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Chi-Ren Shyu - Publications

Affiliations: 
University of Missouri - Columbia, Columbia, MO, United States 
Area:
Computer Science
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Year Citation  Score
2020 Zhuang Y, Sheets L, Chen YW, Shae Z, Tsai JJP, Shyu CR. A Patient-Centric Health Information Exchange Framework Using Blockchain Technology. Ieee Journal of Biomedical and Health Informatics. PMID 32396110 DOI: 10.1109/Jbhi.2020.2993072  0.301
2020 Giannaris PS, Al-Taie Z, Kovalenko M, Thanintorn N, Kholod O, Innokenteva Y, Coberly E, Frazier S, Laziuk K, Popescu M, Shyu CR, Xu D, Hammer RD, Shin D. Artificial Intelligence-Driven Structurization of Diagnostic Information in Free-Text Pathology Reports. Journal of Pathology Informatics. 11: 4. PMID 32166042 DOI: 10.4103/Jpi.Jpi_30_19  0.615
2019 Liu D, Baskett W, Beversdorf D, Shyu CR. Exploratory Data Mining for Subgroup Cohort Discoveries and Prioritization. Ieee Journal of Biomedical and Health Informatics. PMID 31494566 DOI: 10.1109/Jbhi.2019.2939149  0.367
2019 Haithcoat TL, Avery EE, Bowers KA, Hammer RD, Shyu C. Income Inequality and Health: Expanding Our Understanding of State-Level Effects by Using a Geospatial Big Data Approach: Social Science Computer Review. 89443931987299. DOI: 10.25384/Sage.C.4653500.V1  0.305
2017 Shin D, Kovalenko M, Ersoy I, Li Y, Doll D, Shyu CR, Hammer R. PathEdEx - Uncovering High-explanatory Visual Diagnostics Heuristics Using Digital Pathology and Multiscale Gaze Data. Journal of Pathology Informatics. 8: 29. PMID 28828200 DOI: 10.4103/Jpi.Jpi_29_17  0.576
2017 Ersoy I, Kovalenko M, Shyu C, Hammer R, Shin D. Eye Gaze Pattern Analysis of Whole Slide Image Viewing Behavior in PathEdEx Platform Microscopy and Microanalysis. 23: 248-249. DOI: 10.1017/S1431927617001921  0.556
2016 Cao H, Li Y, Allen CM, Phinney MA, Shyu CR. Visual reasoning indexing and retrieval using in-memory computing Proceedings - 2016 Ieee 2nd International Conference On Multimedia Big Data, Bigmm 2016. 17-24. DOI: 10.1142/S1793351X16400110  0.412
2016 Cao H, Li Y, Allen CM, Phinney MA, Shyu C. Visual Reasoning Indexing and Retrieval Using In-Memory Computing International Journal of Semantic Computing. 10: 299-322. DOI: 10.1142/S1793351X16400110  0.304
2015 Chan LW, Liu Y, Chan T, Law HK, Wong SC, Yeung AP, Lo KF, Yeung SW, Kwok KY, Chan WY, Lau TY, Shyu CR. PubMed-supported clinical term weighting approach for improving inter-patient similarity measure in diagnosis prediction. Bmc Medical Informatics and Decision Making. 15: 43. PMID 26032596 DOI: 10.1186/S12911-015-0166-2  0.311
2015 Chan LW, Pang B, Shyu CR, Chan T, Khong PL. Genetic algorithm supported by graphical processing unit improves the exploration of effective connectivity in functional brain imaging. Frontiers in Computational Neuroscience. 9: 50. PMID 25999846 DOI: 10.3389/Fncom.2015.00050  0.319
2014 Han JG, Cao H, Barb A, Punyasena SW, Jaramillo C, Shyu CR. A neotropical Miocene pollen database employing image-based search and semantic modeling. Applications in Plant Sciences. 2. PMID 25202648 DOI: 10.3732/Apps.1400030  0.788
2014 Shin D, Arthur G, Popescu M, Korkin D, Shyu CR. Uncovering influence links in molecular knowledge networks to streamline personalized medicine. Journal of Biomedical Informatics. 52: 394-405. PMID 25150201 DOI: 10.1016/J.Jbi.2014.08.003  0.582
2014 Chen Z, Shin D, Chen S, Mikhail K, Hadass O, Tomlison BN, Korkin D, Shyu CR, Cui J, Anthony DC, Gu Z. Histological quantitation of brain injury using whole slide imaging: a pilot validation study in mice. Plos One. 9: e92133. PMID 24637518 DOI: 10.1371/Journal.Pone.0092133  0.546
2013 Barb AS, Clariana RB, Shyu CR. Applications of pathfinder network scaling for improving the ranking of satellite images Ieee Journal of Selected Topics in Applied Earth Observations and Remote Sensing. 6: 1092-1099. DOI: 10.1109/Jstars.2013.2242254  0.774
2012 Pang B, Kuang X, Zhao N, Korkin D, Shyu CR. PBSword: a web server for searching similar protein-protein binding sites. Nucleic Acids Research. 40: W428-34. PMID 22689645 DOI: 10.1093/Nar/Gks527  0.3
2012 Shin D, Arthur G, Caldwell C, Popescu M, Petruc M, Diaz-Arias A, Shyu CR. A pathologist-in-the-loop IHC antibody test selection using the entropy-based probabilistic method. Journal of Pathology Informatics. 3: 1. PMID 22439121 DOI: 10.4103/2153-3539.93393  0.536
2012 Klaric MN, Scott GJ, Shyu CR. Multi-index multi-object content-based retrieval Ieee Transactions On Geoscience and Remote Sensing. 50: 4036-4049. DOI: 10.1109/Tgrs.2012.2187353  0.347
2012 Barb AS, Shyu CR. Associative semantic ranking of satellite images using PathFinder Network Scaling ensemble methods International Geoscience and Remote Sensing Symposium (Igarss). 5289-5292. DOI: 10.1109/IGARSS.2012.6352415  0.751
2012 Klaric MN, Anderson B, Shyu CR. Information mining from human visual reasoning about multi-temporal, high-resolution satellite imagery International Journal of Image and Data Fusion. 3: 243-256. DOI: 10.1080/19479832.2012.683821  0.468
2012 Barb AS, Shyu CR. A study of factors that influence the accuracy of content-based geospatial ranking systems International Journal of Image and Data Fusion. 3: 257-268. DOI: 10.1080/19479832.2012.681401  0.763
2012 Wang X, Erdelez S, Allen C, Anderson B, Cao H, Shyu CR. Role of domain knowledge in developing user-centered medical-image indexing Journal of the American Society For Information Science and Technology. 63: 225-241. DOI: 10.1002/Asi.21686  0.428
2011 Harnsomburana J, Green JM, Barb AS, Schaeffer M, Vincent L, Shyu CR. Computable visually observed phenotype ontological framework for plants. Bmc Bioinformatics. 12: 260. PMID 21702966 DOI: 10.1186/1471-2105-12-260  0.75
2011 Barb AS, Shyu CR. Semantic models for ranking medical images using Dirichlet non-parametric mixture models 2011 Ieee 13th International Conference On E-Health Networking, Applications and Services, Healthcom 2011. 344-350. DOI: 10.1109/HEALTH.2011.6026776  0.766
2011 Wang X, Erdelez S, Lu Y, Allen C, Anderson B, Cao H, Shyu CR. Search tactics for medical image retrieval Proceedings of the Asist Annual Meeting. 48. DOI: 10.1002/meet.2011.14504801346  0.334
2010 Shyu CR, Pang B, Chi PH, Zhao N, Korkin D, Xu D. ProteinDBS v2.0: a web server for global and local protein structure search. Nucleic Acids Research. 38: W53-8. PMID 20538653 DOI: 10.1093/Nar/Gkq522  0.559
2010 Barb AS, Shyu CR. Visual-semantic modeling in content-based geospatial information retrieval using associative mining techniques Ieee Geoscience and Remote Sensing Letters. 7: 38-42. DOI: 10.1109/Lgrs.2009.2017214  0.795
2010 Barb AS, Shyu CR. Visual information mining and ranking using graded relevance assessments in satellite image databases International Geoscience and Remote Sensing Symposium (Igarss). 3398-3401. DOI: 10.1109/IGARSS.2010.5650173  0.794
2009 Chi PH, Pang B, Korkin D, Shyu CR. Efficient SCOP-fold classification and retrieval using index-based protein substructure alignments. Bioinformatics (Oxford, England). 25: 2559-65. PMID 19667079 DOI: 10.1093/Bioinformatics/Btp474  0.543
2008 Mahamaneerat WK, Shyu CR, Stewart BR, Armer JM. Breast cancer treatment, BMI, post-op swelling/lymphoedema. Journal of Lymphoedema. 3: 38-44. PMID 20657749  0.722
2008 Pena-Hernandez KE, Pena-Hernandez KE, Mahamaneerat WK, Mahamaneerat WK, Kobayashi T, Shyu CR, Arthur G, Caldwell CW, Caldwell CW. Mapping biomedical literature with WNT signaling pathway. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1089. PMID 18999226  0.744
2008 Barb AS, Shyu CR. Ontology driven content mining and semantic queries for satellite image databases International Geoscience and Remote Sensing Symposium (Igarss). 3. DOI: 10.1109/IGARSS.2008.4779394  0.774
2007 Shyu CR, Klaric M, Scott GJ, Barb AS, Davis CH, Palaniappan K. GeoIRIS: Geospatial Information Retrieval and Indexing System-Content Mining, Semantics Modeling, and Complex Queries. Ieee Transactions On Geoscience and Remote Sensing : a Publication of the Ieee Geoscience and Remote Sensing Society. 45: 839-852. PMID 18270555 DOI: 10.1109/Tgrs.2006.890579  0.795
2007 Shyu CR, Harnsomburana J, Green J, Barb AS, Kazic T, Schaeffer M, Coe E. Searching and mining visually observed phenotypes of maize mutants. Journal of Bioinformatics and Computational Biology. 5: 1193-213. PMID 18172925 DOI: 10.1142/S0219720007003181  0.747
2007 Barb AS, Shyu CR. User-specific semantics for modeling content-based geospatial knowledge International Geoscience and Remote Sensing Symposium (Igarss). 330-333. DOI: 10.1109/IGARSS.2007.4422797  0.788
2007 Mahamaneerat WK, Shyu CR, Ho SC, Chang CA. Domain-concept association rules mining for large-scale and complex cellular manufacturing tasks Journal of Manufacturing Technology Management. 18: 787-806. DOI: 10.1108/17410380710817255  0.741
2006 Mahamaneerat WK, Shyu CR. Knowledge discovery using Domain-Concept Mining approach for the Behavioral Risk Factor Surveillance System (BRFSS) data. Amia ... Annual Symposium Proceedings / Amia Symposium. Amia Symposium. 1021. PMID 17238640  0.76
2006 Chi PH, Shyu CR, Xu D. A fast SCOP fold classification system using content-based E-Predict algorithm. Bmc Bioinformatics. 7: 362. PMID 16872501 DOI: 10.1186/1471-2105-7-362  0.55
2006 Shyu CR, Klaric M, Scott G, Mahamaneerat WK. Knowledge discovery by mining association rules and temporal-spatial information from large-scale geospatial image databases International Geoscience and Remote Sensing Symposium (Igarss). 17-20. DOI: 10.1109/IGARSS.2006.9  0.797
2006 Chi PH, Shyu CR. Predicting ranked SCOP domains by mining associations of visual contents in distance matrices Series On Advances in Bioinformatics and Computational Biology. 3: 49-58.  0.579
2005 Barb AS, Shyu CR, Sethi YP. Knowledge representation and sharing using visual semantic modeling for diagnostic medical image databases. Ieee Transactions On Information Technology in Biomedicine : a Publication of the Ieee Engineering in Medicine and Biology Society. 9: 538-53. PMID 16379371 DOI: 10.1109/TITB.2005.855563  0.784
2005 CHI P, SCOTT G, SHYU C. A FAST PROTEIN STRUCTURE RETRIEVAL SYSTEM USING IMAGE-BASED DISTANCE MATRICES AND MULTIDIMENSIONAL INDEX International Journal of Software Engineering and Knowledge Engineering. 15: 527-545. DOI: 10.1142/S0218194005002439  0.576
2005 Shyu CR, Barb AS, Davis CH. Mining image content associations for visual semantic modeling in geospatial information indexing and retrieval International Geoscience and Remote Sensing Symposium (Igarss). 8: 5622-5625. DOI: 10.1109/IGARSS.2005.1526051  0.774
2004 Shyu CR, Chi PH, Scott G, Xu D. ProteinDBS: a real-time retrieval system for protein structure comparison. Nucleic Acids Research. 32: W572-5. PMID 15215453 DOI: 10.1093/Nar/Gkh436  0.576
2004 Barb AS, Shyu CR, Sethi Y. Semantic integration and knowledge exchange for diagnostic medical image databases Proceedings - Fourth Ieee Symposium On Bioinformatics and Bioengineering, Bibe 2004. 175-182. DOI: 10.1109/BIBE.2004.1317340  0.775
2003 Barb A, Shyu CR. Semantics modeling in diagnostic medical image databases using customized fuzzy membership functions Ieee International Conference On Fuzzy Systems. 2: 1159-1164.  0.777
2002 Shyu CR, Havermann S, Stice K, Davis G. RFLPRetriever: A content-based retrieval system for biological image databases Proceedings of Spie - the International Society For Optical Engineering. 4676: 98-105. DOI: 10.1117/12.451080  0.433
2002 Shyu CR, Pavlopoulou C, Kak AC, Brodley CE, Broderick LS. Using human perceptual categories for content-based retrieval from a medical image database Computer Vision and Image Understanding. 88: 119-151. DOI: 10.1006/Cviu.2002.0972  0.345
2002 Harnsomburana J, Shyu CR. A hybrid tree approach for efficient image database retrieval with dynamic feedback Proceedings - International Conference On Pattern Recognition. 16: 263-266.  0.304
1999 Shyu CR, Brodley CE, Kak AC, Kosaka A, Aisen AM, Broderick LS. ASSERT: A physician-in-the-loop content-based retrieval system for HRCT image databases Computer Vision and Image Understanding. 75: 111-132. DOI: 10.1006/Cviu.1999.0768  0.325
1999 Dy JG, Brodley CE, Kak A, Shyu C, Broderick LS. Customized-queries approach to CBIR using EM Proceedings of the Ieee Computer Society Conference On Computer Vision and Pattern Recognition. 2: 400-406.  0.322
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