| Year |
Citation |
Score |
| 2020 |
Frankish A, Diekhans M, Jungreis I, Lagarde J, Loveland JE, Mudge JM, Sisu C, Wright JC, Armstrong J, Barnes I, Berry A, Bignell A, Boix C, Carbonell Sala S, Cunningham F, ... ... Pei B, et al. GENCODE 2021. Nucleic Acids Research. PMID 33270111 DOI: 10.1093/nar/gkaa1087 |
0.343 |
|
| 2018 |
Frankish A, Diekhans M, Ferreira AM, Johnson R, Jungreis I, Loveland J, Mudge JM, Sisu C, Wright J, Armstrong J, Barnes I, Berry A, Bignell A, Carbonell Sala S, Chrast J, ... ... Pei B, et al. GENCODE reference annotation for the human and mouse genomes. Nucleic Acids Research. PMID 30357393 DOI: 10.1093/Nar/Gky955 |
0.498 |
|
| 2015 |
Pervouchine DD, Djebali S, Breschi A, Davis CA, Barja PP, Dobin A, Tanzer A, Lagarde J, Zaleski C, See LH, Fastuca M, Drenkow J, Wang H, Bussotti G, Pei B, et al. Enhanced transcriptome maps from multiple mouse tissues reveal evolutionary constraint in gene expression. Nature Communications. 6: 5903. PMID 25582907 DOI: 10.1038/Ncomms6903 |
0.477 |
|
| 2014 |
Gerstein MB, Rozowsky J, Yan KK, Wang D, Cheng C, Brown JB, Davis CA, Hillier L, Sisu C, Li JJ, Pei B, Harmanci AO, Duff MO, Djebali S, Alexander RP, et al. Comparative analysis of the transcriptome across distant species. Nature. 512: 445-8. PMID 25164755 DOI: 10.1038/Nature13424 |
0.403 |
|
| 2014 |
Sisu C, Pei B, Leng J, Frankish A, Zhang Y, Balasubramanian S, Harte R, Wang D, Rutenberg-Schoenberg M, Clark W, Diekhans M, Rozowsky J, Hubbard T, Harrow J, Gerstein MB. Comparative analysis of pseudogenes across three phyla. Proceedings of the National Academy of Sciences of the United States of America. 111: 13361-6. PMID 25157146 DOI: 10.1073/Pnas.1407293111 |
0.402 |
|
| 2013 |
Abyzov A, Iskow R, Gokcumen O, Radke DW, Balasubramanian S, Pei B, Habegger L, Lee C, Gerstein M. Analysis of variable retroduplications in human populations suggests coupling of retrotransposition to cell division. Genome Research. 23: 2042-52. PMID 24026178 DOI: 10.1101/Gr.154625.113 |
0.398 |
|
| 2012 |
Zhao Y, Chen MH, Pei B, Rowe D, Shin DG, Xie W, Yu F, Kuo L. A Bayesian Approach to Pathway Analysis by Integrating Gene-Gene Functional Directions and Microarray Data. Statistics in Biosciences. 4: 105-131. PMID 23482678 DOI: 10.1007/S12561-011-9046-1 |
0.669 |
|
| 2012 |
Pei B, Shin DG. Reconstruction of biological networks by incorporating prior knowledge into Bayesian network models. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 19: 1324-34. PMID 23210479 DOI: 10.1089/Cmb.2011.0194 |
0.577 |
|
| 2012 |
Harrow J, Frankish A, Gonzalez JM, Tapanari E, Diekhans M, Kokocinski F, Aken BL, Barrell D, Zadissa A, Searle S, Barnes I, Bignell A, Boychenko V, Hunt T, Kay M, ... ... Pei B, et al. GENCODE: the reference human genome annotation for The ENCODE Project. Genome Research. 22: 1760-74. PMID 22955987 DOI: 10.1101/Gr.135350.111 |
0.401 |
|
| 2012 |
Pei B, Sisu C, Frankish A, Howald C, Habegger L, Mu XJ, Harte R, Balasubramanian S, Tanzer A, Diekhans M, Reymond A, Hubbard TJ, Harrow J, Gerstein MB. The GENCODE pseudogene resource. Genome Biology. 13: R51. PMID 22951037 DOI: 10.1186/Gb-2012-13-9-R51 |
0.421 |
|
| 2010 |
Pei B, Rowe DW, Shin DG. Learning Bayesian networks with integration of indirect prior knowledge. International Journal of Data Mining and Bioinformatics. 4: 505-19. PMID 21133038 DOI: 10.1504/IJDMB.2010.035897 |
0.558 |
|
| 2009 |
Shin DG, Kazmi SA, Pei B, Kim YA, Maddox J, Nori R, Wong A, Krueger W, Rowe D. Computing consistency between microarray data and known gene regulation relationships. Ieee Transactions On Information Technology in Biomedicine : a Publication of the Ieee Engineering in Medicine and Biology Society. 13: 1075-82. PMID 19783507 DOI: 10.1109/TITB.2009.2032540 |
0.659 |
|
| 2008 |
Pei B, Rowe DW, Shin DG. Reverse engineering of gene regulatory network by integration of prior global gene regulatory information Proceedings - Ieee International Conference On Bioinformatics and Biomedicine, Bibm 2008. 129-134. DOI: 10.1109/BIBM.2008.55 |
0.602 |
|
| 2008 |
Kazmi SA, Kim YA, Pei B, Ravi N, Rowe DW, Wang HW, Wong A, Shin DG. Meta analysis of microarray data using gene regulation pathways Proceedings - Ieee International Conference On Bioinformatics and Biomedicine, Bibm 2008. 37-42. DOI: 10.1109/BIBM.2008.32 |
0.634 |
|
| Show low-probability matches. |