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Elinor K. Karlsson, Ph.D. - Publications

Affiliations: 
2008 Boston University, Boston, MA, United States 
Area:
Genetics, Veterinary Science Biology, Zoology Biology
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69 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Roy A, Sakthikumar S, Kozyrev SV, Nordin J, Pensch R, Mäkeläinen S, Pettersson M, Karlsson EK, Lindblad-Toh K, Forsberg-Nilsson K. Using evolutionary constraint to define novel candidate driver genes in medulloblastoma. Proceedings of the National Academy of Sciences of the United States of America. 120: e2300984120. PMID 37549291 DOI: 10.1073/pnas.2300984120  0.302
2023 Kaplow IM, Lawler AJ, Schäffer DE, Srinivasan C, Sestili HH, Wirthlin ME, Phan BN, Prasad K, Brown AR, Zhang X, Foley K, Genereux DP, Karlsson EK, Lindblad-Toh K, Meyer WK, ... ... Karlsson EK, et al. Relating enhancer genetic variation across mammals to complex phenotypes using machine learning. Science (New York, N.Y.). 380: eabm7993. PMID 37104615 DOI: 10.1126/science.abm7993  0.338
2023 Sullivan PF, Meadows JRS, Gazal S, Phan BN, Li X, Genereux DP, Dong MX, Bianchi M, Andrews G, Sakthikumar S, Nordin J, Roy A, Christmas MJ, Marinescu VD, Wang C, ... ... Karlsson EK, ... ... Karlsson EK, et al. Leveraging base-pair mammalian constraint to understand genetic variation and human disease. Science (New York, N.Y.). 380: eabn2937. PMID 37104612 DOI: 10.1126/science.abn2937  0.433
2023 Keough KC, Whalen S, Inoue F, Przytycki PF, Fair T, Deng C, Steyert M, Ryu H, Lindblad-Toh K, Karlsson E, Nowakowski T, Ahituv N, Pollen A, Pollard KS, Andrews G, ... ... Karlsson EK, et al. Three-dimensional genome rewiring in loci with human accelerated regions. Science (New York, N.Y.). 380: eabm1696. PMID 37104607 DOI: 10.1126/science.abm1696  0.433
2023 Kirilenko BM, Munegowda C, Osipova E, Jebb D, Sharma V, Blumer M, Morales AE, Ahmed AW, Kontopoulos DG, Hilgers L, Lindblad-Toh K, Karlsson EK, Hiller M, Andrews G, Armstrong JC, ... ... Karlsson EK, et al. Integrating gene annotation with orthology inference at scale. Science (New York, N.Y.). 380: eabn3107. PMID 37104600 DOI: 10.1126/science.abn3107  0.391
2023 Christmas MJ, Kaplow IM, Genereux DP, Dong MX, Hughes GM, Li X, Sullivan PF, Hindle AG, Andrews G, Armstrong JC, Bianchi M, Breit AM, Diekhans M, Fanter C, Foley NM, ... ... Karlsson EK, ... ... Karlsson EK, et al. Evolutionary constraint and innovation across hundreds of placental mammals. Science (New York, N.Y.). 380: eabn3943. PMID 37104599 DOI: 10.1126/science.abn3943  0.694
2023 Xue JR, Mackay-Smith A, Mouri K, Garcia MF, Dong MX, Akers JF, Noble M, Li X, Lindblad-Toh K, Karlsson EK, Noonan JP, Capellini TD, Brennand KJ, Tewhey R, Sabeti PC, ... ... Karlsson EK, et al. The functional and evolutionary impacts of human-specific deletions in conserved elements. Science (New York, N.Y.). 380: eabn2253. PMID 37104592 DOI: 10.1126/science.abn2253  0.364
2023 Moon KL, Huson HJ, Morrill K, Wang MS, Li X, Srikanth K, Lindblad-Toh K, Svenson GJ, Karlsson EK, Shapiro B, Andrews G, Armstrong JC, Bianchi M, Birren BW, Bredemeyer KR, ... ... Karlsson EK, et al. ​Comparative genomics of Balto, a famous historic dog, captures lost diversity of 1920s sled dogs. Science (New York, N.Y.). 380: eabn5887. PMID 37104591 DOI: 10.1126/science.abn5887  0.36
2023 Foley NM, Mason VC, Harris AJ, Bredemeyer KR, Damas J, Lewin HA, Eizirik E, Gatesy J, Karlsson EK, Lindblad-Toh K, Springer MS, Murphy WJ, Andrews G, Armstrong JC, Bianchi M, ... ... Karlsson EK, et al. A genomic timescale for placental mammal evolution. Science (New York, N.Y.). 380: eabl8189. PMID 37104581 DOI: 10.1126/science.abl8189  0.38
2023 Andrews G, Fan K, Pratt HE, Phalke N, Karlsson EK, Lindblad-Toh K, Gazal S, Moore JE, Weng Z, Andrews G, Armstrong JC, Bianchi M, Birren BW, Bredemeyer KR, Breit AM, ... ... Karlsson EK, et al. Mammalian evolution of human cis-regulatory elements and transcription factor binding sites. Science (New York, N.Y.). 380: eabn7930. PMID 37104580 DOI: 10.1126/science.abn7930  0.356
2023 Wilder AP, Supple MA, Subramanian A, Mudide A, Swofford R, Serres-Armero A, Steiner C, Koepfli KP, Genereux DP, Karlsson EK, Lindblad-Toh K, Marques-Bonet T, Munoz Fuentes V, Foley K, Meyer WK, ... ... Karlsson EK, et al. The contribution of historical processes to contemporary extinction risk in placental mammals. Science (New York, N.Y.). 380: eabn5856. PMID 37104572 DOI: 10.1126/science.abn5856  0.345
2023 Osmanski AB, Paulat NS, Korstian J, Grimshaw JR, Halsey M, Sullivan KAM, Moreno-Santillán DD, Crookshanks C, Roberts J, Garcia C, Johnson MG, Densmore LD, Stevens RD, Rosen J, Storer JM, ... ... Karlsson EK, ... ... Karlsson EK, et al. Insights into mammalian TE diversity through the curation of 248 genome assemblies. Science (New York, N.Y.). 380: eabn1430. PMID 37104570 DOI: 10.1126/science.abn1430  0.378
2023 Sullivan PF, Meadows JRS, Gazal S, Phan BN, Li X, Genereux DP, Dong MX, Bianchi M, Andrews G, Sakthikumar S, Nordin J, Roy A, Christmas MJ, Marinescu VD, Wallerman O, ... ... Karlsson EK, et al. Leveraging Base Pair Mammalian Constraint to Understand Genetic Variation and Human Disease. Biorxiv : the Preprint Server For Biology. PMID 36945512 DOI: 10.1101/2023.03.10.531987  0.447
2022 Damas J, Corbo M, Kim J, Turner-Maier J, Farré M, Larkin DM, Ryder OA, Steiner C, Houck ML, Hall S, Shiue L, Thomas S, Swale T, Daly M, Korlach J, ... ... Karlsson EK, et al. Evolution of the ancestral mammalian karyotype and syntenic regions. Proceedings of the National Academy of Sciences of the United States of America. 119: e2209139119. PMID 36161960 DOI: 10.1073/pnas.2209139119  0.33
2022 Noh HJ, Turner-Maier J, Schulberg SA, Fitzgerald ML, Johnson J, Allen KN, Hückstädt LA, Batten AJ, Alfoldi J, Costa DP, Karlsson EK, Zapol WM, Buys ES, Lindblad-Toh K, Hindle AG. The Antarctic Weddell seal genome reveals evidence of selection on cardiovascular phenotype and lipid handling. Communications Biology. 5: 140. PMID 35177770 DOI: 10.1038/s42003-022-03089-2  0.404
2022 Stephan T, Burgess SM, Cheng H, Danko CG, Gill CA, Jarvis ED, Koepfli KP, Koltes JE, Lyons E, Ronald P, Ryder OA, Schriml LM, Soltis P, VandeWoude S, Zhou H, ... ... Karlsson EK, et al. Darwinian genomics and diversity in the tree of life. Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35042807 DOI: 10.1073/pnas.2115644119  0.44
2022 Blaxter M, Archibald JM, Childers AK, Coddington JA, Crandall KA, Di Palma F, Durbin R, Edwards SV, Graves JAM, Hackett KJ, Hall N, Jarvis ED, Johnson RN, Karlsson EK, Kress WJ, et al. Why sequence all eukaryotes? Proceedings of the National Academy of Sciences of the United States of America. 119. PMID 35042801 DOI: 10.1073/pnas.2115636118  0.325
2021 Lorenzana GP, Figueiró HV, Kaelin CB, Barsh GS, Johnson J, Karlsson E, Morato RG, Sana DA, Cullen L, May JA, Moraes EA, Kantek DLZ, Silveira L, Murphy WJ, Ryder OA, et al. Whole-genome sequences shed light onto the demographic history and contemporary genetic erosion of free-ranging jaguar (Panthera onca) populations. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 34767971 DOI: 10.1016/j.jgg.2021.10.006  0.346
2021 Kim JH, Megquier K, Thomas R, Sarver AL, Song JM, Kim YT, Cheng N, Schulte AJ, Linden MA, Murugan P, Oseth L, Forster CL, Elvers I, Swofford R, Turner-Maier J, ... Karlsson EK, et al. Genomically Complex Human Angiosarcoma and Canine Hemangiosarcoma Establish Convergent Angiogenic Transcriptional Programs Driven by Novel Gene Fusions. Molecular Cancer Research : McR. PMID 33649193 DOI: 10.1158/1541-7786.MCR-20-0937  0.307
2020 Armstrong J, Hickey G, Diekhans M, Fiddes IT, Novak AM, Deran A, Fang Q, Xie D, Feng S, Stiller J, Genereux D, Johnson J, Marinescu VD, Alföldi J, Harris RS, ... ... Karlsson E, et al. Progressive Cactus is a multiple-genome aligner for the thousand-genome era. Nature. 587: 246-251. PMID 33177663 DOI: 10.1038/s41586-020-2871-y  0.422
2020 Herrera-Álvarez S, Karlsson E, Ryder OA, Lindblad-Toh K, Crawford AJ. How to make a rodent giant: Genomic basis and tradeoffs of gigantism in the capybara, the world's largest rodent. Molecular Biology and Evolution. PMID 33169792 DOI: 10.1093/molbev/msaa285  0.391
2020 Damas J, Hughes GM, Keough KC, Painter CA, Persky NS, Corbo M, Hiller M, Koepfli KP, Pfenning AR, Zhao H, Genereux DP, Swofford R, Pollard KS, Ryder OA, Nweeia MT, ... ... Karlsson EK, et al. Broad host range of SARS-CoV-2 predicted by comparative and structural analysis of ACE2 in vertebrates. Proceedings of the National Academy of Sciences of the United States of America. PMID 32826334 DOI: 10.1073/Pnas.2010146117  0.335
2020 Zhou X, Dou Q, Fan G, Zhang Q, Sanderford M, Kaya A, Johnson J, Karlsson EK, Tian X, Mikhalchenko A, Kumar S, Seluanov A, Zhang ZD, Gorbunova V, Liu X, et al. Beaver and Naked Mole Rat Genomes Reveal Common Paths to Longevity. Cell Reports. 32: 107949. PMID 32726638 DOI: 10.1016/J.Celrep.2020.107949  0.463
2020 Sykes N, Beirne P, Horowitz A, Jones I, Kalof L, Karlsson E, King T, Litwak H, McDonald RA, Murphy LJ, Pemberton N, Promislow D, Rowan A, Stahl PW, Tehrani J, et al. Humanity's Best Friend: A Dog-Centric Approach to Addressing Global Challenges. Animals : An Open Access Journal From Mdpi. 10. PMID 32192138 DOI: 10.3390/Ani10030502  0.301
2020 Kim JH, Megquier K, Sarver AL, Thomas R, Schulte AJ, Wang C, Elvers I, Karlsson E, Breen M, Lindblad-Toh K, Modiano JF. Abstract 195: Molecular mechanisms that activate convergent oncogenic pathway in genomically complex angiosarcoma Cancer Research. 80: 195-195. DOI: 10.1158/1538-7445.Am2020-195  0.444
2019 Chauhan G, McClure J, Hekman J, Marsh PW, Bailey JA, Daniels RF, Genereux DP, Karlsson EK. Combining Citizen Science and Genomics to Investigate Tick, Pathogen, and Commensal Microbiome at Single-Tick Resolution. Frontiers in Genetics. 10: 1322. PMID 32038704 DOI: 10.3389/Fgene.2019.01322  0.355
2019 Lord KA, Larson G, Coppinger RP, Karlsson EK. The History of Farm Foxes Undermines the Animal Domestication Syndrome. Trends in Ecology & Evolution. PMID 31810775 DOI: 10.1016/J.Tree.2019.10.011  0.303
2019 Casewell NR, Petras D, Card DC, Suranse V, Mychajliw AM, Richards D, Koludarov I, Albulescu LO, Slagboom J, Hempel BF, Ngum NM, Kennerley RJ, Brocca JL, Whiteley G, Harrison RA, ... ... Karlsson EK, et al. Solenodon genome reveals convergent evolution of venom in eulipotyphlan mammals. Proceedings of the National Academy of Sciences of the United States of America. PMID 31772017 DOI: 10.1073/Pnas.1906117116  0.403
2019 Megquier K, Turner-Maier J, Swofford R, Kim JH, Sarver AL, Wang C, Sakthikumar S, Johnson J, Koltookian M, Lewellen M, Scott MC, Graef AJ, Borst L, Tonomura N, Alfoldi J, ... ... Karlsson EK, et al. Comparative genomics reveals shared mutational landscape in canine hemangiosarcoma and human angiosarcoma. Molecular Cancer Research : McR. PMID 31570656 DOI: 10.1158/1541-7786.Mcr-19-0221  0.508
2019 Mataix-Cols D, Hansen B, Mattheisen M, Karlsson EK, Addington AM, Boberg J, Djurfeldt DR, Halvorsen M, Lichtenstein P, Solem S, Lindblad-Toh K, Haavik J, Kvale G, Rück C, et al. Nordic OCD & Related Disorders Consortium: Rationale, design, and methods. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. PMID 31424634 DOI: 10.1002/Ajmg.B.32756  0.333
2019 Beichman AC, Koepfli KP, Li G, Murphy W, Dobrynin P, Kilver S, Tinker MT, Murray MJ, Johnson J, Lindblad-Toh K, Karlsson EK, Lohmueller KE, Wayne RK. Aquatic adaptation and depleted diversity: a deep dive into the genomes of the sea otter and giant otter. Molecular Biology and Evolution. PMID 31212313 DOI: 10.1093/Molbev/Msz101  0.431
2019 Megquier K, Genereux DP, Hekman J, Swofford R, Turner-Maier J, Johnson J, Alonso J, Li X, Morrill K, Anguish LJ, Koltookian M, Logan B, Sharp CR, Ferrer L, Lindblad-Toh K, ... ... Karlsson EK, et al. BarkBase: Epigenomic Annotation of Canine Genomes. Genes. 10. PMID 31181663 DOI: 10.3390/Genes10060433  0.513
2018 Moses L, Niemi S, Karlsson E. Pet genomics medicine runs wild. Nature. 559: 470-472. PMID 30046086 DOI: 10.1038/D41586-018-05771-0  0.359
2018 Goodman L, Karlsson EK. America's lost dogs. Science (New York, N.Y.). 361: 27-28. PMID 29976811 DOI: 10.1126/Science.Aau1306  0.302
2018 Palkopoulou E, Lipson M, Mallick S, Nielsen S, Rohland N, Baleka S, Karpinski E, Ivancevic AM, To TH, Kortschak RD, Raison JM, Qu Z, Chin TJ, Alt KW, Claesson S, ... ... Karlsson E, et al. A comprehensive genomic history of extinct and living elephants. Proceedings of the National Academy of Sciences of the United States of America. PMID 29483247 DOI: 10.1073/Pnas.1720554115  0.419
2017 Noh HJ, Tang R, Flannick J, O'Dushlaine C, Swofford R, Howrigan D, Genereux DP, Johnson J, van Grootheest G, Grünblatt E, Andersson E, Djurfeldt DR, Patel PD, Koltookian M, M Hultman C, ... ... Karlsson EK, et al. Integrating evolutionary and regulatory information with a multispecies approach implicates genes and pathways in obsessive-compulsive disorder. Nature Communications. 8: 774. PMID 29042551 DOI: 10.1038/S41467-017-00831-X  0.418
2016 Al-Mamun MM, Sarker SK, Qadri SK, Shirin T, Mohammad QD, LaRocque R, Karlsson EK, Saha N, Asaduzzaman M, Qadri F, Mannoor MK. Examination of Huntington's disease with atypical clinical features in a Bangladeshi family tree. Clinical Case Reports. 4: 1191-1194. PMID 27980761 DOI: 10.1002/Ccr3.743  0.301
2015 Vieira NM, Elvers I, Alexander MS, Moreira YB, Eran A, Gomes JP, Marshall JL, Karlsson EK, Verjovski-Almeida S, Lindblad-Toh K, Kunkel LM, Zatz M. Jagged 1 Rescues the Duchenne Muscular Dystrophy Phenotype. Cell. 163: 1204-13. PMID 26582133 DOI: 10.1016/J.Cell.2015.10.049  0.376
2015 Kamberov YG, Karlsson EK, Kamberova GL, Lieberman DE, Sabeti PC, Morgan BA, Tabin CJ. A genetic basis of variation in eccrine sweat gland and hair follicle density. Proceedings of the National Academy of Sciences of the United States of America. 112: 9932-7. PMID 26195765 DOI: 10.1073/Pnas.1511680112  0.362
2015 Tonomura N, Elvers I, Thomas R, Megquier K, Turner-Maier J, Howald C, Sarver AL, Swofford R, Frantz AM, Ito D, Mauceli E, Arendt M, Noh HJ, Koltookian M, Biagi T, ... ... Karlsson EK, et al. Genome-wide association study identifies shared risk loci common to two malignancies in golden retrievers. Plos Genetics. 11: e1004922. PMID 25642983 DOI: 10.1371/Journal.Pgen.1004922  0.409
2014 Baranowska Körberg I, Sundström E, Meadows JR, Rosengren Pielberg G, Gustafson U, Hedhammar Å, Karlsson EK, Seddon J, Söderberg A, Vilà C, Zhang X, Åkesson M, Lindblad-Toh K, Andersson G, Andersson L. A simple repeat polymorphism in the MITF-M promoter is a key regulator of white spotting in dogs. Plos One. 9: e104363. PMID 25116146 DOI: 10.1371/Journal.Pone.0104363  0.333
2014 Tang R, Noh HJ, Wang D, Sigurdsson S, Swofford R, Perloski M, Duxbury M, Patterson EE, Albright J, Castelhano M, Auton A, Boyko AR, Feng G, Lindblad-Toh K, Karlsson EK. Candidate genes and functional noncoding variants identified in a canine model of obsessive-compulsive disorder. Genome Biology. 15: R25. PMID 24995881 DOI: 10.1186/Gb-2014-15-3-R25  0.475
2014 Karlsson EK, Kwiatkowski DP, Sabeti PC. Natural selection and infectious disease in human populations. Nature Reviews. Genetics. 15: 379-93. PMID 24776769 DOI: 10.1038/Nrg3734  0.442
2013 Karlsson EK, Sigurdsson S, Ivansson E, Thomas R, Elvers I, Wright J, Howald C, Tonomura N, Perloski M, Swofford R, Biagi T, Fryc S, Anderson N, Courtay-Cahen C, Youell L, et al. Genome-wide analyses implicate 33 loci in heritable dog osteosarcoma, including regulatory variants near CDKN2A/B. Genome Biology. 14: R132. PMID 24330828 DOI: 10.1186/Gb-2013-14-12-R132  0.482
2013 Karlsson EK, Harris JB, Tabrizi S, Rahman A, Shlyakhter I, Patterson N, O'Dushlaine C, Schaffner SF, Gupta S, Chowdhury F, Sheikh A, Shin OS, Ellis C, Becker CE, Stuart LM, et al. Natural selection in a bangladeshi population from the cholera-endemic ganges river delta. Science Translational Medicine. 5: 192ra86. PMID 23825302 DOI: 10.1126/Scitranslmed.3006338  0.4
2013 Grossman SR, Andersen KG, Shlyakhter I, Tabrizi S, Winnicki S, Yen A, Park DJ, Griesemer D, Karlsson EK, Wong SH, Cabili M, Adegbola RA, Bamezai RN, Hill AV, Vannberg FO, et al. Identifying recent adaptations in large-scale genomic data. Cell. 152: 703-13. PMID 23415221 DOI: 10.1016/J.Cell.2013.01.035  0.514
2012 Larson G, Karlsson EK, Perri A, Webster MT, Ho SY, Peters J, Stahl PW, Piper PJ, Lingaas F, Fredholm M, Comstock KE, Modiano JF, Schelling C, Agoulnik AI, Leegwater PA, et al. Rethinking dog domestication by integrating genetics, archeology, and biogeography. Proceedings of the National Academy of Sciences of the United States of America. 109: 8878-83. PMID 22615366 DOI: 10.1073/Pnas.1203005109  0.38
2011 Vaysse A, Ratnakumar A, Derrien T, Axelsson E, Rosengren Pielberg G, Sigurdsson S, Fall T, Seppälä EH, Hansen MS, Lawley CT, Karlsson EK, Bannasch D, Vilà C, Lohi H, et al. Identification of genomic regions associated with phenotypic variation between dog breeds using selection mapping. Plos Genetics. 7: e1002316. PMID 22022279 DOI: 10.1371/Journal.Pgen.1002316  0.502
2011 Seppälä EH, Jokinen TS, Fukata M, Fukata Y, Webster MT, Karlsson EK, Kilpinen SK, Steffen F, Dietschi E, Leeb T, Eklund R, Zhao X, Rilstone JJ, Lindblad-Toh K, Minassian BA, et al. LGI2 truncation causes a remitting focal epilepsy in dogs. Plos Genetics. 7: e1002194. PMID 21829378 DOI: 10.1371/Journal.Pgen.1002194  0.369
2011 Van Tyne D, Park DJ, Schaffner SF, Neafsey DE, Angelino E, Cortese JF, Barnes KG, Rosen DM, Lukens AK, Daniels RF, Milner DA, Johnson CA, Shlyakhter I, Grossman SR, Becker JS, ... ... Karlsson EK, et al. Identification and functional validation of the novel antimalarial resistance locus PF10_0355 in Plasmodium falciparum. Plos Genetics. 7: e1001383. PMID 21533027 DOI: 10.1371/Journal.Pgen.1001383  0.453
2011 Olsson M, Meadows JR, Truvé K, Rosengren Pielberg G, Puppo F, Mauceli E, Quilez J, Tonomura N, Zanna G, Docampo MJ, Bassols A, Avery AC, Karlsson EK, Thomas A, Kastner DL, et al. A novel unstable duplication upstream of HAS2 predisposes to a breed-defining skin phenotype and a periodic fever syndrome in Chinese Shar-Pei dogs. Plos Genetics. 7: e1001332. PMID 21437276 DOI: 10.1371/Journal.Pgen.1001332  0.437
2010 Wilbe M, Jokinen P, Truvé K, Seppala EH, Karlsson EK, Biagi T, Hughes A, Bannasch D, Andersson G, Hansson-Hamlin H, Lohi H, Lindblad-Toh K. Genome-wide association mapping identifies multiple loci for a canine SLE-related disease complex. Nature Genetics. 42: 250-4. PMID 20101241 DOI: 10.1038/Ng.525  0.42
2010 Grossman SR, Shlyakhter I, Shylakhter I, Karlsson EK, Byrne EH, Morales S, Frieden G, Hostetter E, Angelino E, Garber M, Zuk O, Lander ES, Schaffner SF, Sabeti PC. A composite of multiple signals distinguishes causal variants in regions of positive selection. Science (New York, N.Y.). 327: 883-6. PMID 20056855 DOI: 10.1126/Science.1183863  0.429
2010 Grossman SR, Shlyakhter I, Karlsson EK, Tabrizi S, Andersen KG, Rinn JL, Lander ES, Schaffner S, Sabeti PC. Mining data from 1000 genomes to identify the causal variant in regions under positive selection Genome Biology. 11: 1-1. DOI: 10.1186/Gb-2010-11-S1-I22  0.481
2009 Thomas R, Valli VE, Ellis P, Bell J, Karlsson EK, Cullen J, Lindblad-Toh K, Langford CF, Breen M. Microarray-based cytogenetic profiling reveals recurrent and subtype-associated genomic copy number aberrations in feline sarcomas Chromosome Research. 17: 987-1000. PMID 19941159 DOI: 10.1007/S10577-009-9096-0  0.426
2009 Haas BJ, Kamoun S, Zody MC, Jiang RH, Handsaker RE, Cano LM, Grabherr M, Kodira CD, Raffaele S, Torto-Alalibo T, Bozkurt TO, Ah-Fong AM, Alvarado L, Anderson VL, Armstrong MR, ... ... Karlsson EK, et al. Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans. Nature. 461: 393-8. PMID 19741609 DOI: 10.1038/Nature08358  0.506
2008 Thomas R, Duke SE, Karlsson EK, Evans A, Ellis P, Lindblad-Toh K, Langford CF, Breen M. A genome assembly-integrated dog 1 Mb BAC microarray: a cytogenetic resource for canine cancer studies and comparative genomic analysis. Cytogenetic and Genome Research. 122: 110-21. PMID 19096206 DOI: 10.1159/000163088  0.503
2008 Drögemüller C, Karlsson EK, Hytönen MK, Perloski M, Dolf G, Sainio K, Lohi H, Lindblad-Toh K, Leeb T. A mutation in hairless dogs implicates FOXI3 in ectodermal development. Science (New York, N.Y.). 321: 1462. PMID 18787161 DOI: 10.1126/Science.1162525  0.347
2008 Karlsson EK, Lindblad-Toh K. Leader of the pack: gene mapping in dogs and other model organisms. Nature Reviews. Genetics. 9: 713-25. PMID 18714291 DOI: 10.1038/Nrg2382  0.422
2008 Van Den Berg L, Vos-Loohuis M, Schilder MBH, Van Oost BA, Hazewinkel HAW, Wade CM, Karlsson EK, Lindblad-Toh K, Liinamo AE, Leegwater PAJ. Evaluation of the serotonergic genes htr1A, htr1B, htr2A, and slc6A4 in aggressive behavior of Golden Retriever dogs Behavior Genetics. 38: 55-66. PMID 18066658 DOI: 10.1007/S10519-007-9179-7  0.392
2007 Karlsson EK, Baranowska I, Wade CM, Salmon Hillbertz NH, Zody MC, Anderson N, Biagi TM, Patterson N, Pielberg GR, Kulbokas EJ, Comstock KE, Keller ET, Mesirov JP, von Euler H, Kämpe O, et al. Efficient mapping of mendelian traits in dogs through genome-wide association. Nature Genetics. 39: 1321-8. PMID 17906626 DOI: 10.1038/Ng.2007.10  0.614
2007 Thomas R, Duke SE, Bloom SK, Breen TE, Young AC, Feiste E, Seiser EL, Tsai PC, Langford CF, Ellis P, Karlsson EK, Lindblad-Toh K, Breen M. A cytogenetically characterized, genome-anchored 10-Mb BAC set and CGH array for the domestic dog. The Journal of Heredity. 98: 474-84. PMID 17702974 DOI: 10.1093/Jhered/Esm053  0.448
2006 Wade CM, Karlsson EK, Mikkelsen TS, Zody MC, Lindblad-Toh K. 11 The Dog Genome: Sequence, Evolution, and Haplotype Structure Cold Spring Harbor Monograph Archive. 44: 179-207. DOI: 10.1101/087969781.44.179  0.552
2005 Lindblad-Toh K, Wade CM, Mikkelsen TS, Karlsson EK, Jaffe DB, Kamal M, Clamp M, Chang JL, Kulbokas EJ, Zody MC, Mauceli E, Xie X, Breen M, Wayne RK, Ostrander EA, et al. Genome sequence, comparative analysis and haplotype structure of the domestic dog. Nature. 438: 803-19. PMID 16341006 DOI: 10.1038/Nature04338  0.563
2005 Thomas R, Scott A, Langford CF, Fosmire SP, Jubala CM, Lorentzen TD, Hitte C, Karlsson EK, Kirkness E, Ostrander EA, Galibert F, Lindblad-Toh K, Modiano JF, Breen M. Construction of a 2-Mb resolution BAC microarray for CGH analysis of canine tumors. Genome Research. 15: 1831-7. PMID 16339382 DOI: 10.1101/Gr.3825705  0.487
2005 Vinson JP, Jaffe DB, O'Neill K, Karlsson EK, Stange-Thomann N, Anderson S, Mesirov JP, Satoh N, Satou Y, Nusbaum C, Birren B, Galagan JE, Lander ES. Assembly of polymorphic genomes: algorithms and application to Ciona savignyi. Genome Research. 15: 1127-35. PMID 16077012 DOI: 10.1101/Gr.3722605  0.627
2005 Bernstein BE, Kamal M, Lindblad-Toh K, Bekiranov S, Bailey DK, Huebert DJ, McMahon S, Karlsson EK, Kulbokas EJ, Gingeras TR, Schreiber SL, Lander ES. Genomic maps and comparative analysis of histone modifications in human and mouse. Cell. 120: 169-81. PMID 15680324 DOI: 10.1016/J.Cell.2005.01.001  0.359
2004 O'Lone R, Frith MC, Karlsson EK, Hansen U. Genomic targets of nuclear estrogen receptors. Molecular Endocrinology (Baltimore, Md.). 18: 1859-75. PMID 15031323 DOI: 10.1210/Me.2003-0044  0.393
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