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Jeremy Goecks, Ph.D. - Publications

Affiliations: 
2009 Georgia Institute of Technology, Atlanta, GA 
Area:
Computer Science, Information Science
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21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Jalili V, Afgan E, Gu Q, Clements D, Blankenberg D, Goecks J, Taylor J, Nekrutenko A. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2020 update. Nucleic Acids Research. PMID 32585001 DOI: 10.1093/Nar/Gkaa554  0.356
2020 Sargent L, Liu Y, Leung W, Mortimer NT, Lopatto D, Goecks J, Elgin SCR. G-OnRamp: Generating genome browsers to facilitate undergraduate-driven collaborative genome annotation. Plos Computational Biology. 16: e1007863. PMID 32497138 DOI: 10.1371/Journal.Pcbi.1007863  0.308
2019 Jalili V, Afgan E, Taylor J, Goecks J. Cloud Bursting Galaxy: Federated Identity and Access Management. Bioinformatics (Oxford, England). PMID 31197310 DOI: 10.1093/Bioinformatics/Btz472  0.389
2019 Liu Y, Sargent L, Leung W, Elgin SCR, Goecks J. G-OnRamp: A Galaxy-based platform for collaborative annotation of eukaryotic genomes. Bioinformatics (Oxford, England). PMID 31070714 DOI: 10.1093/Bioinformatics/Btz309  0.319
2019 Jalili V, Matteucci M, Goecks J, Deldjoo Y, Ceri S. Next Generation Indexing for Genomic Intervals Ieee Transactions On Knowledge and Data Engineering. 31: 2008-2021. DOI: 10.1109/Tkde.2018.2871031  0.323
2018 Alterovitz G, Dean D, Goble C, Crusoe MR, Soiland-Reyes S, Bell A, Hayes A, Suresh A, Purkayastha A, King CH, Taylor D, Johanson E, Thompson EE, Donaldson E, Morizono H, ... ... Goecks J, et al. Enabling precision medicine via standard communication of HTS provenance, analysis, and results. Plos Biology. 16: e3000099. PMID 30596645 DOI: 10.1371/Journal.Pbio.3000099  0.363
2018 Grüning B, Chilton J, Köster J, Dale R, Soranzo N, van den Beek M, Goecks J, Backofen R, Nekrutenko A, Taylor J. Practical Computational Reproducibility in the Life Sciences. Cell Systems. 6: 631-635. PMID 29953862 DOI: 10.1016/J.Cels.2018.03.014  0.378
2018 Afgan E, Baker D, Batut B, van den Beek M, Bouvier D, Cech M, Chilton J, Clements D, Coraor N, Grüning BA, Guerler A, Hillman-Jackson J, Hiltemann S, Jalili V, Rasche H, ... ... Goecks J, et al. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update. Nucleic Acids Research. PMID 29790989 DOI: 10.1093/Nar/Gky379  0.35
2018 Nekrutenko A, Team G, Goecks J, Taylor J, Blankenberg D. Biology needs evolutionary software tools: Let's build them right. Molecular Biology and Evolution. PMID 29688462 DOI: 10.1093/Molbev/Msy084  0.35
2016 Simonyan V, Goecks J, Mazumder R. Bio-compute objects - a step towards evaluation and validation of bio-medical scientific computations. Pda Journal of Pharmaceutical Science and Technology. PMID 27974626 DOI: 10.5731/Pdajpst.2016.006734  0.339
2016 Afgan E, Baker D, van den Beek M, Blankenberg D, Bouvier D, Čech M, Chilton J, Clements D, Coraor N, Eberhard C, Grüning B, Guerler A, Hillman-Jackson J, Von Kuster G, Rasche E, ... ... Goecks J, et al. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2016 update. Nucleic Acids Research. PMID 27137889 DOI: 10.1093/Nar/Gkw343  0.429
2016 Marenco R, Leung W, Elgin SCR, Goecks J. Engaging biologists with big data using interactive genome annotation F1000research. 5. DOI: 10.7490/F1000Research.1112404.1  0.38
2015 Budd A, Corpas M, Brazas MD, Fuller JC, Goecks J, Mulder NJ, Michaut M, Ouellette BF, Pawlik A, Blomberg N. A quick guide for building a successful bioinformatics community. Plos Computational Biology. 11: e1003972. PMID 25654371 DOI: 10.1371/Journal.Pcbi.1003972  0.3
2015 Harris NL, Cock PJ, Chapman BA, Goecks J, Hotz HR, Lapp H. The Bioinformatics Open Source Conference (BOSC) 2013. Bioinformatics (Oxford, England). 31: 299-300. PMID 25024288 DOI: 10.1093/Bioinformatics/Btu413  0.377
2013 Goecks J, Eberhard C, Too T, Nekrutenko A, Taylor J. Web-based visual analysis for high-throughput genomics. Bmc Genomics. 14: 397. PMID 23758618 DOI: 10.1186/1471-2164-14-397  0.313
2010 Goecks J, Nekrutenko A, Taylor J, Afgan E, Ananda G, Baker D, Blankenberg D, Chakrabarty R, Coraor N, Von Kuster G, Lazarus R, Li K, Vincent K. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences Genome Biology. 11. PMID 20738864 DOI: 10.1186/Gb-2010-11-8-R86  0.404
2009 Goecks J, Edwards WK, Mynatt ED. Challenges in supporting end-user privacy and security management with social navigation Soups 2009 - Proceedings of the 5th Symposium On Usable Privacy and Security. DOI: 10.1145/1572532.1572539  0.533
2008 Goecks J, Voida A, Voida S, Mynatt ED. Charitable technologies: Opportunities for collaborative computing in nonprofit fundraising Proceedings of the Acm Conference On Computer Supported Cooperative Work, Cscw. 689-698. DOI: 10.1145/1460563.1460669  0.582
2005 Goecks J, Mynatt ED. Supporting privacy management via community experience and expertise Proceedings of the 2nd Communities and Technologies Conference, C and T 2005. 397-417. DOI: 10.1007/1-4020-3591-8-21  0.535
2004 Goecks J, Mynatt ED. Leveraging social networks for information sharing Proceedings of the Acm Conference On Computer Supported Cooperative Work, Cscw. 328-331.  0.537
2002 Tullio J, Goecks J, Mynatt ED, Nguyen DH. Augmenting shared personal calendars Uist (User Interface Software and Technology): Proceedings of the Acm Symposium. 11-20.  0.548
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