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Sayan D. Pathak, Ph.D. - Publications

Affiliations: 
2000 University of Washington, Seattle, Seattle, WA 
Area:
Biomedical Engineering, Computer Science, Radiology
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28 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2010 Thompson CL, Wisor JP, Lee CK, Pathak SD, Gerashchenko D, Smith KA, Fischer SR, Kuan CL, Sunkin SM, Ng LL, Lau C, Hawrylycz M, Jones AR, Kilduff TS, Lein ES. Molecular and anatomical signatures of sleep deprivation in the mouse brain. Frontiers in Neuroscience. 4: 165. PMID 21088695 DOI: 10.3389/Fnins.2010.00165  0.416
2010 Bohland JW, Bokil H, Pathak SD, Lee CK, Ng L, Lau C, Kuan C, Hawrylycz M, Mitra PP. Clustering of spatial gene expression patterns in the mouse brain and comparison with classical neuroanatomy. Methods (San Diego, Calif.). 50: 105-12. PMID 19733241 DOI: 10.1016/j.ymeth.2009.09.001  0.39
2008 Tutar IB, Gong L, Narayanan S, Pathak SD, Cho PS, Wallner K, Kim Y. Seed-based transrectal ultrasound-fluoroscopy registration method for intraoperative dosimetry analysis of prostate brachytherapy. Medical Physics. 35: 840-8. PMID 18404921 DOI: 10.1118/1.2836422  0.831
2008 Lau C, Ng L, Thompson C, Pathak S, Kuan L, Jones A, Hawrylycz M. Exploration and visualization of gene expression with neuroanatomy in the adult mouse brain Bmc Bioinformatics. 9. PMID 18366675 DOI: 10.1186/1471-2105-9-153  0.434
2007 Lein ES, Hawrylycz MJ, Ao N, Ayres M, Bensinger A, Bernard A, Boe AF, Boguski MS, Brockway KS, Byrnes EJ, Chen L, Chen L, Chen TM, Chin MC, Chong J, ... ... Pathak SD, et al. Genome-wide atlas of gene expression in the adult mouse brain. Nature. 445: 168-76. PMID 17151600 DOI: 10.1038/Nature05453  0.454
2007 Cho P, Tutar I, Narayanan S, Lam S, Gong L, Pathak S, Kim Y, Wallner K. SU-FF-T-73: An Intra-Operative Dosimetry System for Prostate Brachytherapy Using Dual-Modality Imaging Medical Physics. 34: 2417-2417. DOI: 10.1118/1.2760724  0.819
2006 Tutar IB, Pathak SD, Gong L, Cho PS, Wallner K, Kim Y. Semiautomatic 3-D prostate segmentation from TRUS images using spherical harmonics. Ieee Transactions On Medical Imaging. 25: 1645-54. PMID 17167999 DOI: 10.1109/Tmi.2006.884630  0.841
2006 Gong L, Pathak S, Alessio A, Kinahan P. Automatic arm removal in PET and CT images for deformable registration. Computerized Medical Imaging and Graphics : the Official Journal of the Computerized Medical Imaging Society. 30: 469-77. PMID 17084065 DOI: 10.1016/J.Compmedimag.2006.09.013  0.334
2005 Pallikarakis N, Tutar IB, Managuli R, Shamdasani V, Cho PS, Pathak SD, Kim Y. Comment on "Tomosynthesis-based localization of radioactive seeds in prostate brachytherapy" [Med. Phys. 30, 3135-3142(2003)] (multiple letters) Medical Physics. 32: 300-301. PMID 15719981 DOI: 10.1118/1.1834831  0.817
2005 Tutar IB, Managuli R, Shamdasani V, Cho PS, Pathak SD, Kim Y. Reply to “Comment on ‘Tomosynthesis-based localization of radioactive seeds in prostate brachytherapy’ ” [Med. Phys. 32, 300 (2005)] Medical Physics. 32: 301-301. DOI: 10.1118/1.1834833  0.767
2005 Gong L, Ng L, Pathak SD, Tutar I, Cho PS, Haynor DR, Kim Y. Prostate ultrasound image segmentation using level set-based region flow with shape guidance Progress in Biomedical Optics and Imaging - Proceedings of Spie. 5747: 1648-1657. DOI: 10.1117/12.594403  0.812
2004 Gong L, Pathak SD, Haynor DR, Cho PS, Kim Y. Parametric shape modeling using deformable superellipses for prostate segmentation. Ieee Transactions On Medical Imaging. 23: 340-9. PMID 15027527 DOI: 10.1109/Tmi.2004.824237  0.727
2004 Tutar IB, Pathak SD, Kim Y. 3D prostate shape modeling from sparsely-acquired 2D images using deformable models Proceedings of Spie - the International Society For Optical Engineering. 5367: 524-532. DOI: 10.1117/12.536809  0.837
2003 Tutar IB, Managuli R, Shamdasani V, Cho PS, Pathak SD, Kim Y. Tomosynthesis-based localization of radioactive seeds in prostate brachytherapy. Medical Physics. 30: 3135-42. PMID 14713080 DOI: 10.1118/1.1624755  0.768
2003 Pathak SD, Ng L, Wyman B, Fogarasi S, Racki S, Oelund JC, Sparks B, Chalana V. Quantitative image analysis: software systems in drug development trials. Drug Discovery Today. 8: 451-8. PMID 12801797 DOI: 10.1016/S1359-6446(03)02698-9  0.351
2003 Haberman K, Pathak SD, Kim Y. Effects of video digitization in pubic arch interference assessment for prostate brachytherapy. Ieee Transactions On Information Technology in Biomedicine : a Publication of the Ieee Engineering in Medicine and Biology Society. 7: 8-15. PMID 12670014 DOI: 10.1109/TITB.2003.808504  0.607
2003 Gong L, Pathak SD, Haynor DR, Cho PS, Kim Y. Prostate segmentation in ultrasound images with deformable shape priors Proceedings of Spie - the International Society For Optical Engineering. 5029: 535-543. DOI: 10.1117/12.480384  0.694
2002 Gong L, Cho PS, Han BH, Wallner KE, Sutlief SG, Pathak SD, Haynor DR, Kim Y. Ultrasonography and fluoroscopic fusion for prostate brachytherapy dosimetry. International Journal of Radiation Oncology, Biology, Physics. 54: 1322-30. PMID 12459353 DOI: 10.1016/S0360-3016(02)03754-9  0.744
2002 Gong L, Cho P, Han B, Pathak SD, Haynor D, Wallner K, Sutlief S, Kim Y. Registration of prostate brachytherapy seeds with prostate anatomy for improved patient dosimetry Proceedings of Spie - the International Society For Optical Engineering. 4681: 567-575. DOI: 10.1117/12.466961  0.747
2001 Gong L, Pathak SD, Kim Y. Selective contrast enhancement of prostate ultrasound images using sticks with high-level information Proceedings of Spie - the International Society For Optical Engineering. 4319: 615-622. DOI: 10.1117/12.428107  0.712
2000 Pathak SD, Chalana V, Haynor DR, Kim Y. Edge-guided boundary delineation in prostate ultrasound images. Ieee Transactions On Medical Imaging. 19: 1211-9. PMID 11212369 DOI: 10.1109/42.897813  0.741
1999 Pathak SD, Chalana V, Haynor DR, Kim Y. Edge guided delineation of the prostate in transrectal ultrasound images Annual International Conference of the Ieee Engineering in Medicine and Biology - Proceedings. 2: 1056.  0.609
1998 Pathak SD, Grimm PD, Chalana V, Kim Y. Pubic arch detection in transrectal ultrasound guided prostate cancer therapy. Ieee Transactions On Medical Imaging. 17: 762-71. PMID 9874300 DOI: 10.1109/42.736032  0.77
1998 Aarnink RG, Pathak SD, de la Rosette JJ, Debruyne FM, Kim Y, Wijkstra H. Edge detection in prostatic ultrasound images using integrated edge maps. Ultrasonics. 36: 635-42. PMID 9651593 DOI: 10.1016/S0041-624X(97)00126-1  0.691
1998 Pathak SD, Aarnink RG, De la Rosette JJMCH, Chalana V, Wijkstra H, Haynor DR, Debruyne FMJ, Kim Y. Quantitative three-dimensional transrectal ultrasound (TRUS) for prostate imaging Proceedings of Spie - the International Society For Optical Engineering. 3335: 83-92. DOI: 10.1117/12.312551  0.553
1998 Managuli RA, Basoglu C, Pathak SD, Kim Y. Fast convolution on a programmable mediaprocessor and application in unsharp masking Proceedings of Spie - the International Society For Optical Engineering. 3335: 675-685. DOI: 10.1117/12.312547  0.687
1997 Pathak SD, Chalana V, Kim Y. Interactive automatic fetal head measurements from ultrasound images using multimedia computer technology. Ultrasound in Medicine & Biology. 23: 665-73. PMID 9253814 DOI: 10.1016/S0301-5629(97)00009-4  0.459
1996 Pathak SD, Kim Y, Kim J. Efficient implementation of facet models on a multimedia system Optical Engineering. 35: 1739-1745. DOI: 10.1117/1.600749  0.516
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