Philip R. Payne, Ph.D. - Publications

Affiliations: 
2007 Columbia University, New York, NY 
Area:
Information Science, Computer Science

70 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Madhavan S, Bastarache L, Brown JS, Butte AJ, Dorr DA, Embi PJ, Friedman CP, Johnson KB, Moore JH, Kohane IS, Payne PRO, Tenenbaum JD, Weiner MG, Wilcox AB, Ohno-Machado L. Use of electronic health records to support a public health response to the COVID-19 pandemic in the United States: a perspective from 15 academic medical centers. Journal of the American Medical Informatics Association : Jamia. PMID 33260207 DOI: 10.1093/jamia/ocaa287  0.32
2018 Payne PRO, Bernstam EV, Starren JB. Biomedical informatics meets data science: current state and future directions for interaction. Jamia Open. 1: 136-141. PMID 31984327 DOI: 10.1093/jamiaopen/ooy032  0.96
2016 Foraker RE, Shoben AB, Kelley MM, Lai AM, Lopetegui MA, Jackson RD, Langan MA, Payne PR. Electronic health record-based assessment of cardiovascular health: The stroke prevention in healthcare delivery environments (SPHERE) study. Preventive Medicine Reports. 4: 303-8. PMID 27486559 DOI: 10.1016/J.Pmedr.2016.07.006  0.96
2016 Payne PR, Lussier Y, Foraker RE, Embi PJ. Rethinking the role and impact of health information technology: informatics as an interventional discipline. Bmc Medical Informatics and Decision Making. 16: 40. PMID 27025583 DOI: 10.1186/S12911-016-0278-3  0.32
2015 Campbell AR, Regan K, Bhave N, Pattanayak A, Parihar R, Stiff AR, Trikha P, Scoville SD, Liyanarachchi S, Kondadasula SV, Lele O, Davuluri R, Payne PR, Carson WE. Gene expression profiling of the human natural killer cell response to Fc receptor activation: unique enhancement in the presence of interleukin-12. Bmc Medical Genomics. 8: 66. PMID 26470881 DOI: 10.1186/S12920-015-0142-9  0.96
2015 Raje S, Kite B, Ramanathan J, Payne P. Real-time Data Fusion Platforms: The Need of Multi-dimensional Data-driven Research in Biomedical Informatics. Studies in Health Technology and Informatics. 216: 1107. PMID 26262406 DOI: 10.3233/978-1-61499-564-7-1107  0.96
2015 Regan K, Raje S, Saravanamuthu C, Payne PRO. Conceptual Knowledge Discovery in Databases for Drug Combinations Predictions in Malignant Melanoma Studies in Health Technology and Informatics. 216: 663-667. DOI: 10.3233/978-1-61499-564-7-663  0.96
2015 Motiwala T, Kite B, Regan K, Gascon GM, Payne PRO. Domain Analysis of Integrated Data to Reduce Cost Associated with Liver Disease Studies in Health Technology and Informatics. 216: 414-418. DOI: 10.3233/978-1-61499-564-7-414  0.96
2015 Kothari CR, Payne PRO. A Metadata based Knowledge Discovery Methodology for Seeding Translational Research Studies in Health Technology and Informatics. 216: 1071. DOI: 10.3233/978-1-61499-564-7-1071  0.96
2015 Abrams ZB, Peabody AL, Heerema NA, Payne PRO. Text Mining and Data Modeling of Karyotypes to aid in Drug Repurposing Efforts Studies in Health Technology and Informatics. 216: 1037. DOI: 10.3233/978-1-61499-564-7-1037  0.96
2015 Williams MS, Ritchie MD, Payne PRO. Interdisciplinary training to build an informatics workforce for precision medicine Applied and Translational Genomics. DOI: 10.1016/j.atg.2015.07.003  0.96
2015 Payne PRO. In silico hypothesis discovery Translational Informatics: Realizing the Promise of Knowledge-Driven Healthcare. 129-151. DOI: 10.1007/978-1-4471-4646-9_8  0.96
2015 Payne PRO, Embi PJ. Driving clinical and translational research using biomedical informatics Translational Informatics: Realizing the Promise of Knowledge-Driven Healthcare. 99-117. DOI: 10.1007/978-1-4471-4646-9_6  0.96
2015 Payne PRO. A prototype of translational informatics in action Translational Informatics: Realizing the Promise of Knowledge-Driven Healthcare. 21-31. DOI: 10.1007/978-1-4471-4646-9_2  0.96
2015 Embi PJ, Payne PRO. Future directions for translational informatics Translational Informatics: Realizing the Promise of Knowledge-Driven Healthcare. 165-178. DOI: 10.1007/978-1-4471-4646-9_10  0.96
2015 Payne PRO, Embi PJ. An introduction to translational informatics and the future of knowledge-driven healthcare Translational Informatics: Realizing the Promise of Knowledge-Driven Healthcare. 3-19. DOI: 10.1007/978-1-4471-4646-9_1  0.96
2014 Embi PJ, Payne PR. Advancing methodologies in Clinical Research Informatics (CRI): foundational work for a maturing field. Journal of Biomedical Informatics. 52: 1-3. PMID 25484113 DOI: 10.1016/j.jbi.2014.10.007  0.96
2014 Weng C, Payne PR, Velez M, Johnson SB, Bakken S. Towards symbiosis in knowledge representation and natural language processing for structuring clinical practice guidelines. Studies in Health Technology and Informatics. 201: 461-9. PMID 24943582 DOI: 10.3233/978-1-61499-415-2-461  0.96
2014 Roth C, Foraker RE, Payne PR, Embi PJ. Community-level determinants of obesity: harnessing the power of electronic health records for retrospective data analysis. Bmc Medical Informatics and Decision Making. 14: 36. PMID 24886134 DOI: 10.1186/1472-6947-14-36  0.96
2014 Foraker RE, Shoben AB, Lopetegui MA, Lai AM, Payne PR, Kelley M, Roth C, Tindle H, Schreiner A, Jackson RD. Assessment of Life's Simple 7 in the primary care setting: the Stroke Prevention in Healthcare Delivery EnviRonmEnts (SPHERE) study. Contemporary Clinical Trials. 38: 182-9. PMID 24721482 DOI: 10.1016/J.Cct.2014.03.007  0.96
2014 Lopetegui M, Yen PY, Lai A, Jeffries J, Embi P, Payne P. Time motion studies in healthcare: what are we talking about? Journal of Biomedical Informatics. 49: 292-9. PMID 24607863 DOI: 10.1016/j.jbi.2014.02.017  0.96
2013 Hersh WR, Cimino J, Payne PR, Embi P, Logan J, Weiner M, Bernstam EV, Lehmann H, Hripcsak G, Hartzog T, Saltz J. Recommendations for the use of operational electronic health record data in comparative effectiveness research. Egems (Washington, Dc). 1: 1018. PMID 25848563 DOI: 10.13063/2327-9214.1018  0.44
2013 Lopetegui MA, Bai S, Yen PY, Lai A, Embi P, Payne PR. Inter-observer reliability assessments in time motion studies: the foundation for meaningful clinical workflow analysis. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2013: 889-96. PMID 24551381  0.96
2013 Embi PJ, Payne PR. Evidence generating medicine: redefining the research-practice relationship to complete the evidence cycle. Medical Care. 51: S87-91. PMID 23793052 DOI: 10.1097/MLR.0b013e31829b1d66  0.96
2013 Embi PJ, Hebert C, Gordillo G, Kelleher K, Payne PR. Knowledge management and informatics considerations for comparative effectiveness research: a case-driven exploration. Medical Care. 51: S38-44. PMID 23793050 DOI: 10.1097/MLR.0b013e31829b1de1  0.96
2013 Hersh WR, Weiner MG, Embi PJ, Logan JR, Payne PR, Bernstam EV, Lehmann HP, Hripcsak G, Hartzog TH, Cimino JJ, Saltz JH. Caveats for the use of operational electronic health record data in comparative effectiveness research. Medical Care. 51: S30-7. PMID 23774517 DOI: 10.1097/Mlr.0B013E31829B1Dbd  0.96
2013 Payne PR, Pressler TR, Sarkar IN, Lussier Y. People, organizational, and leadership factors impacting informatics support for clinical and translational research. Bmc Medical Informatics and Decision Making. 13: 20. PMID 23388243 DOI: 10.1186/1472-6947-13-20  0.96
2012 Lopetegui M, Yen PY, Lai AM, Embi PJ, Payne PR. Time Capture Tool (TimeCaT): development of a comprehensive application to support data capture for Time Motion Studies. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 2012: 596-605. PMID 23304332  0.96
2012 Payne PR. Chapter 1: Biomedical knowledge integration. Plos Computational Biology. 8: e1002826. PMID 23300416 DOI: 10.1371/journal.pcbi.1002826  0.96
2012 Payne PR, Jackson RD, Best TM, Borlawsky TB, Lai AM, James S, Gurcan MN. Applying knowledge-anchored hypothesis discovery methods to advance clinical and translational research: the OAMiner project. Journal of the American Medical Informatics Association : Jamia. 19: 1110-4. PMID 22647689 DOI: 10.1136/amiajnl-2011-000736  0.96
2012 Pressler TR, Yen PY, Ding J, Liu J, Embi PJ, Payne PR. Computational challenges and human factors influencing the design and use of clinical research participant eligibility pre-screening tools. Bmc Medical Informatics and Decision Making. 12: 47. PMID 22646313 DOI: 10.1186/1472-6947-12-47  0.96
2012 Xiang Y, Lu K, James SL, Borlawsky TB, Huang K, Payne PR. k-Neighborhood decentralization: a comprehensive solution to index the UMLS for large scale knowledge discovery. Journal of Biomedical Informatics. 45: 323-36. PMID 22154838 DOI: 10.1016/j.jbi.2011.11.012  0.96
2012 Xiang Y, Payne PR, Huang K. Transactional database transformation and its application in prioritizing human disease genes. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 9: 294-304. PMID 21422495 DOI: 10.1109/TCBB.2011.58  0.96
2011 Payne P, Ervin D, Dhaval R, Borlawsky T, Lai A. TRIAD: The Translational Research Informatics and Data Management Grid. Applied Clinical Informatics. 2: 331-44. PMID 23616879 DOI: 10.4338/ACI-2011-02-RA-0014  0.96
2011 Sarkar IN, Payne PR. The joint summits on translational science: crossing the translational chasm. Journal of Biomedical Informatics. 44: S1-2. PMID 22138364 DOI: 10.1016/J.Jbi.2011.11.011  0.96
2011 Payne PR, Embi PJ, Kahn MG. Selected papers from the 2011 Summit on Clinical Research Informatics. Journal of Biomedical Informatics. 44: S54-5. PMID 22138363 DOI: 10.1016/j.jbi.2011.11.009  0.96
2011 Payne PR, Borlawsky TB, Lele O, James S, Greaves AW. The TOKEn project: knowledge synthesis for in silico science. Journal of the American Medical Informatics Association : Jamia. 18: i125-31. PMID 21984589 DOI: 10.1136/amiajnl-2011-000434  0.96
2011 Borlawsky TB, Lele O, Payne PR. Research-IQ: development and evaluation of an ontology-anchored integrative query tool. Journal of Biomedical Informatics. 44: S56-62. PMID 21821150 DOI: 10.1016/j.jbi.2011.07.006  0.96
2011 Hersh W, Jacko JA, Greenes R, Tan J, Janies D, Embi PJ, Payne PR. Health-care hit or miss? Nature. 470: 327-9. PMID 21331020 DOI: 10.1038/470327A  0.96
2010 Payne PR, Embi PJ, Johnson SB, Mendonca E, Starren J. Improving Clinical Trial Participant Tracking Tools Using Knowledge-anchored Design Methodologies. Applied Clinical Informatics. 1: 177-196. PMID 22132037 DOI: 10.4338/Aci-2010-02-Ra-0012  0.96
2010 Payne PR, Borlawsky TB, Rice R, Embi PJ. Evaluating the impact of conceptual knowledge engineering on the design and usability of a clinical and translational science collaboration portal. Amia Joint Summits On Translational Science Proceedings Amia Summit On Translational Science. 2010: 41-5. PMID 21347146  0.32
2010 Zhang J, Xiang Y, Ding L, Keen-Circle K, Borlawsky TB, Ozer HG, Jin R, Payne P, Huang K. Using gene co-expression network analysis to predict biomarkers for chronic lymphocytic leukemia. Bmc Bioinformatics. 11: S5. PMID 21044363 DOI: 10.1186/1471-2105-11-S9-S5  0.96
2010 Payne PR, Huang K, Keen-Circle K, Kundu A, Zhang J, Borlawsky TB. Multi-dimensional discovery of biomarker and phenotype complexes. Bmc Bioinformatics. 11: S3. PMID 21044361 DOI: 10.1186/1471-2105-11-S9-S3  0.96
2010 Payne PR, Embi PJ, Niland J. Foundational biomedical informatics research in the clinical and translational science era: a call to action. Journal of the American Medical Informatics Association : Jamia. 17: 615-6. PMID 20962120 DOI: 10.1136/jamia.2010.005165  0.96
2010 Langella S, Hastings S, Oster S, Payne P, Siebenlist F. Authentication and authorization in cancer research systems Biomedical Informatics For Cancer Research. 279-290. DOI: 10.1007/978-1-4419-5714-6_16  0.96
2009 Embi PJ, Kaufman SE, Payne PR. Biomedical informatics and outcomes research: enabling knowledge-driven health care. Circulation. 120: 2393-9. PMID 19996023 DOI: 10.1161/CIRCULATIONAHA.108.795526  0.96
2009 Payne PR, Embi PJ, Sen CK. Translational informatics: enabling high-throughput research paradigms. Physiological Genomics. 39: 131-40. PMID 19737991 DOI: 10.1152/physiolgenomics.00050.2009  0.96
2009 Embi PJ, Payne PR. Clinical research informatics: challenges, opportunities and definition for an emerging domain. Journal of the American Medical Informatics Association : Jamia. 16: 316-27. PMID 19261934 DOI: 10.1197/jamia.M3005  0.32
2009 Erdal S, Catalyurek UV, Payne PR, Saltz J, Kamal J, Gurcan MN. A knowledge-anchored integrative image search and retrieval system. Journal of Digital Imaging. 22: 166-82. PMID 18040742 DOI: 10.1007/s10278-007-9086-8  0.96
2009 Kundu A, Ozer HG, Borlawsky T, Circle KC, Huang K, Payne P. Clinical attribute network for chronic lymphocytic leukemia 2009 Ieee International Conference On Bioinformatics and Biomedicine, Bibm 2009. 279-282. DOI: 10.1109/BIBM.2009.77  0.96
2008 Saltz J, Kurc T, Hastings S, Langella S, Oster S, Ervin D, Sharma A, Pan T, Gurcan M, Permar J, Ferreira R, Payne P, Catalyurek U, Caserta E, Leone G, et al. e-Science, caGrid, and Translational Biomedical Research. Computer. 41: 58-66. PMID 21311723 DOI: 10.1109/MC.2008.459  0.96
2008 Kamal J, Silvey SA, Silvey SA, Buskirk J, Ostrander M, Erdal S, Dhaval R, Ding J, Borlawsky T, Smaltz DH, Smaltz DH, Payne PR, Payne PR. Innovative applications of an enterprise-wide information warehouse. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1134. PMID 18999273  0.96
2008 Borlawsky T, LaFountain J, Petty L, Saltz JH, Payne PR. Leveraging an existing data warehouse to annotate workflow models for operations research and optimization. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 885. PMID 18999220  0.96
2008 Dhaval R, Borlawsky T, Ostrander M, Santangelo J, Kamal J, Payne PR. Implementation of a metadata architecture and knowledge collection to support semantic interoperability in an enterprise data warehouse. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 929. PMID 18999040  0.96
2007 Saltz JH, Oster S, Hastings SL, Langella S, Ervin D, Payne PR. Integrating heterogeneous rules-engine technologies with caGrid. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1099. PMID 18694196  0.96
2007 Payne PR, Borlawsky T, Kamal J, Saltz JH. A framework for workflow-based clinical research billing disambiguation. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1071. PMID 18694169  0.96
2007 Payne PR, Mendonca EA, Starren JB. Modeling participant-related clinical research events using conceptual knowledge acquisition techniques. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 593-7. PMID 18693905  0.96
2007 Embi PJ, Payne PR, Kaufman SE, Logan JR, Barr CE. Identifying challenges and opportunities in clinical research informatics: analysis of a facilitated discussion at the 2006 AMIA Annual Symposium. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 221-5. PMID 18693830  0.32
2007 Khan SA, Kukafka R, Payne PR, Bigger JT, Johnson SB. A day in the life of a clinical research coordinator: observations from community practice settings. Studies in Health Technology and Informatics. 129: 247-51. PMID 17911716  0.96
2007 Payne PR, Mendonça EA, Johnson SB, Starren JB. Conceptual knowledge acquisition in biomedicine: A methodological review. Journal of Biomedical Informatics. 40: 582-602. PMID 17482521 DOI: 10.1016/J.Jbi.2007.03.005  0.96
2006 Starren JB, Payne PR, Kaufman DR. Human computer interaction issues in Clinical Trials Management Systems. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1109. PMID 17238728  0.96
2006 Payne PR, Deitzer JR, Mendonca EA, Starren JB. Consensus-based construction of a taxonomy of clinical trial tasks. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1059. PMID 17238678  0.96
2006 Deitzer JR, Payne PR, Starren JB. Coverage of clinical trials tasks in existing ontologies. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 903. PMID 17238522  0.96
2006 Chused A, Payne PR, Starren JB. Novel techniques for survey and classification studies to improve patient centered websites. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 891. PMID 17238510  0.96
2006 Khan SA, Payne PR, Johnson SB, Bigger JT, Kukafka R. Modeling clinical trials workflow in community practice settings. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 419-23. PMID 17238375  0.32
2006 Payne PRO, Starren J. Presentation Discovery: Building a better icon Conference On Human Factors in Computing Systems - Proceedings. 1223-1228. DOI: 10.1145/1125451.1125680  0.96
2005 Payne PR, Johnson SB, Starren JB, Tilson HH, Dowdy D. Breaking the translational barriers: the value of integrating biomedical informatics and translational research. Journal of Investigative Medicine : the Official Publication of the American Federation For Clinical Research. 53: 192-200. PMID 15974245 DOI: 10.2310/6650.2005.00402  0.96
2005 Payne PR, Starren JB. Quantifying visual similarity in clinical iconic graphics. Journal of the American Medical Informatics Association : Jamia. 12: 338-45. PMID 15684136 DOI: 10.1197/jamia.M1628  0.96
2003 Starren JB, Payne PR. Quantifying visual similarity in clinical iconic graphics. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1016. PMID 14728519  0.96
2003 Greaves AW, Payne PR, Rassenti L, Kipps TJ. CRC Tissue Core Management System (TCMS): integration of basic science and clinical data for translational research. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 853. PMID 14728358  0.96
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