Sayan D. Pathak, Ph.D. - Publications

2000 University of Washington, Seattle, Seattle, WA 
Biomedical Engineering, Computer Science, Radiology

23 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2010 Thompson CL, Wisor JP, Lee CK, Pathak SD, Gerashchenko D, Smith KA, Fischer SR, Kuan CL, Sunkin SM, Ng LL, Lau C, Hawrylycz M, Jones AR, Kilduff TS, Lein ES. Molecular and anatomical signatures of sleep deprivation in the mouse brain. Frontiers in Neuroscience. 4: 165. PMID 21088695 DOI: 10.3389/fnins.2010.00165  0.32
2010 Morris JA, Royall JJ, Bertagnolli D, Boe AF, Burnell JJ, Byrnes EJ, Copeland C, Desta T, Fischer SR, Goldy J, Glattfelder KJ, Kidney JM, Lemon T, Orta GJ, Parry SE, ... Pathak SD, et al. Divergent and nonuniform gene expression patterns in mouse brain. Proceedings of the National Academy of Sciences of the United States of America. 107: 19049-54. PMID 20956311 DOI: 10.1073/pnas.1003732107  0.32
2010 Bohland JW, Bokil H, Pathak SD, Lee CK, Ng L, Lau C, Kuan C, Hawrylycz M, Mitra PP. Clustering of spatial gene expression patterns in the mouse brain and comparison with classical neuroanatomy. Methods (San Diego, Calif.). 50: 105-12. PMID 19733241 DOI: 10.1016/j.ymeth.2009.09.001  0.32
2008 Thompson CL, Pathak SD, Jeromin A, Ng LL, MacPherson CR, Mortrud MT, Cusick A, Riley ZL, Sunkin SM, Bernard A, Puchalski RB, Gage FH, Jones AR, Bajic VB, Hawrylycz MJ, et al. Genomic anatomy of the hippocampus. Neuron. 60: 1010-21. PMID 19109908 DOI: 10.1016/j.neuron.2008.12.008  0.32
2008 Tutar IB, Gong L, Narayanan S, Pathak SD, Cho PS, Wallner K, Kim Y. Seed-based transrectal ultrasound-fluoroscopy registration method for intraoperative dosimetry analysis of prostate brachytherapy. Medical Physics. 35: 840-8. PMID 18404921 DOI: 10.1118/1.2836422  0.92
2007 Ng L, Pathak SD, Kuan C, Lau C, Dong H, Sodt A, Dang C, Avants B, Yushkevich P, Gee JC, Haynor D, Lein E, Jones A, Hawrylycz M. Neuroinformatics for genome-wide 3D gene expression mapping in the mouse brain Ieee/Acm Transactions On Computational Biology and Bioinformatics. 4: 382-392. PMID 17666758 DOI: 10.1109/TCBB.2007.1035  0.32
2007 Lein ES, Hawrylycz MJ, Ao N, Ayres M, Bensinger A, Bernard A, Boe AF, Boguski MS, Brockway KS, Byrnes EJ, Chen L, Chen L, Chen TM, Chin MC, Chong J, ... ... Pathak SD, et al. Genome-wide atlas of gene expression in the adult mouse brain. Nature. 445: 168-76. PMID 17151600 DOI: 10.1038/nature05453  0.32
2006 Tutar IB, Pathak SD, Gong L, Cho PS, Wallner K, Kim Y. Semiautomatic 3-D prostate segmentation from TRUS images using spherical harmonics. Ieee Transactions On Medical Imaging. 25: 1645-54. PMID 17167999 DOI: 10.1109/TMI.2006.884630  0.92
2005 Pallikarakis N, Tutar IB, Managuli R, Shamdasani V, Cho PS, Pathak SD, Kim Y. Comment on "Tomosynthesis-based localization of radioactive seeds in prostate brachytherapy" [Med. Phys. 30, 3135-3142(2003)] (multiple letters) Medical Physics. 32: 300-301. PMID 15719981 DOI: 10.1118/1.1834831  0.6
2005 Gong L, Ng L, Pathak SD, Tutar I, Cho PS, Haynor DR, Kim Y. Prostate ultrasound image segmentation using level set-based region flow with shape guidance Progress in Biomedical Optics and Imaging - Proceedings of Spie. 5747: 1648-1657. DOI: 10.1117/12.594403  0.56
2004 Gong L, Pathak SD, Haynor DR, Cho PS, Kim Y. Parametric shape modeling using deformable superellipses for prostate segmentation. Ieee Transactions On Medical Imaging. 23: 340-9. PMID 15027527 DOI: 10.1109/TMI.2004.824237  0.92
2004 Tutar IB, Pathak SD, Kim Y. 3D prostate shape modeling from sparsely-acquired 2D images using deformable models Proceedings of Spie - the International Society For Optical Engineering. 5367: 524-532. DOI: 10.1117/12.536809  1
2003 Tutar IB, Managuli R, Shamdasani V, Cho PS, Pathak SD, Kim Y. Tomosynthesis-based localization of radioactive seeds in prostate brachytherapy. Medical Physics. 30: 3135-42. PMID 14713080 DOI: 10.1118/1.1624755  0.92
2003 Pathak SD, Ng L, Wyman B, Fogarasi S, Racki S, Oelund JC, Sparks B, Chalana V. Quantitative image analysis: software systems in drug development trials. Drug Discovery Today. 8: 451-8. PMID 12801797 DOI: 10.1016/S1359-6446(03)02698-9  0.92
2003 Haberman K, Pathak SD, Kim Y. Effects of video digitization in pubic arch interference assessment for prostate brachytherapy. Ieee Transactions On Information Technology in Biomedicine : a Publication of the Ieee Engineering in Medicine and Biology Society. 7: 8-15. PMID 12670014 DOI: 10.1109/TITB.2003.808504  0.92
2003 Gong L, Pathak SD, Haynor DR, Cho PS, Kim Y. Prostate segmentation in ultrasound images with deformable shape priors Proceedings of Spie - the International Society For Optical Engineering. 5029: 535-543. DOI: 10.1117/12.480384  0.56
2002 Gong L, Cho PS, Han BH, Wallner KE, Sutlief SG, Pathak SD, Haynor DR, Kim Y. Ultrasonography and fluoroscopic fusion for prostate brachytherapy dosimetry. International Journal of Radiation Oncology, Biology, Physics. 54: 1322-30. PMID 12459353 DOI: 10.1016/S0360-3016(02)03754-9  0.92
2000 Pathak SD, Chalana V, Haynor DR, Kim Y. Edge-guided boundary delineation in prostate ultrasound images. Ieee Transactions On Medical Imaging. 19: 1211-9. PMID 11212369 DOI: 10.1109/42.897813  0.92
1999 Pathak SD, Chalana V, Haynor DR, Kim Y. Edge guided delineation of the prostate in transrectal ultrasound images Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 2: 1056.  0.76
1998 Pathak SD, Grimm PD, Chalana V, Kim Y. Pubic arch detection in transrectal ultrasound guided prostate cancer therapy. Ieee Transactions On Medical Imaging. 17: 762-71. PMID 9874300 DOI: 10.1109/42.736032  0.92
1998 Aarnink RG, Pathak SD, de la Rosette JJ, Debruyne FM, Kim Y, Wijkstra H. Edge detection in prostatic ultrasound images using integrated edge maps. Ultrasonics. 36: 635-42. PMID 9651593  0.92
1998 Managuli RA, Basoglu C, Pathak SD, Kim Y. Fast convolution on a programmable mediaprocessor and application in unsharp masking Proceedings of Spie - the International Society For Optical Engineering. 3335: 675-685. DOI: 10.1117/12.312547  0.6
1997 Pathak SD, Chalana V, Kim Y. Interactive automatic fetal head measurements from ultrasound images using multimedia computer technology. Ultrasound in Medicine & Biology. 23: 665-73. PMID 9253814 DOI: 10.1016/S0301-5629(97)00009-4  0.92
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