Katheleen Gardiner - Publications

Affiliations: 
Computer Science University of Colorado Anschutz Medical Campus, Denver, Aurora, CO 
Area:
Computer Science, Bioinformatics Biology

74 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Minter R, Gardiner KJ. Trisomy of Human Chromosome 21 Orthologs Mapping to Mouse Chromosome 10 Cause Age and Sex-Specific Learning Differences: Relevance to Down Syndrome. Genes. 12. PMID 34828303 DOI: 10.3390/genes12111697  0.351
2016 Delabar JM, Allinquant B, Bianchi D, Blumenthal T, Dekker A, Edgin J, O'Bryan J, Dierssen M, Potier MC, Wiseman F, Guedj F, Créau N, Reeves R, Gardiner K, Busciglio J. Changing Paradigms in Down Syndrome: The First International Conference of the Trisomy 21 Research Society. Molecular Syndromology. 7: 251-261. PMID 27867340 DOI: 10.1159/000449049  0.345
2016 Gupta M, Dhanasekaran AR, Gardiner KJ. Mouse models of Down syndrome: gene content and consequences. Mammalian Genome : Official Journal of the International Mammalian Genome Society. PMID 27538963 DOI: 10.1007/s00335-016-9661-8  0.374
2015 Block A, Ahmed MM, Dhanasekaran AR, Tong S, Gardiner KJ. Sex differences in protein expression in the mouse brain and their perturbations in a model of Down syndrome. Biology of Sex Differences. 6: 24. PMID 26557979 DOI: 10.1186/s13293-015-0043-9  0.363
2013 Kuhn DE, Nuovo GJ, Martin MM, Malana GE, Pleister AP, Jiang J, Schmittgen TD, Terry AV, Gardiner K, Head E, Feldman DS, Elton TS. Retraction notice to "Human chromosome 21-derived miRNAs are over-expressed in down syndrome brains and hearts" [Biochem. Biophys. Res. Commun. 370 (2008) 473-477] Biochemical and Biophysical Research Communications. 436: 564. DOI: 10.1016/J.Bbrc.2013.06.083  0.325
2012 Sturgeon X, Le T, Ahmed MM, Gardiner KJ. Pathways to cognitive deficits in Down syndrome. Progress in Brain Research. 197: 73-100. PMID 22541289 DOI: 10.1016/B978-0-444-54299-1.00005-4  0.3
2011 Sturgeon X, Gardiner KJ. Transcript catalogs of human chromosome 21 and orthologous chimpanzee and mouse regions. Mammalian Genome : Official Journal of the International Mammalian Genome Society. 22: 261-71. PMID 21400203 DOI: 10.1007/s00335-011-9321-y  0.394
2010 Gardiner K, Herault Y, Lott IT, Antonarakis SE, Reeves RH, Dierssen M. Down syndrome: from understanding the neurobiology to therapy. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 30: 14943-5. PMID 21068296 DOI: 10.1523/Jneurosci.3728-10.2010  0.38
2008 Voronov SV, Frere SG, Giovedi S, Pollina EA, Borel C, Zhang H, Schmidt C, Akeson EC, Wenk MR, Cimasoni L, Arancio O, Davisson MT, Antonarakis SE, Gardiner K, De Camilli P, et al. Synaptojanin 1-linked phosphoinositide dyshomeostasis and cognitive deficits in mouse models of Down's syndrome. Proceedings of the National Academy of Sciences of the United States of America. 105: 9415-20. PMID 18591654 DOI: 10.1073/Pnas.0803756105  0.355
2007 Nguyen C, Thaicharoen S, Lacroix T, Gardiner K, Cios KJ. A comprehensive human chromosome 21 database. Ieee Engineering in Medicine and Biology Magazine : the Quarterly Magazine of the Engineering in Medicine & Biology Society. 26: 86-93. PMID 17441613 DOI: 10.1109/Memb.2007.335593  0.42
2007 Du Y, Stasko M, Costa AC, Davisson MT, Gardiner KJ. Editing of the serotonin 2C receptor pre-mRNA: Effects of the Morris Water Maze. Gene. 391: 186-97. PMID 17307311 DOI: 10.1016/J.Gene.2006.12.023  0.519
2006 Gardiner K, Costa AC. The proteins of human chromosome 21. American Journal of Medical Genetics. Part C, Seminars in Medical Genetics. 142: 196-205. PMID 17048356 DOI: 10.1002/Ajmg.C.30098  0.496
2006 Du Y, Davisson MT, Kafadar K, Gardiner K. A-to-I pre-mRNA editing of the serotonin 2C receptor: comparisons among inbred mouse strains. Gene. 382: 39-46. PMID 16904273 DOI: 10.1016/J.Gene.2006.06.007  0.552
2006 Ma'ayan A, Gardiner K, Iyengar R. The cognitive phenotype of Down syndrome: insights from intracellular network analysis. Neurorx : the Journal of the American Society For Experimental Neurotherapeutics. 3: 396-406. PMID 16815222 DOI: 10.1016/J.Nurx.2006.05.036  0.373
2006 Gardiner K, Du Y. A-to-I editing of the 5HT2C receptor and behaviour. Briefings in Functional Genomics & Proteomics. 5: 37-42. PMID 16769676 DOI: 10.1093/Bfgp/Ell006  0.546
2006 Gardiner K. Transcriptional dysregulation in Down syndrome: predictions for altered protein complex stoichiometries and post-translational modifications, and consequences for learning/behavior genes ELK, CREB, and the estrogen and glucocorticoid receptors. Behavior Genetics. 36: 439-53. PMID 16502135 DOI: 10.1007/S10519-006-9051-1  0.443
2005 Nikolaienko O, Nguyen C, Crinc LS, Cios KJ, Gardiner K. Human chromosome 21/Down syndrome gene function and pathway database. Gene. 364: 90-8. PMID 16310977 DOI: 10.1016/J.Gene.2005.07.019  0.471
2005 Brahe C, Tassone F, Millington-Ward A, Serra A, Gardiner K. Potential gene sequence isolation and regional mapping in human chromosome 21. American Journal of Medical Genetics. 37: 120-124. PMID 2127361 DOI: 10.1002/Ajmg.1320370724  0.461
2004 Gardiner K. Gene-dosage effects in Down syndrome and trisomic mouse models. Genome Biology. 5: 244. PMID 15461808 DOI: 10.1186/Gb-2004-5-10-244  0.431
2004 Gardiner K, Davisson MT, Crnic LS. Building protein interaction maps for Down's syndrome. Briefings in Functional Genomics & Proteomics. 3: 142-56. PMID 15355596 DOI: 10.1093/Bfgp/3.2.142  0.465
2004 Brazma A, Freeman T, Gardiner K, Weissman S, Werner T, Korn B. Report on the thirteenth international workshop on the identification and functional, evolutionary and expression analysis of transcribed sequences: comparative and functional genomics workshop. Cytogenetic and Genome Research. 105: 11-7. PMID 15218252 DOI: 10.1159/000078003  0.314
2004 Tsyba LO, Skrypkina IY, Nikolaienko OV, Ferenets GO, Gordiyuk VV, Gardiner K, Rynditch AV. Alternative splicing of intersectin 1 gene pre-mRNA: expression of transcriptional isoforms Biopolymers & Cell. 20: 515-523. DOI: 10.7124/Bc.0006D2  0.329
2003 Gardiner K. Predicting pathway perturbations in Down syndrome Journal of Neural Transmission, Supplement. 21-37. PMID 15068236 DOI: 10.1007/978-3-7091-6721-2_2  0.479
2003 Gardiner K, Fortna A, Bechtel L, Davisson MT. Mouse models of Down syndrome: how useful can they be? Comparison of the gene content of human chromosome 21 with orthologous mouse genomic regions. Gene. 318: 137-47. PMID 14585506 DOI: 10.1016/S0378-1119(03)00769-8  0.505
2002 Werner T, Weissman S, Hedges SB, Gardiner K. Report on the twelfth international workshop on the identification of transcribed sequences: functional, expression and evolutionary analysis. Cytogenetic and Genome Research. 98: 109-17. PMID 12697992 DOI: 10.1159/000069801  0.31
2002 Slavov D, Gardiner K. Phylogenetic comparison of the pre-mRNA adenosine deaminase ADAR2 genes and transcripts: Conservation and diversity in editing site sequence and alternative splicing patterns Gene. 299: 83-94. PMID 12459255 DOI: 10.1016/S0378-1119(02)01016-8  0.401
2002 Gardiner K, Slavov D, Bechtel L, Davisson M. Annotation of human chromosome 21 for relevance to Down syndrome: gene structure and expression analysis. Genomics. 79: 833-43. PMID 12036298 DOI: 10.1006/Geno.2002.6782  0.502
2001 Davisson MT, Bechtel LJ, Akeson EC, Fortna A, Slavov D, Gardiner K. Evolutionary breakpoints on human chromosome 21. Genomics. 78: 99-106. PMID 11707078 DOI: 10.1006/Geno.2001.6639  0.486
2001 Akeson EC, Lambert JP, Narayanswami S, Gardiner K, Bechtel LJ, Davisson MT. Ts65Dn -- localization of the translocation breakpoint and trisomic gene content in a mouse model for Down syndrome. Cytogenetic and Genome Research. 93: 270-276. PMID 11528125 DOI: 10.1159/000056997  0.476
2001 Kurdyukov SG, Lebedev YB, Artamonova II, Gorodentseva TN, Batrak AV, Mamedov IZ, Azhikina TL, Legchilina SP, Efimenko IG, Gardiner K, Sverdlov ED. Full-sized HERV-K (HML-2) human endogenous retroviral LTR sequences on human chromosome 21: map locations and evolutionary history Gene. 273: 51-61. PMID 11483360 DOI: 10.1016/S0378-1119(01)00570-4  0.458
2001 Davisson MT, Gardiner K, Costa AC. Report and abstracts of the ninth international workshop on the molecular biology of human chromosome 21 and Down syndrome. Bar Harbor, Maine, USA. 23-26 September 2000 Cytogenetics and Cell Genetics. 92: 1-22. PMID 11306794 DOI: 10.1159/000056866  0.396
2000 Gardiner K, Davisson M. The sequence of human chromosome 21 and implications for research into Down syndrome Genome Biology. 1. PMID 11178230 DOI: 10.1186/Gb-2000-1-2-Reviews0002  0.488
2000 Wieser R, Volz A, Vinatzer U, Gardiner K, Jäger U, Mitterbauer M, Ziegler A, Fonatsch C. Transcription Factor GATA-2 Gene Is Located Near 3q21 Breakpoints in Myeloid Leukemia Biochemical and Biophysical Research Communications. 273: 239-245. PMID 10873593 DOI: 10.1006/Bbrc.2000.2947  0.448
2000 Slavov D, Crnogorac-Jurčević T, Clark M, Gardiner K. Comparative analysis of the DRADA A-to-I RNA editing gene from mammals, pufferfish and zebrafish. Gene. 250: 53-60. PMID 10854778 DOI: 10.1016/S0378-1119(00)00175-X  0.413
2000 Slavov D, Clark M, Gardiner K. Comparative analysis of the RED1 and RED2 A-to-I RNA editing genes from mammals, pufferfish and zebrafish Gene. 250: 41-51. PMID 10854777 DOI: 10.1016/S0378-1119(00)00174-8  0.42
2000 Hattori M, Fujiyama A, Taylor TD, Watanabe H, Yada T, Park HS, Toyoda A, Ishii K, Totoki Y, Choi DK, Groner Y, Soeda E, Ohki M, Takagi T, Sakaki Y, ... ... Gardiner K, et al. The DNA sequence of human chromosome 21. Nature. 405: 311-9. PMID 10830953 DOI: 10.1038/35012518  0.501
2000 Slavov D, Hattori M, Sakaki Y, Rosenthal A, Shimizu N, Minoshima S, Kudoh J, Yaspo ML, Ramser J, Reinhardt R, Reimer C, Clancy K, Rynditch A, Gardiner K. Criteria for gene identification and features of genome organization: analysis of 6.5 Mb of DNA sequence from human chromosome 21. Gene. 247: 215-32. PMID 10773462 DOI: 10.1016/S0378-1119(00)00089-5  0.444
2000 Skripkina IY, Tsyba LA, Slavov D, Kvasha SM, Gardiner K, Rynditch AV. Identification and characterization of mouse homologue of human Nnp-I gene localized in 21q22.3 Biopolymers & Cell. 16: 530-539. DOI: 10.7124/Bc.000594  0.432
1999 Tassone F, Lucas R, Slavov D, Kavsan V, Crnic L, Gardiner K. Gene expression relevant to Down syndrome: problems and approaches. Journal of Neural Transmission. Supplementum. 57: 179-95. PMID 10666675 DOI: 10.1007/978-3-7091-6380-1_11  0.432
1999 Patterson D, Bleskan J, Gardiner K, Bowersox J. Human phosphoribosylformylglycineamide amidotransferase (FGARAT): regional mapping, complete coding sequence, isolation of a functional genomic clone, and DNA sequence analysis Gene. 239: 381-391. PMID 10548741 DOI: 10.1016/S0378-1119(99)00378-9  0.465
1999 Gardiner K. Human chromosome 21. Why 40 Mb? Annals of the New York Academy of Sciences. 870: 362-368. PMID 10415499 DOI: 10.1111/J.1749-6632.1999.Tb08904.X  0.42
1999 Gardiner K. Saturation indentification of coding sequences in genomic DNA Methods in Enzymology. 303: 144-161. PMID 10349644 DOI: 10.1016/S0076-6879(99)03012-8  0.376
1999 Tassone F, Villard L, Clancy K, Gardiner K. Structures, sequence characteristics, and synteny relationships of the transcription factor E4TF1, the splicing factor U2AF35 and the cystathionine beta synthetase genes from Fugu rubripes. Gene. 226: 211-23. PMID 9931491 DOI: 10.1016/S0378-1119(98)00559-9  0.468
1999 Reboul J, Gardiner K, Monneron D, Uzé G, Lutfalla G. Comparative Genomic Analysis of the Interferon/Interleukin-10 Receptor Gene Cluster Genome Research. 9: 242-250. DOI: 10.1101/Gr.9.3.242  0.31
1998 Saupe S, Roizès G, Peter M, Boyle S, Gardiner K, Sario AD. Molecular Cloning of a Human cDNA IGSF3 Encoding an Immunoglobulin-like Membrane Protein: Expression and Mapping to Chromosome Band 1p13 Genomics. 52: 305-311. PMID 9790749 DOI: 10.1006/Geno.1998.5439  0.493
1998 Villard L, Tassone F, Crnogorac-Jurcević T, Clancy K, Gardiner K. Analysis of pufferfish homologues of the AT-rich human APP gene. Gene. 210: 17-24. PMID 9599080 DOI: 10.1016/S0378-1119(98)00032-8  0.427
1997 Gardiner K. Clonability and gene distribution on human chromosome 21: Reflections of junk DNA content? Gene. 205: 39-46. PMID 9461378 DOI: 10.1016/S0378-1119(97)00481-2  0.482
1997 Villard L, Tassone F, Haymowicz M, Welborn R, Gardiner K. Map location, genomic organization and expression patterns of the human RED1 RNA editase. Somatic Cell and Molecular Genetics. 23: 135-45. PMID 9330641 DOI: 10.1007/Bf02679972  0.47
1997 Rynditch A, Pekarsky Y, Schnittger S, Gardiner K. Leukemia breakpoint region in 3q21 is gene rich Gene. 193: 49-57. PMID 9249066 DOI: 10.1016/S0378-1119(97)00076-0  0.458
1996 Gardiner K. Base composition and gene distribution: Critical patterns in mammalian genome organization Trends in Genetics. 12: 519-524. PMID 9257535 DOI: 10.1016/S0168-9525(97)81400-X  0.437
1996 Cabin DE, Gardiner K, Reeves RH. Molecular genetic characterization and comparative mapping of the human PCP4 gene Somatic Cell and Molecular Genetics. 22: 167-175. PMID 8914602 DOI: 10.1007/Bf02369907  0.487
1996 Gardiner K, Ichikawa H, Ohki M, Patterson D, Cheng JF. Localization of cDNAs to a region poorly represented in the CEPH chromosome 21 YAC contig: candidate genes for genetic diseases mapped to 21q22.3. Genomics. 30: 376-9. PMID 8586445 DOI: 10.1006/Geno.1995.0035  0.47
1995 Graw SL, Gardiner K, Hall-Johnson K, Hart I, Joetham A, Walton K, Donaldson D, Patterson D. Molecular analysis and breakpoint definition of a set of human chromosome 21 somatic cell hybrids. Somatic Cell and Molecular Genetics. 21: 415-428. PMID 8600569 DOI: 10.1007/Bf02310208  0.441
1995 Gardiner K, Graw S, Ichikawa H, Ohki M, Joetham A, Gervy P, Chumakov I, Patterson D. YAC Analysis and Minimal Tiling Path Construction for Chromosome 21q Somatic Cell and Molecular Genetics. 21: 399-414. PMID 8600568 DOI: 10.1007/Bf02310207  0.443
1995 Potier MC, Chelot E, Pekarsky Y, Gardiner K, Rossier J, Turnell WG. The human myosin light chain kinase (MLCK) from hippocampus: cloning, sequencing, expression, and localization to 3qcen-q21. Genomics. 29: 562-70. PMID 8575746 DOI: 10.1006/Geno.1995.9965  0.376
1995 Tassone F, Xu H, Burkin H, Weissman S, Gardiner K. cDNA selection from 10 Mb of chromosome 21 DNA: efficiency in transcriptional mapping and reflections of genome organization. Human Molecular Genetics. 4: 1509-18. PMID 8541833 DOI: 10.1093/Hmg/4.9.1509  0.471
1995 Soeda E, Hou DX, Osoegawa K, Atsuchi Y, Yamagata T, Shimokawa T, Kishida H, Okano S, Chumakov I, Cohen D, Raff M, Gardiner K, Graw SL, Patterson D, De Jong P, et al. Cosmid assembly and anchoring to human chromosome 21 Genomics. 25: 73-84. PMID 7774958 DOI: 10.1016/0888-7543(95)80111-X  0.471
1995 Pekarsky Y, Zabarovsky E, Kashuba V, Drabkin H, Sandberg AA, Morgan R, Rynditch A, Gardiner K. Cloning of breakpoints in 3q21 associated with hematologic malignancy. Cancer Genetics and Cytogenetics. 80: 1-8. PMID 7697625 DOI: 10.1016/0165-4608(94)00168-B  0.407
1995 Xu H, Wei H, Tassone F, Graw S, Gardiner K, Weissman SM. A search for genes from the dark band regions of human chromosome 21. Genomics. 27: 1-8. PMID 7665155 DOI: 10.1006/Geno.1995.1001  0.462
1995 Lutfalla G, Holland SJ, Cinato E, Monneron D, Reboul J, Rogers NC, Smith JM, Stark GR, Gardiner K, Mogensen KE, Kerr IM, Uze G. Mutant U5A cells are complemented by an interferon-αβ receptor subunit generated by alternative processing of a new member of a cytokine receptor gene cluster Embo Journal. 14: 5100-5108. PMID 7588638 DOI: 10.1002/J.1460-2075.1995.Tb00192.X  0.383
1995 Gardiner K. Human genome organization Current Opinion in Genetics and Development. 5: 315-322. PMID 7549425 DOI: 10.1016/0959-437X(95)80045-X  0.416
1994 Williams RF, Pekarsky Y, Cheng S, Gardiner K. YAC clones targeting gene-rich regions of human Chromosome 3 Mammalian Genome. 5: 380-383. PMID 8043955 DOI: 10.1007/Bf00356559  0.464
1993 Cheng S, Lutfalla G, Uze G, Chumakov IM, Gardiner K. GART, SON, IFNAR, and CRF2-4 genes cluster on human chromosome 21 and mouse chromosome 16. Mammalian Genome. 4: 338-342. PMID 8318737 DOI: 10.1007/Bf00357094  0.438
1993 Lutfalla G, Gardiner K, Uze G. A new member of the cytokine receptor gene family maps on chromosome 21 at less than 35 kb from IFNAR Genomics. 16: 366-373. PMID 8314576 DOI: 10.1006/Geno.1993.1199  0.399
1992 Tassone F, Cheng S, Gardiner K. Analysis of chromosome 21 yeast artificial chromosome (YAC) clones American Journal of Human Genetics. 51: 1251-1264. PMID 1463009  0.387
1992 Wilcox AS, Warrington JA, Gardiner K, Berger R, Whiting P, Altherr MR, Wasmuth JJ, Patterson D, Sikela JM. Human chromosomal localization of genes encoding the gamma 1 and gamma 2 subunits of the gamma-aminobutyric acid receptor indicates that members of this gene family are often clustered in the genome. Proceedings of the National Academy of Sciences of the United States of America. 89: 5857-61. PMID 1321425 DOI: 10.1073/Pnas.89.13.5857  0.465
1991 Gao J, Erickson P, Gardiner K, Le Beau MM, Diaz MO, Patterson D, Rowley JD, Drabkin HA. Isolation of a yeast artificial chromosome spanning the 8;21 translocation breakpoint t(8;21)(q22;q22.3) in acute myelogenous leukemia Proceedings of the National Academy of Sciences of the United States of America. 88: 4882-4886. PMID 2052570 DOI: 10.1073/Pnas.88.11.4882  0.447
1991 Aïssani B, D'Onofrio G, Mouchiroud D, Gardiner K, Gautier C, Bernardi G. The compositional properties of human genes Journal of Molecular Evolution. 32: 493-503. PMID 1908020 DOI: 10.1007/Bf02102651  0.4
1990 Gardiner K, Aissani B, Bernardi G. A compositional map of human chromosome 21 Embo Journal. 9: 1853-1858. PMID 2347306 DOI: 10.1002/J.1460-2075.1990.Tb08310.X  0.402
1990 Gardiner K, Horisberger M, Kraus J, Tantravahi U, Korenberg J, Rao V, Reddy S, Patterson D. Analysis of human chromosome 21: correlation of physical and cytogenetic maps; gene and CpG island distributions. The Embo Journal. 9: 25-34. DOI: 10.1002/J.1460-2075.1990.Tb08076.X  0.451
1989 Gardiner K, Patterson D. Transverse alternating field electrophoresis and applications to mammalian genome mapping Electrophoresis. 10: 296-302. PMID 2670545 DOI: 10.1002/Elps.1150100505  0.329
1988 Gardiner K, Watkins P, Münke M, Drabkin H, Jones C, Patterson D. Partial physical map of human chromosome 21. Somatic Cell and Molecular Genetics. 14: 623-637. PMID 3194801 DOI: 10.1007/Bf01535316  0.465
1988 Patterson D, Gardiner K, Kao FT, Tanzi R, Watkins P, Gusella JF. Mapping of the gene encoding the beta-amyloid precursor protein and its relationship to the Down syndrome region of chromosome 21. Proceedings of the National Academy of Sciences of the United States of America. 85: 8266-70. PMID 2973063 DOI: 10.1073/Pnas.85.21.8266  0.435
1986 Gardiner K, Laas W, Patterson D. Fractionation of large mammalian DNA restriction fragments using vertical pulsed-field gradient gel electrophoresis Somatic Cell and Molecular Genetics. 12: 185-195. PMID 3008351 DOI: 10.1007/Bf01560665  0.312
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