: 457-470. PMID 1911946 DOI: 10.1016/0300-9084(91)90113-F  0.6
1991 Heath JD, Weinstock GM. Tandem duplications of the lac region of the Escherichia coli chromosome. Biochimie. 73: 343-52. PMID 1911935 DOI: 10.1016/0300-9084(91)90099-M  0.6
1991 Murray BE, Singh KV, Markowitz SM, Lopardo HA, Patterson JE, Zervos MJ, Rubeglio E, Eliopoulos GM, Rice LB, Goldstein FW. Evidence for clonal spread of a single strain of beta-lactamase-producing Enterococcus (Streptococcus) faecalis to six hospitals in five states. The Journal of Infectious Diseases. 163: 780-5. PMID 1901330 DOI: 10.1093/Infdis/163.4.780  0.6
1991 Ku CY, Lu Q, Ussuf KK, Weinstock GM, Sanborn BM. Hormonal regulation of cytochrome oxidase subunit messenger RNAs in rat sertoli cells Molecular Endocrinology. 5: 1669-1676. PMID 1664046 DOI: 10.1210/Mend-5-11-1669  0.6
1990 Highlander SK, Engler MJ, Weinstock GM. Secretion and expression of the Pasteurella haemolytica leukotoxin Journal of Bacteriology. 172: 2343-2350. PMID 2185213 DOI: 10.1128/Jb.172.5.2343-2350.1990  0.6
1990 Murray BE, Singh KV, Heath JD, Sharma BR, Weinstock GM. Comparison of genomic DNAs of different enterococcal isolates using restriction endonucleases with infrequent recognition sites. Journal of Clinical Microbiology. 28: 2059-63. PMID 1977766 DOI: 10.1128/Jcm.28.9.2059-2063.1990  0.6
1989 Highlander SK, Chidambaram M, Engler MJ, Weinstock GM. DNA sequence of the Pasteurella haemolytica leukotoxin gene cluster Dna. 8: 15-28. PMID 2707120  0.6
1989 Salles B, Weinstock GM. Mutation of the promoter and LexA binding sites of cea, the gene encoding colicin E1 Mgg Molecular &Amp; General Genetics. 215: 483-489. PMID 2651893 DOI: 10.1007/Bf00427047  0.6
1989 Zoltick PW, Leibowitz JL, DeVries JR, Weinstock GM, Weiss SR. A general method for the induction and screening of antisera for cDNA-encoded polypeptides: antibodies specific for a coronavirus putative polymerase-encoding gene. Gene. 85: 413-20. PMID 2560756 DOI: 10.1016/0378-1119(89)90434-4  0.6
1989 Salles B, Weinstock GM. Interaction of the CRP-cAMP complex with the cea regulatory region Mgg Molecular &Amp; General Genetics. 215: 537-542. PMID 2540417 DOI: 10.1007/Bf00427053  0.6
1988 Weisemann JM, Weinstock GM. Mutations at the cysteine codons of the recA gene of Escherichia coli Dna. 7: 389-398. PMID 3060335  0.6
1988 Bremer E, Silhavy TJ, Weinstock GM. Transposition of λplacMu is mediated by the A protein altered at its carboxy-terminal end Gene. 71: 177-186. PMID 2850974 DOI: 10.1016/0378-1119(88)90089-3  0.6
1988 Leibowitz JL, Perlman S, Weinstock G, DeVries JR, Budzilowicz C, Weissemann JM, Weiss SR. Detection of a murine coronavirus nonstructural protein encoded in a downstream open reading frame. Virology. 164: 156-64. PMID 2834866 DOI: 10.1016/0042-6822(88)90631-9  0.6
1987 Weinstock GM. [9] Use of open reading frame expression vectors Methods in Enzymology. 154: 156-163. PMID 3323809 DOI: 10.1016/0076-6879(87)54075-7  0.6
1987 Salles B, Weisemann JM, Weinstock GM. Temporal control of colicin E1 induction Journal of Bacteriology. 169: 5028-5034. PMID 3117771 DOI: 10.1128/Jb.169.11.5028-5034.1987  0.6
1985 Weisemann JM, Weinstock GM. Direct selection of mutations reducing transcription or translation of the recA gene of Escherichia coli with a recA-lacZ protein fusion Journal of Bacteriology. 163: 748-755. PMID 3160689 DOI: 10.1128/Jb.163.2.748-755.1985  0.6
1985 Bremer E, Silhavy TJ, Weinstock GM. Transposable λ placMu bacteriophages for creating lacZ operon fusions and kanamycin resistance insertions in Escherichia coli Journal of Bacteriology. 162: 1092-1099. PMID 2987183  0.6
1985 Weisemann JM, Weinstock GM. Use of transcription and translation signals from the colicin El gene to express DNA sequences in Escherichia coli Gene Analysis Techniques. 2: 9-16. DOI: 10.1016/0735-0651(85)90014-7  0.6
1984 Bremer E, Silhavy TJ, Weisemann JM, Weinstock GM. λ placMu: A transposable derivative of bacteriophage lambda for creating lacZ protein fusions in a single step Journal of Bacteriology. 158: 1084-1093. PMID 6327627 DOI: 10.1128/Jb.158.3.1084-1093.1984  0.6
1984 Weisemann JM, Funk C, Weinstock GM. Measurement of in vivo expression of the recA gene of Escherichia coli by using lacZ gene fusions Journal of Bacteriology. 160: 112-121. PMID 6090405 DOI: 10.1128/Jb.160.1.112-121.1984  0.6
1983 Weinstock GM, Ap Rhys C, Berman ML, Hampar B, Jackson D, Silhavy TJ, Weisemann J, Zweig M. Open reading frame expression vectors: A general method for antigen production in Escherichia coli using protein fusions to β-galactosidase Proceedings of the National Academy of Sciences of the United States of America. 80: 4432-4436. PMID 6308625 DOI: 10.1073/Pnas.80.14.4432  0.6
1983 Weinstock GM, Berman ML, Silhavy TJ. Chimeric genetics with beta-galactosidase Gene Amplification and Analysis. 3: 27-64. PMID 6101029  0.6
1982 Weinstock GM. Enzymatic activities of the RecA protein of Escherichia coli Biochimie. 64: 611-616. PMID 6128035 DOI: 10.1016/S0300-9084(82)80098-9  0.6
1981 McEntee K, Weinstock GM. tif-1 Mutation alters polynucleotide recognition by the recA protein of Escherichia coli Proceedings of the National Academy of Sciences of the United States of America. 78: 6061-6065. PMID 7031642 DOI: 10.1073/Pnas.78.10.6061  0.6
1981 McEntee K, Weinstock GM, Lehman IR. DNA and nucleoside triphosphate binding properties of recA protein from Escherichia coli. Progress in Nucleic Acid Research and Molecular Biology. 26: 265-79. PMID 7025096 DOI: 10.1016/S0079-6603(08)60411-0  0.6
1981 Weinstock GM, McEntee K, Lehman IR. Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Hydrolysis of UTP. The Journal of Biological Chemistry. 256: 8856-8. PMID 7021554  0.6
1981 McEntee K, Weinstock GM, Lehman IR. Binding of the recA protein of Escherichia coli to single- and double-stranded DNA. The Journal of Biological Chemistry. 256: 8835-44. PMID 7021553  0.6
1981 Weinstock GM, McEntee K, Lehman IR. Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Characterization of ATP hydrolysis. The Journal of Biological Chemistry. 256: 8829-34. PMID 7021552  0.6
1981 Weinstock GM, McEntee K. RecA protein-dependent proteolysis of bacteriophage λ repressor. Characterization of the reaction and stimulation by DNA-binding proteins Journal of Biological Chemistry. 256: 10883-10888. PMID 6457045  0.6
1981 Weinstock GM, McEntee K, Lehman IR. Interaction of the recA protein of Escherichia coli with adenosine 5'-O-(3-thiotriphosphate). The Journal of Biological Chemistry. 256: 8850-5. PMID 6455430  0.6
1981 Weinstock GM, McEntee K, Lehman IR. Hydrolysis of nucleoside triphosphates catalyzed by the recA protein of Escherichia coli. Steady state kinetic analysis of ATP hydrolysis. The Journal of Biological Chemistry. 256: 8845-9. PMID 6455429  0.6
1981 Mcentee K, Weinstock GM. 22 The recA Enzyme of Escherichia coli and Recombination Assays Enzymes. 14: 445-470. DOI: 10.1016/S1874-6047(08)60348-0  0.6
1980 Shortle D, Koshland D, Weinstock GM, Botstein D. Segment-directed mutagenesis: Construction in vitro of point mutations limited to a small predetermined region of a circular DNA molecule Proceedings of the National Academy of Sciences of the United States of America. 77: 5375-5379. PMID 6254078 DOI: 10.1073/Pnas.77.9.5375  0.6
1980 Weinstock GM, Botstein D. Genetics of bacteriophage P22. IV. Correlation of genetic and physical map using translocatable drug-resistance elements Virology. 106: 92-99. PMID 6251623 DOI: 10.1016/0042-6822(80)90224-X  0.6
1980 Weinstock GM, Riggs PD, Botstein D. Genetics of bacteriophage P22: III. The late operon Virology. 106: 82-91. PMID 6251622 DOI: 10.1016/0042-6822(80)90223-8  0.6
1980 McEntee K, Weinstock GM, Lehman IR. recA protein-catalyzed strand assimilation: stimulation by Escherichia coli single-stranded DNA-binding protein. Proceedings of the National Academy of Sciences of the United States of America. 77: 857-61. PMID 6244589 DOI: 10.1073/Pnas.77.2.857  0.6
1979 Weinstock GM, Susskind MM, Botstein D. Regional specificity of illegitimate recombination by the translocatable ampicillin-resistance element Tn1 in the genome of phage P22 Genetics. 92: 685-710. PMID 395016  0.6
1979 McEntee K, Weinstock GM, Lehman IR. Initiation of general recombination catalyzed in vitro by the recA protein of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 76: 2615-9. PMID 379861 DOI: 10.1073/Pnas.76.6.2615  0.6
1979 Weinstock GM, McEntee K, Lehman IR. ATP-dependent renaturation of DNA catalyzed by the recA protein of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America. 76: 126-30. PMID 370822 DOI: 10.1073/Pnas.76.1.126  0.6
1979 Weinstock GM, Botstein D. Regional specificity of illegitimate recombination associated with the translocatable ampicillin-resistance element Tn1 Cold Spring Harbor Symposia On Quantitative Biology. 43: 1209-1215. PMID 290441 DOI: 10.1101/Sqb.1979.043.01.137  0.6
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