Bertram Ludascher - Publications

Computer Science University of California, Davis, Davis, CA 
Computer Science

24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Franz NM, Musher LJ, Brown JW, Yu S, Ludäscher B. Verbalizing phylogenomic conflict: Representation of node congruence across competing reconstructions of the neoavian explosion. Plos Computational Biology. 15: e1006493. PMID 30768597 DOI: 10.1371/Journal.Pcbi.1006493  0.4
2016 Franz NM, Pier NM, Reeder DM, Chen M, Yu S, Kianmajd P, Bowers S, Ludäscher B. Two Influential Primate Classifications Logically Aligned. Systematic Biology. PMID 27009895 DOI: 10.1093/Sysbio/Syw023  0.4
2015 Franz NM, Chen M, Yu S, Kianmajd P, Bowers S, Ludäscher B. Reasoning over taxonomic change: exploring alignments for the Perelleschus use case. Plos One. 10: e0118247. PMID 25700173 DOI: 10.1371/Journal.Pone.0118247  0.6
2015 Sarkar A, Kohler S, Ludascher B, Bishop M. Insider Attack Identification and Prevention in Collection-Oriented Dataflow-Based Processes Ieee Systems Journal. DOI: 10.1109/Jsyst.2015.2477472  1
2014 Cuevas-Vicenttín V, Kianmajd P, Ludäscher B, Missier P, Chirigati FS, Wei Y, Koop D, Dey SC. The PBase Scientific Workflow Provenance Repository International Journal of Digital Curation. 9: 28-38. DOI: 10.2218/Ijdc.V9I2.332  0.4
2013 Morris RA, Dou L, Hanken J, Kelly M, Lowery DB, Ludäscher B, Macklin JA, Morris PJ. Semantic annotation of mutable data. Plos One. 8: e76093. PMID 24223697 DOI: 10.1371/Journal.Pone.0076093  1
2013 Dey S, Ludascher B. A declarative approach to customize workflow provenance Acm International Conference Proceeding Series. 9-16. DOI: 10.1145/2457317.2457320  1
2012 Stropp T, McPhillips T, Ludäscher B, Bieda M. Workflows for microarray data processing in the Kepler environment. Bmc Bioinformatics. 13: 102. PMID 22594911 DOI: 10.1186/1471-2105-13-102  1
2012 Missier P, Ludäscher B, Dey SC, Wang M, McPhillips TM, Bowers S, Agun M, Altintas I. Golden-Trail: Retrieving the Data History that Matters from a Comprehensive Provenance Repository International Journal of Digital Curation. 7: 139-150. DOI: 10.2218/Ijdc.V7I1.221  0.4
2012 Cuevas-Vicenttin V, Dey S, Wang MLY, Song T, Ludascher B. Modeling and querying scientific workflow provenance in the D-OPM Proceedings - 2012 Sc Companion: High Performance Computing, Networking Storage and Analysis, Scc 2012. 119-128. DOI: 10.1109/SC.Companion.2012.27  1
2012 Cuevas-Vicenttín V, Dey SC, Köhler S, Riddle S, Ludäscher B. Scientific Workflows and Provenance: Introduction and Research Opportunities Datenbank-Spektrum. 12: 193-203. DOI: 10.1007/S13222-012-0100-Z  0.32
2010 Hartman AL, Riddle S, McPhillips T, Ludäscher B, Eisen JA. Introducing W.A.T.E.R.S.: a workflow for the alignment, taxonomy, and ecology of ribosomal sequences. Bmc Bioinformatics. 11: 317. PMID 20540779 DOI: 10.1186/1471-2105-11-317  1
2010 Blahnik KR, Dou L, O'Geen H, McPhillips T, Xu X, Cao AR, Iyengar S, Nicolet CM, Ludäscher B, Korf I, Farnham PJ. Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data. Nucleic Acids Research. 38: e13. PMID 19906703 DOI: 10.1093/Nar/Gkp1012  1
2010 Zinn D, Bowers S, Köhler S, Ludäscher B. Parallelizing XML data-streaming workflows via MapReduce Journal of Computer and System Sciences. 76: 447-463. DOI: 10.1016/J.Jcss.2009.11.006  1
2009 Zinn D, Bowersy S, McPhillipsy T, Ludascher B. X-CSR: Dataflow optimization for distributed XML process pipelines Proceedings - International Conference On Data Engineering. 577-580. DOI: 10.1109/ICDE.2009.72  1
2009 McPhillips T, Bowers S, Zinn D, Ludäscher B. Scientific workflow design for mere mortals Future Generation Computer Systems. 25: 541-551. DOI: 10.1016/J.Future.2008.06.013  1
2007 Ceberio M, Kreinovich V, Chopra S, Longpré L, Nguyen HT, Ludäscher B, Baral C. Interval-type and affine arithmetic-type techniques for handling uncertainty in expert systems Journal of Computational and Applied Mathematics. 199: 403-410. DOI: 10.1016/J.Cam.2005.08.030  1
2006 Ludäscher B, Altintas I, Berkley C, Higgins D, Jaeger E, Jones M, Lee EA, Tao J, Zhao Y. Scientific workflow management and the Kepler system: Research Articles Concurrency and Computation: Practice and Experience. 18: 1039-1065. DOI: 10.1002/Cpe.V18:10  0.32
2006 Ludäscher B, Altintas I, Berkley C, Higgins D, Jaeger E, Jones MB, Lee EA, Tao J, Zhao Y. Scientific Workflow Management and the Kepler System Concurrency and Computation: Practice and Experience. 18: 1039-1065. DOI: 10.1002/Cpe.994  0.32
2003 Gupta A, Ludäscher B, Grethe JS, Martone ME. Towards a formalization of disease-specific ontologies for neuroinformatics. Neural Networks : the Official Journal of the International Neural Network Society. 16: 1277-92. PMID 14622884 DOI: 10.1016/J.Neunet.2003.07.008  1
2003 Ludäscher B, Gupta A, Martone ME. A model-based mediator system for scientific data management Bioinformatics: Managing Scientific Data. 335-370. DOI: 10.1016/B978-155860829-0/50014-0  1
2002 Martone ME, Gupta A, Wong M, Qian X, Sosinsky G, Ludäscher B, Ellisman MH. A cell-centered database for electron tomographic data. Journal of Structural Biology. 138: 145-55. PMID 12160711 DOI: 10.1016/S1047-8477(02)00006-0  1
2002 Marciano R, Ludascher B, Zaslavsky I, Moore R, Pezzoli K. Multi-level information modeling and preservation of eGOV data Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2456: 93-100.  1
2001 Burns GAPC, Stephan K, Ludäscher B, Gupta A, Kötter R. Towards a federated neuroscientific knowledge management system using brain atlases Neurocomputing. 38: 1633-1641. DOI: 10.1016/S0925-2312(01)00520-3  1
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