Anoop M. Mayampurath, Ph.D. - Publications

Affiliations: 
2013 Informatics Indiana University, Bloomington, Bloomington, IN, United States 
Area:
Bioinformatics Biology

25 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Yu CY, Mayampurath A, Zhu R, Zacharias L, Song E, Wang L, Mechref Y, Tang H. Automated glycan sequencing from tandem mass spectra of N-linked glycopeptides. Analytical Chemistry. PMID 27111718 DOI: 10.1021/Acs.Analchem.5B04858  0.52
2015 Rosebeck S, Alonge MM, Kandarpa M, Mayampurath A, Volchenboum S, Jasielec J, Dytfeld D, Maxwell SP, Kraftson SJ, McCauley D, Shacham S, Kauffman M, Jakubowiak AJ. Synergistic Myeloma Cell Death via Novel Intracellular Activation of Caspase 10-dependent Apoptosis by Carfilzomib and Selinexor. Molecular Cancer Therapeutics. PMID 26637366 DOI: 10.1158/1535-7163.Mct-15-0488  0.52
2015 Truman AW, Kristjansdottir K, Wolfgeher D, Ricco N, Mayampurath A, Volchenboum SL, Clotet J, Kron SJ. The quantitative changes in the yeast Hsp70 and Hsp90 interactomes upon DNA damage. Data in Brief. 2: 12-5. PMID 26217697 DOI: 10.1016/J.Dib.2014.10.006  0.52
2015 Dytfeld D, Rosebeck S, Kandarpa M, Mayampurath A, Mellacheruvu D, Alonge MM, Ngoka L, Jasielec J, Richardson PG, Volchenboum S, Nesvizhskii AI, Sreekumar A, Jakubowiak AJ. Proteomic profiling of naïve multiple myeloma patient plasma cells identifies pathways associated with favourable response to bortezomib-based treatment regimens. British Journal of Haematology. 170: 66-79. PMID 25824111 DOI: 10.1111/Bjh.13394  0.52
2015 Hu Y, Mayampurath A, Khan S, Cohen JK, Mechref Y, Volchenboum SL. N-linked glycan profiling in neuroblastoma cell lines. Journal of Proteome Research. 14: 2074-81. PMID 25730103 DOI: 10.1021/Pr5011718  0.52
2015 Truman AW, Kristjansdottir K, Wolfgeher D, Ricco N, Mayampurath A, Volchenboum SL, Clotet J, Kron SJ. Quantitative proteomics of the yeast Hsp70/Hsp90 interactomes during DNA damage reveal chaperone-dependent regulation of ribonucleotide reductase. Journal of Proteomics. 112: 285-300. PMID 25452130 DOI: 10.1016/J.Jprot.2014.09.028  0.52
2014 Song E, Mayampurath A, Yu CY, Tang H, Mechref Y. Glycoproteomics: identifying the glycosylation of prostate specific antigen at normal and high isoelectric points by LC-MS/MS. Journal of Proteome Research. 13: 5570-80. PMID 25327667 DOI: 10.1021/Pr500575R  0.52
2014 Mayampurath A, Song E, Mathur A, Yu CY, Hammoud Z, Mechref Y, Tang H. Label-free glycopeptide quantification for biomarker discovery in human sera. Journal of Proteome Research. 13: 4821-32. PMID 24946017 DOI: 10.1021/Pr500242M  0.52
2014 Tang H, Mayampurath A, Yu CY, Mechref Y. Bioinformatics protocols in glycomics and glycoproteomics. Current Protocols in Protein Science / Editorial Board, John E. Coligan ... [Et Al.]. 76: 2.15.1-7. PMID 24692013 DOI: 10.1002/0471140864.Ps0215S76  0.52
2014 Mayampurath A, Yu CY, Song E, Balan J, Mechref Y, Tang H. Computational framework for identification of intact glycopeptides in complex samples. Analytical Chemistry. 86: 453-63. PMID 24279413 DOI: 10.1021/Ac402338U  0.52
2013 Yu CY, Mayampurath A, Hu Y, Zhou S, Mechref Y, Tang H. Automated annotation and quantification of glycans using liquid chromatography-mass spectrometry. Bioinformatics (Oxford, England). 29: 1706-7. PMID 23610369 DOI: 10.1093/Bioinformatics/Btt190  0.52
2013 Yu CY, Mayampurath A, Tang H. Software tools for glycan profiling. Methods in Molecular Biology (Clifton, N.J.). 951: 269-76. PMID 23296537 DOI: 10.1007/978-1-62703-146-2_18  0.52
2012 Wierzbicki AT, Cocklin R, Mayampurath A, Lister R, Jordan Rowley M, Gregory BD, Ecker JR, Tang H, Pikaard CS. Spatial and functional relationships among Pol V-associated loci, Pol IV-dependent siRNAs, and cytosine methylation in the Arabidopsis epigenome Genes and Development. 26: 1825-1836. PMID 22855789 DOI: 10.1101/Gad.197772.112  0.52
2011 Mayampurath AM, Wu Y, Segu ZM, Mechref Y, Tang H. Improving confidence in detection and characterization of protein N-glycosylation sites and microheterogeneity. Rapid Communications in Mass Spectrometry : Rcm. 25: 2007-19. PMID 21698683 DOI: 10.1002/Rcm.5059  0.52
2011 Mayampurath AM, Yu CY, Mechref Y, Tang H. Bioinformatic approaches in glycomics and glycoproteomics Current Proteomics. 8: 309-324. DOI: 10.2174/157016411798220817  0.52
2010 Shah AR, Davidson J, Monroe ME, Mayampurath AM, Danielson WF, Shi Y, Robinson AC, Clowers BH, Belov ME, Anderson GA, Smith RD. An efficient data format for mass spectrometry-based proteomics. Journal of the American Society For Mass Spectrometry. 21: 1784-8. PMID 20674389 DOI: 10.1016/J.Jasms.2010.06.014  0.52
2010 Shah AR, Agarwal K, Baker ES, Singhal M, Mayampurath AM, Ibrahim YM, Kangas LJ, Monroe ME, Zhao R, Belov ME, Anderson GA, Smith RD. Machine learning based prediction for peptide drift times in ion mobility spectrometry. Bioinformatics (Oxford, England). 26: 1601-7. PMID 20495001 DOI: 10.1093/Bioinformatics/Btq245  0.52
2010 Wu Y, Mechref Y, Klouckova I, Mayampurath A, Novotny MV, Tang H. Mapping site-specific protein N-glycosylations through liquid chromatography/mass spectrometry and targeted tandem mass spectrometry. Rapid Communications in Mass Spectrometry : Rcm. 24: 965-72. PMID 20209665 DOI: 10.1002/Rcm.4474  0.52
2010 Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, ... ... Mayampurath A, et al. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Science (New York, N.Y.). 327: 343-8. PMID 20075255 DOI: 10.1126/Science.1178028  0.52
2010 Petyuk VA, Mayampurath AM, Monroe ME, Polpitiya AD, Purvine SO, Anderson GA, Camp DG, Smith RD. DtaRefinery, a software tool for elimination of systematic errors from parent ion mass measurements in tandem mass spectra data sets. Molecular & Cellular Proteomics : McP. 9: 486-96. PMID 20019053 DOI: 10.1074/Mcp.M900217-Mcp200  0.52
2010 Baker ES, Livesay EA, Orton DJ, Moore RJ, Danielson WF, Prior DC, Ibrahim YM, LaMarche BL, Mayampurath AM, Schepmoes AA, Hopkins DF, Tang K, Smith RD, Belov ME. An LC-IMS-MS platform providing increased dynamic range for high-throughput proteomic studies. Journal of Proteome Research. 9: 997-1006. PMID 20000344 DOI: 10.1021/Pr900888B  0.52
2009 Jaitly N, Mayampurath A, Littlefield K, Adkins JN, Anderson GA, Smith RD. Decon2LS: An open-source software package for automated processing and visualization of high resolution mass spectrometry data. Bmc Bioinformatics. 10: 87. PMID 19292916 DOI: 10.1186/1471-2105-10-87  0.52
2008 López-Ferrer D, Heibeck TH, Petritis K, Hixson KK, Qian W, Monroe ME, Mayampurath A, Moore RJ, Belov ME, Camp DG, Smith RD. Rapid sample processing for LC-MS-based quantitative proteomics using high intensity focused ultrasound. Journal of Proteome Research. 7: 3860-7. PMID 18686986 DOI: 10.1021/Pr800161X  0.52
2008 Mayampurath AM, Jaitly N, Purvine SO, Monroe ME, Auberry KJ, Adkins JN, Smith RD. DeconMSn: a software tool for accurate parent ion monoisotopic mass determination for tandem mass spectra. Bioinformatics (Oxford, England). 24: 1021-3. PMID 18304935 DOI: 10.1093/Bioinformatics/Btn063  0.52
2007 Sharma S, Simpson DC, Tolić N, Jaitly N, Mayampurath AM, Smith RD, Pasa-Tolić L. Proteomic profiling of intact proteins using WAX-RPLC 2-D separations and FTICR mass spectrometry. Journal of Proteome Research. 6: 602-10. PMID 17269717 DOI: 10.1021/Pr060354A  0.52
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