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Sungroh Yoon, Ph.D. - Publications

Affiliations: 
2006 Stanford University, Palo Alto, CA 
Area:
Electronics and Electrical Engineering, Computer Science
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44 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Kim HK, Yu G, Park J, Min S, Lee S, Yoon S, Kim HH. Predicting the efficiency of prime editing guide RNAs in human cells. Nature Biotechnology. PMID 32958957 DOI: 10.1038/S41587-020-0677-Y  0.316
2020 Bae H, Min S, Choi HS, Yoon S. DNA Privacy: Analyzing Malicious DNA Sequences using Deep Neural Networks. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 32809941 DOI: 10.1109/Tcbb.2020.3017191  0.313
2020 Jo J, Kwak B, Choi HS, Yoon S. The Message Passing Neural Networks for Chemical Property Prediction on SMILES. Methods (San Diego, Calif.). PMID 32445695 DOI: 10.1016/J.Ymeth.2020.05.009  0.302
2019 Kim HK, Kim Y, Lee S, Min S, Bae JY, Choi JW, Park J, Jung D, Yoon S, Kim HH. SpCas9 activity prediction by DeepSpCas9, a deep learning-based model with high generalization performance. Science Advances. 5: eaax9249. PMID 31723604 DOI: 10.1126/Sciadv.Aax9249  0.309
2019 Baek S, Jang J, Yoon S. End-to-End Blood Pressure Prediction via Fully Convolutional Networks Ieee Access. 7: 185458-185468. DOI: 10.1109/Access.2019.2960844  0.304
2019 Hwang U, Park J, Jang H, Yoon S, Cho NI. PuVAE: A Variational Autoencoder to Purify Adversarial Examples Ieee Access. 7: 126582-126593. DOI: 10.1109/Access.2019.2939352  0.311
2018 Kwon S, Yoon S. End-to-end Representation Learning for Chemical-Chemical Interaction Prediction. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 30106687 DOI: 10.1109/Tcbb.2018.2864149  0.311
2018 Lee S, Kim H, Park J, Jang J, Jeong C, Yoon S. TensorLightning: A Traffic-Efficient Distributed Deep Learning on Commodity Spark Clusters Ieee Access. 6: 27671-27680. DOI: 10.1109/Access.2018.2842103  0.322
2017 Jeon Y, Yoo J, Lee J, Yoon S. NC-Link: A New Linkage Method for Efficient Hierarchical Clustering of Large-Scale Data Ieee Access. 5: 5594-5608. DOI: 10.1109/Access.2017.2690987  0.361
2017 Lee T, Won J, Lim J, Yoon S. Large-Scale Structured Sparsity via Parallel Fused Lasso on Multiple GPUs Journal of Computational and Graphical Statistics. 26: 851-864. DOI: 10.1080/10618600.2017.1328363  0.317
2017 Kim J, You T, Seo H, Yoon S, Gaudiot J, Chung E. An effective pre-store/pre-load method exploiting intra-request idle time of NAND flash-based storage devices Microprocessors and Microsystems. 50: 222-236. DOI: 10.1016/J.Micpro.2017.03.007  0.548
2016 Park S, Choi HS, Lee B, Chun J, Won JH, Yoon S. hc-OTU: A Fast and Accurate Method for Clustering Operational Taxonomic Unit based on Homopolymer Compaction. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. PMID 26930691 DOI: 10.1109/Tcbb.2016.2535326  0.359
2015 Lee S, Min H, Yoon S. Will solid-state drives accelerate your bioinformatics? In-depth profiling, performance analysis and beyond. Briefings in Bioinformatics. PMID 26330577 DOI: 10.1093/Bib/Bbv073  0.332
2015 Kim JY, Park SH, Seo H, Song KW, Yoon S, Chung EY. NAND Flash Memory With Multiple Page Sizes for High-Performance Storage Devices Ieee Transactions On Very Large Scale Integration (Vlsi) Systems. DOI: 10.1109/Tvlsi.2015.2409055  0.533
2015 Jeon Y, Yoon S. Multi-Threaded Hierarchical Clustering by Parallel Nearest-Neighbor Chaining Ieee Transactions On Parallel and Distributed Systems. 26: 2534-2548. DOI: 10.1109/Tpds.2014.2355205  0.366
2014 Yu S, Kim J, Min H, Yoon S. Ensemble learning can significantly improve human microRNA target prediction. Methods (San Diego, Calif.). 69: 220-9. PMID 25088780 DOI: 10.1016/J.Ymeth.2014.07.008  0.326
2014 Yu S, Yoon S, Chung EY, Lee HJ. Design of a bitmap-based QoS-aware memory controller for a packet memory Ieice Electronics Express. 11. DOI: 10.1587/Elex.11.20130983  0.477
2014 Seo B, Kang S, Choi J, Cha J, Won Y, Yoon S. IO Workload Characterization Revisited: A Data-Mining Approach Ieee Transactions On Computers. 63: 3026-3038. DOI: 10.1109/Tc.2013.187  0.317
2013 Jeon Y, Jung E, Min H, Chung EY, Yoon S. GPU-based acceleration of an RNA tertiary structure prediction algorithm. Computers in Biology and Medicine. 43: 1011-22. PMID 23816173 DOI: 10.1016/J.Compbiomed.2013.05.007  0.552
2013 Kim H, Cordero P, Das R, Yoon S. HiTRACE-Web: an online tool for robust analysis of high-throughput capillary electrophoresis. Nucleic Acids Research. 41: W492-8. PMID 23761448 DOI: 10.1093/Nar/Gkt501  0.311
2012 Lee JB, Kim MJ, Yoon S, Chung EY. Application-support particle filter for dynamic voltage scaling of multimedia applications Ieee Transactions On Computers. 61: 1256-1269. DOI: 10.1109/Tc.2011.148  0.541
2011 Kim J, Kim H, Min H, Yoon S. Constructing accurate contact maps for hydroxyl-radical-cleavage-based high-throughput RNA structure inference. Ieee Transactions On Bio-Medical Engineering. 58: 1347-55. PMID 21292588 DOI: 10.1109/Tbme.2011.2109716  0.335
2011 Chun W, Yoon S, Hong S. Energy-Aware Interconnect Resource Reduction Through Buffer Access Manipulation for Data-Centric Applications Ieee Transactions On Very Large Scale Integration (Vlsi) Systems. 19: 818-831. DOI: 10.1109/Tvlsi.2010.2042087  0.307
2011 Kim C, Yoon S, Kim D. Fast sort of floating-point data for data engineering Advances in Engineering Software. 42: 50-54. DOI: 10.1016/J.Advengsoft.2010.10.017  0.35
2010 Min H, Yu S, Lee T, Yoon S. Support vector machine based classification of 3-dimensional protein physicochemical environments for automated function annotation. Archives of Pharmacal Research. 33: 1451-9. PMID 20945145 DOI: 10.1007/S12272-010-0920-Z  0.301
2010 Lee T, Min H, Kim SJ, Yoon S. Application of maximin correlation analysis to classifying protein environments for function prediction. Biochemical and Biophysical Research Communications. 400: 219-24. PMID 20719237 DOI: 10.1016/J.Bbrc.2010.08.042  0.322
2010 Min H, Yoon S. Got target? Computational methods for microRNA target prediction and their extension. Experimental & Molecular Medicine. 42: 233-44. PMID 20177143 DOI: 10.3858/Emm.2010.42.4.032  0.318
2010 Kim D, Bang K, Ha SH, Yoon S, Chung EY. Architecture exploration of high-performance pcs with a solid-state disk Ieee Transactions On Computers. 59: 878-890. DOI: 10.1109/Tc.2010.66  0.533
2009 Kim J, Yu S, Shim B, Kim H, Min H, Chung EY, Das R, Yoon S. A robust peak detection method for RNA structure inference by high-throughput contact mapping. Bioinformatics (Oxford, England). 25: 1137-44. PMID 19246511 DOI: 10.1093/Bioinformatics/Btp110  0.559
2009 Lee T, Kim SJ, Chung EY, Yoon S. K-maximin clustering: A maximin correlation approach to partition-based clustering Ieice Electronics Express. 6: 1205-1211. DOI: 10.1587/Elex.6.1205  0.538
2009 Bang SY, Bang K, Yoon S, Chung EY. Run-time adaptive workload estimation for dynamic voltage scaling Ieee Transactions On Computer-Aided Design of Integrated Circuits and Systems. 28: 1334-1347. DOI: 10.1109/Tcad.2009.2024706  0.544
2009 Kim MJ, Chung EY, Yoon S. High-speed post-layout logic simulation using quasi-static clock event evaluation Ieee Transactions On Computer-Aided Design of Integrated Circuits and Systems. 28: 1274-1278. DOI: 10.1109/Tcad.2009.2020716  0.528
2008 Ficarra E, De Micheli G, Yoon S, Benini L, Macii E. Joint co-clustering: Co-clustering of genomic and clinical bioimaging data Computers & Mathematics With Applications. 55: 938-949. DOI: 10.1016/J.Camwa.2006.12.102  0.337
2007 Yoon S, Benini L, De Micheli G. Co-clustering: a versatile tool for data analysis in biomedical informatics. Ieee Transactions On Information Technology in Biomedicine : a Publication of the Ieee Engineering in Medicine and Biology Society. 11: 493-4. PMID 17674632 DOI: 10.1109/TITB.2007.897575  0.629
2007 Yoon S, Ebert JC, Chung EY, De Micheli G, Altman RB. Clustering protein environments for function prediction: finding PROSITE motifs in 3D. Bmc Bioinformatics. 8: S10. PMID 17570144 DOI: 10.1186/1471-2105-8-S4-S10  0.697
2006 Yoon S, Garg A, Park HS, Park WY, De Micheli G. Exploiting binary abstractions in deciphering gene interactions. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 5858-63. PMID 17947172 DOI: 10.1109/IEMBS.2006.260194  0.63
2006 Yoon S, De Micheli G. Computational identification of microRNAs and their targets. Birth Defects Research. Part C, Embryo Today : Reviews. 78: 118-28. PMID 16847881 DOI: 10.1002/Bdrc.20067  0.643
2006 Yoon S, Benini L, DeMicheli G. A Pattern-Mining Method for High-Throughput Lab-on-a-Chip Data Analysis Ieee Transactions On Computer-Aided Design of Integrated Circuits and Systems. 25: 358-377. DOI: 10.1109/Tcad.2005.855960  0.34
2006 Son CI, Yoon S, Chung SW, Park CI, Chung EY. Variability-insensitive scheme for NAND flash memory interfaces Electronics Letters. 42: 1335-1337. DOI: 10.1049/El:20062239  0.513
2005 Yoon S, Benini L, De Micheli G. Finding co-clusters of genes and clinical parameters. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 1: 906-12. PMID 17282331 DOI: 10.1109/IEMBS.2005.1616562  0.636
2005 Yoon S, De Micheli G. Prediction and Analysis of Human microRNA Regulatory Modules. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 5: 4799-802. PMID 17281315 DOI: 10.1109/IEMBS.2005.1615545  0.634
2005 Yoon S, Nardini C, Benini L, De Micheli G. Discovering coherent biclusters from gene expression data using zero-suppressed binary decision diagrams. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 2: 339-54. PMID 17044171 DOI: 10.1109/Tcbb.2005.55  0.673
2005 Yoon S, De Micheli G. Prediction of regulatory modules comprising microRNAs and target genes. Bioinformatics (Oxford, England). 21: ii93-100. PMID 16204133 DOI: 10.1093/Bioinformatics/Bti1116  0.652
2004 Yoon S, De Micheli G. An application of zero-suppressed binary decision diagrams to clustering analysis of DNA microarray data. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 4: 2925-8. PMID 17270890 DOI: 10.1109/IEMBS.2004.1403831  0.652
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