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Scott J. Emrich - Publications

Affiliations: 
Computer Science and Engineering University of Notre Dame, Notre Dame, IN, United States 
Area:
Computer Science, Bioinformatics Biology, Information Technology
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74/134 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Ryazansky SS, Chen C, Potters M, Naumenko AN, Lukyanchikova V, Masri RA, Brusentsov II, Karagodin DA, Yurchenko AA, Dos Anjos VL, Haba Y, Rose NH, Hoffman J, Guo R, Menna T, ... ... Emrich S, et al. The chromosome-scale genome assembly for the West Nile vector Culex quinquefasciatus uncovers patterns of genome evolution in mosquitoes. Bmc Biology. 22: 16. PMID 38273363 DOI: 10.1186/s12915-024-01825-0  0.36
2023 Labbé F, Abdeladhim M, Abrudan J, Araki AS, Araujo RN, Arensburger P, Benoit JB, Brazil RP, Bruno RV, Bueno da Silva Rivas G, Carvalho de Abreu V, Charamis J, Coutinho-Abreu IV, da Costa-Latgé SG, Darby A, ... ... Emrich SJ, et al. Genomic analysis of two phlebotomine sand fly vectors of leishmania from the new and old World. Plos Neglected Tropical Diseases. 17: e0010862. PMID 37043542 DOI: 10.1371/journal.pntd.0010862  0.313
2023 Small ST, Costantini C, Sagnon N, Guelbeogo MW, Emrich SJ, Kern AD, Fontaine MC, Besansky NJ. Standing genetic variation and chromosome differences drove rapid ecotype formation in a major malaria mosquito. Proceedings of the National Academy of Sciences of the United States of America. 120: e2219835120. PMID 36881629 DOI: 10.1073/pnas.2219835120  0.332
2021 Nowling RJ, Behura SK, Halfon MS, Emrich SJ, Duman-Scheel M. PeakMatcher facilitates updated Aedes aegypti embryonic cis-regulatory element map. Hereditas. 158: 7. PMID 33509290 DOI: 10.1186/s41065-021-00172-2  0.368
2020 Faisal FE, Newaz K, Chaney JL, Li J, Emrich SJ, Clark PL, Milenković T. Author Correction: GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison. Scientific Reports. 10: 13455. PMID 32778675 DOI: 10.1038/S41598-020-69025-8  0.308
2020 Newaz K, Wright G, Piland J, Li J, Clark P, Emrich S, Milenković T. Network analysis of synonymous codon usage. Bioinformatics (Oxford, England). PMID 32609328 DOI: 10.1093/Bioinformatics/Btaa603  0.338
2020 Molik DC, Pfrender ME, Emrich SJ. Uncovering Effects from the Structure of Metabarcode Sequences for Metagenetic and Microbiome Analysis. Methods and Protocols. 3. PMID 32178466 DOI: 10.3390/mps3010022  0.355
2020 Waterhouse RM, Aganezov S, Anselmetti Y, Lee J, Ruzzante L, Reijnders MJMF, Feron R, Bérard S, George P, Hahn MW, Howell PI, Kamali M, Koren S, Lawson D, Maslen G, ... ... Emrich SJ, et al. Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies. Bmc Biology. 18: 1. PMID 31898513 DOI: 10.1186/S12915-019-0728-3  0.434
2019 Li X, Kumar S, McDew-White M, Haile M, Cheeseman IH, Emrich S, Button-Simons K, Nosten F, Kappe SHI, Ferdig MT, Anderson TJC, Vaughan AM. Genetic mapping of fitness determinants across the malaria parasite Plasmodium falciparum life cycle. Plos Genetics. 15: e1008453. PMID 31609965 DOI: 10.1371/Journal.Pgen.1008453  0.379
2018 Choudhury O, Chakrabarty A, Emrich SJ. HECIL: A Hybrid Error Correction Algorithm for Long Reads with Iterative Learning. Scientific Reports. 8: 9936. PMID 29967328 DOI: 10.1038/S41598-018-28364-3  0.35
2018 Ryan SF, Deines JM, Scriber JM, Pfrender ME, Jones SE, Emrich SJ, Hellmann JJ. Climate-mediated hybrid zone movement revealed with genomics, museum collection, and simulation modeling. Proceedings of the National Academy of Sciences of the United States of America. PMID 29463695 DOI: 10.1073/Pnas.1714950115  0.33
2018 Chen DZ, Emrich SJ, Zhu S. Inversion detection using PacBio long reads International Journal of Data Mining and Bioinformatics. 20: 230. DOI: 10.1504/Ijdmb.2018.10016078  0.346
2017 Zhu S, Chen DZ, Emrich SJ. Single molecule sequencing-guided scaffolding and correction of draft assemblies. Bmc Genomics. 18: 879. PMID 29244003 DOI: 10.1186/S12864-017-4271-8  0.486
2017 Faisal FE, Newaz K, Chaney JL, Li J, Emrich SJ, Clark PL, Milenković T. GRAFENE: Graphlet-based alignment-free network approach integrates 3D structural and sequence (residue order) data to improve protein structural comparison. Scientific Reports. 7: 14890. PMID 29097661 DOI: 10.1038/S41598-017-14411-Y  0.337
2017 Rodriguez A, Wright G, Emrich S, Clark PL. %MinMax: A Versatile Tool for Calculating and Comparing Synonymous Codon Usage and Its Impact on Protein Folding. Protein Science : a Publication of the Protein Society. PMID 29090506 DOI: 10.1002/Pro.3336  0.4
2017 Horsman ME, Marous DR, Li R, Oliver RA, Byun B, Emrich SJ, Boggess B, Townsend CA, Mobashery S. Whole-Genome Shotgun Sequencing and Comparison of Two β-Proteobacterial Species in Search of the Bulgecin Biosynthetic Cluster. Acs Chemical Biology. PMID 28937735 DOI: 10.1021/Acschembio.7B00687  0.354
2017 Adema CM, Hillier LW, Jones CS, Loker ES, Knight M, Minx P, Oliveira G, Raghavan N, Shedlock A, do Amaral LR, Arican-Goktas HD, Assis JG, Baba EH, Baron OL, Bayne CJ, ... ... Emrich S, et al. Corrigendum: Whole genome analysis of a schistosomiasis-transmitting freshwater snail. Nature Communications. 8: 16153. PMID 28832025 DOI: 10.1038/Ncomms16153  0.404
2017 Choudhury O, Chakrabarty A, Emrich SJ. Highly Accurate and Efficient Data-Driven Methods For Genotype Imputation. Ieee/Acm Transactions On Computational Biology and Bioinformatics. PMID 28574365 DOI: 10.1109/Tcbb.2017.2708701  0.332
2017 Konar A, Choudhury O, Bullis R, Fiedler L, Kruser JM, Stephens MT, Gailing O, Schlarbaum S, Coggeshall MV, Staton ME, Carlson JE, Emrich S, Romero-Severson J. High-quality genetic mapping with ddRADseq in the non-model tree Quercus rubra. Bmc Genomics. 18: 417. PMID 28558688 DOI: 10.1186/S12864-017-3765-8  0.375
2017 Adema CM, Hillier LW, Jones CS, Loker ES, Knight M, Minx P, Oliveira G, Raghavan N, Shedlock A, do Amaral LR, Arican-Goktas HD, Assis JG, Baba EH, Baron OL, Bayne CJ, ... ... Emrich S, et al. Whole genome analysis of a schistosomiasis-transmitting freshwater snail. Nature Communications. 8: 15451. PMID 28508897 DOI: 10.1038/Ncomms15451  0.388
2017 Chaney JL, Steele A, Carmichael R, Rodriguez A, Specht AT, Ngo K, Li J, Emrich S, Clark PL. Widespread position-specific conservation of synonymous rare codons within coding sequences. Plos Computational Biology. 13: e1005531. PMID 28475588 DOI: 10.1371/Journal.Pcbi.1005531  0.37
2016 Love RR, Steele AM, Coulibaly MB, Traore SF, Emrich SJ, Fontaine MC, Besansky NJ. Chromosomal inversions and ecotypic differentiation in Anopheles gambiae: the perspective from whole-genome sequencing. Molecular Ecology. PMID 27759895 DOI: 10.1111/Mec.13888  0.505
2016 Siwo G, Rider A, Tan A, Pinapati R, Emrich S, Chawla N, Ferdig M. Prediction of fine-tuned promoter activity from DNA sequence. F1000research. 5: 158. PMID 27347373 DOI: 10.12688/F1000Research.7485.1  0.378
2016 Behura SK, Sarro J, Li P, Mysore K, Severson DW, Emrich SJ, Duman-Scheel M. High-throughput cis-regulatory element discovery in the vector mosquito Aedes aegypti. Bmc Genomics. 17: 341. PMID 27161480 DOI: 10.1186/S12864-016-2468-X  0.423
2016 Hall AB, Papathanos PA, Sharma A, Cheng C, Akbari OS, Assour L, Bergman NH, Cagnetti A, Crisanti A, Dottorini T, Fiorentini E, Galizi R, Hnath J, Jiang X, Koren S, ... ... Emrich SJ, et al. Radical remodeling of the Y chromosome in a recent radiation of malaria mosquitoes. Proceedings of the National Academy of Sciences of the United States of America. PMID 27035980 DOI: 10.1073/Pnas.1525164113  0.417
2016 Mesquita RD, Vionette-Amaral RJ, Lowenberger C, Rivera-Pomar R, Monteiro FA, Minx P, Spieth J, Carvalho AB, Panzera F, Lawson D, Torres AQ, Ribeiro JMC, Sorgine MHF, Waterhouse RM, Montague MJ, ... ... Emrich SJ, et al. Erratum: Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection (Proceedings of the National Academy of Sciences of the United States of America (2015) 112 (14936-14941) DOI 10.1073/pnas.1506226112) Proceedings of the National Academy of Sciences of the United States of America. 113. PMID 26929356 DOI: 10.1073/Pnas.1600205113  0.344
2015 Mesquita RD, Vionette-Amaral RJ, Lowenberger C, Rivera-Pomar R, Monteiro FA, Minx P, Spieth J, Carvalho AB, Panzera F, Lawson D, Torres AQ, Ribeiro JM, Sorgine MH, Waterhouse RM, Montague MJ, ... ... Emrich SJ, et al. Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection. Proceedings of the National Academy of Sciences of the United States of America. 112: 14936-14941. PMID 26627243 DOI: 10.1073/Pnas.1506226112  0.48
2015 Egan SP, Ragland GJ, Assour L, Powell TH, Hood GR, Emrich S, Nosil P, Feder JL. Experimental evidence of genome-wide impact of ecological selection during early stages of speciation-with-gene-flow. Ecology Letters. PMID 26077935 DOI: 10.1111/Ele.12460  0.455
2015 Ramalho-Ortigão M, Coutinho-Abreu IV, Balbino VQ, Figueiredo CA, Mukbel R, Dayem H, Hanafi HA, El-Hossary SS, Fawaz Eel-D, Abo-Shehada M, Hoel DF, Stayback G, Wadsworth M, Shoue DA, Abrudan J, ... ... Emrich SJ, et al. Phlebotomus papatasi SP15: mRNA expression variability and amino acid sequence polymorphisms of field populations. Parasites & Vectors. 8: 298. PMID 26022221 DOI: 10.1186/S13071-015-0914-2  0.328
2015 Warren AS, Aurrecoechea C, Brunk B, Desai P, Emrich S, Giraldo-Calderón GI, Harb O, Hix D, Lawson D, Machi D, Mao C, McClelland M, Nordberg E, Shukla M, Vosshall LB, et al. RNA-Rocket: an RNA-Seq analysis resource for infectious disease research. Bioinformatics (Oxford, England). 31: 1496-8. PMID 25573919 DOI: 10.1093/Bioinformatics/Btv002  0.32
2015 Neafsey DE, Waterhouse RM, Abai MR, Aganezov SS, Alekseyev MA, Allen JE, Amon J, Arcà B, Arensburger P, Artemov G, Assour LA, Basseri H, Berlin A, Birren BW, Blandin SA, ... ... Emrich SJ, et al. Mosquito genomics. Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes. Science (New York, N.Y.). 347: 1258522. PMID 25554792 DOI: 10.1126/Science.1258522  0.503
2015 Giraldo-Calderón GI, Emrich SJ, MacCallum RM, Maslen G, Dialynas E, Topalis P, Ho N, Gesing S, Madey G, Collins FH, Lawson D. VectorBase: an updated bioinformatics resource for invertebrate vectors and other organisms related with human diseases. Nucleic Acids Research. 43: D707-13. PMID 25510499 DOI: 10.1093/Nar/Gku1117  0.421
2015 Fontaine MC, Pease JB, Steele A, Waterhouse RM, Neafsey DE, Sharakhov IV, Jiang X, Hall AB, Catteruccia F, Kakani E, Mitchell SN, Wu YC, Smith HA, Love RR, Lawniczak MK, ... ... Emrich SJ, et al. Mosquito genomics. Extensive introgression in a malaria vector species complex revealed by phylogenomics. Science (New York, N.Y.). 347: 1258524. PMID 25431491 DOI: 10.1126/Science.1258524  0.426
2015 Choudhury O, Hazekamp NL, Thain D, Emrich SJ. Accelerating comparative genomics workflows in a distributed environment with optimized data partitioning and workflow fusion Scalable Computing. 16: 53-69. DOI: 10.12694/Scpe.V16I1.1060  0.411
2015 Assour LA, Emrich SJ. Global maximum-parsimony based ancestral reconstruction with non-universal genes 2015 Ieee 5th International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2015. DOI: 10.1109/ICCABS.2015.7344716  0.343
2015 Aganezov S, Sitdykova N, Alekseyev MA, Neafsey DE, Christophides GK, Collins FH, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Howell PI, Kafatos FC, Lawson D, Muskavitch MAT, Waterhouse R, et al. Scaffold assembly based on genome rearrangement analysis Computational Biology and Chemistry. 57: 46-53. DOI: 10.1016/j.compbiolchem.2015.02.005  0.355
2015 Assour LA, Emrich SJ. Multi-genome synteny for assembly improvement Proceedings of the 7th International Conference On Bioinformatics and Computational Biology, Bicob 2015. 193-198.  0.401
2015 Steele A, Emrich SJ. PbSandwich: Scaffolding draft genomes with long reads Proceedings of the 7th International Conference On Bioinformatics and Computational Biology, Bicob 2015. 155-160.  0.323
2014 Jiang X, Peery A, Hall AB, Sharma A, Chen XG, Waterhouse RM, Komissarov A, Riehle MM, Shouche Y, Sharakhova MV, Lawson D, Pakpour N, Arensburger P, Davidson VL, Eiglmeier K, ... Emrich S, et al. Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi. Genome Biology. 15: 459. PMID 25244985 DOI: 10.1186/S13059-014-0459-2  0.334
2014 Zhang W, Zeng E, Liu D, Jones SE, Emrich S. Mapping genomic features to functional traits through microbial whole genome sequences. International Journal of Bioinformatics Research and Applications. 10: 461-78. PMID 24989863 DOI: 10.1504/Ijbra.2014.062995  0.462
2014 Thrasher A, Musgrave Z, Kachmarck B, Thain D, Emrich S. Scaling up genome annotation using MAKER and work queue International Journal of Bioinformatics Research and Applications. 10: 447-460. PMID 24989862 DOI: 10.1504/Ijbra.2014.062994  0.447
2014 Dugan VG, Emrich SJ, Giraldo-Calderón GI, Harb OS, Newman RM, Pickett BE, Schriml LM, Stockwell TB, Stoeckert CJ, Sullivan DE, Singh I, Ward DV, Yao A, Zheng J, Barrett T, et al. Standardized metadata for human pathogen/vector genomic sequences. Plos One. 9: e99979. PMID 24936976 DOI: 10.1371/Journal.Pone.0099979  0.488
2014 O'Neil ST, Dzurisin JD, Williams CM, Lobo NF, Higgins JK, Deines JM, Carmichael RD, Zeng E, Tan JC, Wu GC, Emrich SJ, Hellmann JJ. Gene expression in closely related species mirrors local adaptation: consequences for responses to a warming world. Molecular Ecology. 23: 2686-98. PMID 24766086 DOI: 10.1111/Mec.12773  0.69
2014 Geng P, Li W, Lin L, de Miranda JR, Emrich S, An L, Terenius O. Genetic characterization of a novel Iflavirus associated with vomiting disease in the Chinese oak silkmoth Antheraea pernyi. Plos One. 9: e92107. PMID 24637949 DOI: 10.1371/Journal.Pone.0092107  0.38
2014 Livermore JA, Emrich SJ, Tan J, Jones SE. Freshwater bacterial lifestyles inferred from comparative genomics. Environmental Microbiology. 16: 746-58. PMID 23889754 DOI: 10.1111/1462-2920.12199  0.493
2014 Choudhury O, Hazekamp NL, Thain D, Emrich S. Accelerating comparative genomics workflows in a distributed environment with optimized data partitioning Proceedings - 14th Ieee/Acm International Symposium On Cluster, Cloud, and Grid Computing, Ccgrid 2014. 711-719. DOI: 10.1109/CCGrid.2014.79  0.313
2014 Lanc I, Bui P, Thain D, Emrich S. Adapting bioinformatics applications for heterogeneous systems: A case study Concurrency Computation Practice and Experience. 26: 866-877. DOI: 10.1002/Cpe.2927  0.311
2013 Evans JD, Brown SJ, Hackett KJJ, Robinson G, Richards S, Lawson D, Elsik C, Coddington J, Edwards O, Emrich S, Gabaldon T, Goldsmith M, Hanes G, Misof B, Muñoz-Torres M, et al. The i5K initiative: Advancing arthropod genomics for knowledge, human health, agriculture, and the environment Journal of Heredity. 104: 595-600. PMID 23940263 DOI: 10.1093/Jhered/Est050  0.446
2013 Bradnam KR, Fass JN, Alexandrov A, Baranay P, Bechner M, Birol I, Boisvert S, Chapman JA, Chapuis G, Chikhi R, Chitsaz H, Chou WC, Corbeil J, Del Fabbro C, Docking TR, ... ... Emrich S, et al. Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species. Gigascience. 2: 10. PMID 23870653 DOI: 10.1186/2047-217X-2-10  0.527
2013 O'Neil ST, Emrich SJ. Assessing De Novo transcriptome assembly metrics for consistency and utility. Bmc Genomics. 14: 465. PMID 23837739 DOI: 10.1186/1471-2164-14-465  0.712
2013 Neafsey DE, Christophides GK, Collins FH, Emrich SJ, Fontaine MC, Gelbart W, Hahn MW, Howell PI, Kafatos FC, Lawson D, Muskavitch MA, Waterhouse RM, Williams LJ, Besansky NJ. The evolution of the Anopheles 16 genomes project. G3 (Bethesda, Md.). 3: 1191-4. PMID 23708298 DOI: 10.1534/G3.113.006247  0.512
2013 Abrudan J, Ramalho-Ortigão M, O'Neil S, Stayback G, Wadsworth M, Bernard M, Shoue D, Emrich S, Lawyer P, Kamhawi S, Rowton ED, Lehane MJ, Bates PA, Valenzeula JG, Tomlinson C, et al. The characterization of the Phlebotomus papatasi transcriptome. Insect Molecular Biology. 22: 211-32. PMID 23398403 DOI: 10.1111/Imb.12015  0.743
2012 O'Neil ST, Emrich SJ. Haplotype and minimum-chimerism consensus determination using short sequence data. Bmc Genomics. 13: S4. PMID 22537299 DOI: 10.1186/1471-2164-13-S2-S4  0.735
2012 Megy K, Emrich SJ, Lawson D, Campbell D, Dialynas E, Hughes DS, Koscielny G, Louis C, Maccallum RM, Redmond SN, Sheehan A, Topalis P, Wilson D. VectorBase: improvements to a bioinformatics resource for invertebrate vector genomics. Nucleic Acids Research. 40: D729-34. PMID 22135296 DOI: 10.1093/Nar/Gkr1089  0.459
2012 Moretti C, Thrasher A, Yu L, Olson M, Emrich S, Thain D. A framework for scalable genome assembly on clusters, clouds, and grids Ieee Transactions On Parallel and Distributed Systems. 23: 2189-2197. DOI: 10.1109/Tpds.2012.80  0.42
2012 Thrasher A, Thain D, Emrich S, Musgrave Z. Shifting the bioinformatics computing paradigm: A case study in parallelizing genome annotation using MAKER and Work Queue 2012 Ieee 2nd International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2012. DOI: 10.1109/ICCABS.2012.6182647  0.301
2011 Samarakoon U, Regier A, Tan A, Desany BA, Collins B, Tan JC, Emrich SJ, Ferdig MT. High-throughput 454 resequencing for allele discovery and recombination mapping in Plasmodium falciparum. Bmc Genomics. 12: 116. PMID 21324207 DOI: 10.1186/1471-2164-12-116  0.769
2010 Lobo NF, Sangaré DM, Regier AA, Reidenbach KR, Bretz DA, Sharakhova MV, Emrich SJ, Traore SF, Costantini C, Besansky NJ, Collins FH. Breakpoint structure of the Anopheles gambiae 2Rb chromosomal inversion. Malaria Journal. 9: 293. PMID 20974007 DOI: 10.1186/1475-2875-9-293  0.762
2010 Lawniczak MK, Emrich SJ, Holloway AK, Regier AP, Olson M, White B, Redmond S, Fulton L, Appelbaum E, Godfrey J, Farmer C, Chinwalla A, Yang SP, Minx P, Nelson J, et al. Widespread divergence between incipient Anopheles gambiae species revealed by whole genome sequences. Science (New York, N.Y.). 330: 512-4. PMID 20966253 DOI: 10.1126/Science.1195755  0.496
2010 Rider AK, Siwo G, Chawla NV, Ferdig M, Emrich SJ. A statistical approach to finding overlooked genetic associations. Bmc Bioinformatics. 11: 526. PMID 20964847 DOI: 10.1186/1471-2105-11-526  0.403
2010 O'Neil ST, Dzurisin JD, Carmichael RD, Lobo NF, Emrich SJ, Hellmann JJ. Population-level transcriptome sequencing of nonmodel organisms Erynnis propertius and Papilio zelicaon. Bmc Genomics. 11: 310. PMID 20478048 DOI: 10.1186/1471-2164-11-310  0.735
2010 Liu S, Chen HD, Makarevitch I, Shirmer R, Emrich SJ, Dietrich CR, Barbazuk WB, Springer NM, Schnable PS. High-throughput genetic mapping of mutants via quantitative single nucleotide polymorphism typing. Genetics. 184: 19-26. PMID 19884313 DOI: 10.1534/Genetics.109.107557  0.333
2009 Schnable PS, Ware D, Fulton RS, Stein JC, Wei F, Pasternak S, Liang C, Zhang J, Fulton L, Graves TA, Minx P, Reily AD, Courtney L, Kruchowski SS, Tomlinson C, ... ... Emrich SJ, et al. The B73 maize genome: complexity, diversity, and dynamics. Science (New York, N.Y.). 326: 1112-5. PMID 19965430 DOI: 10.1126/Science.1178534  0.735
2009 Regier A, Olson M, Emrich SJ. Alignment and analysis of closely related genomes Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 5462: 343-352. DOI: 10.1007/978-3-642-00727-9_32  0.416
2007 Barbazuk WB, Emrich S, Schnable PS. SNP Mining from Maize 454 EST Sequences. Csh Protocols. 2007: pdb.prot4786. PMID 21357124 DOI: 10.1101/Pdb.Prot4786  0.409
2007 Ohtsu K, Smith MB, Emrich SJ, Borsuk LA, Zhou R, Chen T, Zhang X, Timmermans MC, Beck J, Buckner B, Janick-Buckner D, Nettleton D, Scanlon MJ, Schnable PS. Global gene expression analysis of the shoot apical meristem of maize (Zea mays L.). The Plant Journal : For Cell and Molecular Biology. 52: 391-404. PMID 17764504 DOI: 10.1111/J.1365-313X.2007.03244.X  0.359
2007 Barbazuk WB, Emrich SJ, Chen HD, Li L, Schnable PS. SNP discovery via 454 transcriptome sequencing. The Plant Journal : For Cell and Molecular Biology. 51: 910-8. PMID 17662031 DOI: 10.1111/J.1365-313X.2007.03193.X  0.423
2007 Emrich SJ, Li L, Wen TJ, Yandeau-Nelson MD, Fu Y, Guo L, Chou HH, Aluru S, Ashlock DA, Schnable PS. Nearly identical paralogs: implications for maize (Zea mays L.) genome evolution. Genetics. 175: 429-39. PMID 17110490 DOI: 10.1534/Genetics.106.064006  0.735
2007 Emrich SJ, Barbazuk WB, Li L, Schnable PS. Gene discovery and annotation using LCM-454 transcriptome sequencing. Genome Research. 17: 69-73. PMID 17095711 DOI: 10.1101/Gr.5145806  0.481
2007 Kalyanaraman A, Emrich SJ, Schnable PS, Aluru S. Assembling genomes on large-scale parallel computers Journal of Parallel and Distributed Computing. 67: 1240-1255. DOI: 10.1016/J.Jpdc.2007.05.014  0.546
2005 Fu Y, Emrich SJ, Guo L, Wen TJ, Ashlock DA, Aluru S, Schnable PS. Quality assessment of maize assembled genomic islands (MAGIs) and large-scale experimental verification of predicted genes. Proceedings of the National Academy of Sciences of the United States of America. 102: 12282-7. PMID 16103354 DOI: 10.1073/Pnas.0503394102  0.752
2005 Yao H, Guo L, Fu Y, Borsuk LA, Wen TJ, Skibbe DS, Cui X, Scheffler BE, Cao J, Emrich SJ, Ashlock DA, Schnable PS. Evaluation of five ab initio gene prediction programs for the discovery of maize genes. Plant Molecular Biology. 57: 445-60. PMID 15830133 DOI: 10.1007/S11103-005-0271-1  0.356
2004 Emrich SJ, Aluru S, Fu Y, Wen TJ, Narayanan M, Guo L, Ashlock DA, Schnable PS. A strategy for assembling the maize (Zea mays L.) genome. Bioinformatics (Oxford, England). 20: 140-7. PMID 14734303 DOI: 10.1093/Bioinformatics/Bth017  0.736
2003 Emrich SJ, Lowe M, Delcher AL. PROBEmer: A web-based software tool for selecting optimal DNA oligos. Nucleic Acids Research. 31: 3746-50. PMID 12824409 DOI: 10.1093/Nar/Gkg569  0.326
Low-probability matches (unlikely to be authored by this person)
2009 Moretti C, Olson M, Emrich S, Thain D. Highly scalable genome assembly on campus grids Proceedings of the 2nd Acm Workshop On Many-Task Computing On Grids and Supercomputers 2009, Mtags '09. DOI: 10.1145/1646468.1646480  0.295
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. PpSP44 nucleotide and amino acid variation. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S037  0.286
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. PpSP42 nucleotide and amino acid variation. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S034  0.286
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. PpSP36 nucleotide and amino acid variation. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S031  0.286
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. PpSP32 nucleotide and amino acid variation. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S028  0.286
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. PpSP30 nucleotide and amino acid variation. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S025  0.286
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. PpSP29 nucleotide and amino acid variation. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S022  0.286
2011 O'Neil ST, Emrich SJ. Robust haplotype reconstruction of eukaryotic read data with Hapler 2011 Ieee 1st International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2011. 141-146. DOI: 10.1109/ICCABS.2011.5729869  0.274
2012 Zhang W, Zeng E, Liu D, Jones S, Emrich S. A machine learning framework for trait based genomics 2012 Ieee 2nd International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2012. DOI: 10.1109/ICCABS.2012.6182648  0.272
2015 Mbengue A, Bhattacharjee S, Pandharkar T, Liu H, Estiu G, Stahelin RV, Rizk SS, Njimoh DL, Ryan Y, Chotivanich K, Nguon C, Ghorbal M, Lopez-Rubio JJ, Pfrender M, Emrich S, et al. A molecular mechanism of artemisinin resistance in Plasmodium falciparum malaria. Nature. 520: 683-7. PMID 25874676 DOI: 10.1038/Nature14412  0.268
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. Median-joining network for PpSP44 P. papatasi haplotypes. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S038  0.266
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. Median-joining network for PpSP42 P. papatasi haplotypes. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S035  0.266
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. Median-joining network for PpSP36 P. papatasi haplotypes. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S032  0.266
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. Median-joining network for PpSP32 P. papatasi haplotypes. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S029  0.266
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. Median-joining network for PpSP30 P. papatasi haplotypes. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S026  0.266
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. Median-joining network for PpSP29 P. papatasi haplotypes. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S023  0.266
2011 Carmichael R, Braga-Henebry P, Thain D, Emrich S. Biocompute 2.0: An improved collaborative workspace for data intensive bio-science Concurrency Computation Practice and Experience. 23: 2305-2314. DOI: 10.1002/Cpe.1782  0.265
2014 Tomchaney M, Mysore K, Sun L, Li P, Emrich SJ, Severson DW, Duman-Scheel M. Examination of the genetic basis for sexual dimorphism in the Aedes aegypti (dengue vector mosquito) pupal brain. Biology of Sex Differences. 5: 10. PMID 25729562 DOI: 10.1186/S13293-014-0010-X  0.25
2021 Olafson PU, Aksoy S, Attardo GM, Buckmeier G, Chen X, Coates CJ, Davis M, Dykema J, Emrich SJ, Friedrich M, Holmes CJ, Ioannidis P, Jansen EN, Jennings EC, Lawson D, et al. Publisher Correction: The genome of the stable fly, Stomoxys calcitrans, reveals potential mechanisms underlying reproduction, host interactions, and novel targets for pest control. Bmc Biology. 19: 150. PMID 34325695 DOI: 10.1186/s12915-021-01098-x  0.243
2014 Rider AK, Milenković T, Siwo GH, Pinapati RS, Emrich SJ, Ferdig MT, Chawla NV. Networks' Characteristics Matter for Systems Biology. Network Science (Cambridge University Press). 2: 139-161. PMID 26500772 DOI: 10.1017/Nws.2014.13  0.24
2018 Hazekamp N, Kremer-Herman N, Tovar B, Meng H, Choudhury O, Emrich S, Thain D. Combining Static and Dynamic Storage Management for Data Intensive Scientific Workflows Ieee Transactions On Parallel and Distributed Systems. 29: 338-350. DOI: 10.1109/Tpds.2017.2764897  0.239
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. PpSP44 sliding window analysis. Plos Neglected Tropical Diseases. DOI: 10.1371/Journal.Pntd.0007489.S020  0.239
2010 Yu L, Moretti C, Thrasher A, Emrich S, Judd K, Thain D. Harnessing parallelism in multicore clusters with the All-Pairs, Wavefront, and Makeflow abstractions Cluster Computing. 13: 243-256. DOI: 10.1007/S10586-010-0134-7  0.238
2013 Zhang W, Zeng E, Emrich SJ, Livermore J, Liu D, Jones SE. Predicting bacterial functional traits from whole genome sequences using random forest 2013 Ieee 3rd International Conference On Computational Advances in Bio and Medical Sciences, Iccabs 2013. DOI: 10.1109/ICCABS.2013.6629212  0.236
2002 Lowe M, Madsen EL, Schindler K, Smith C, Emrich S, Robb F, Halden RU. Geochemistry and microbial diversity of a trichloroethene-contaminated Superfund site undergoing intrinsic in situ reductive dechlorination. Fems Microbiology Ecology. 40: 123-34. PMID 19709219 DOI: 10.1111/J.1574-6941.2002.Tb00944.X  0.224
2020 Nowling RJ, Manke KR, Emrich SJ. Detecting inversions with PCA in the presence of population structure. Plos One. 15: e0240429. PMID 33119626 DOI: 10.1371/journal.pone.0240429  0.222
2021 Schlum KA, Lamour K, de Bortoli CP, Banerjee R, Meagher R, Pereira E, Murua MG, Sword GA, Tessnow AE, Viteri Dillon D, Linares Ramirez AM, Akutse KS, Schmidt-Jeffris R, Huang F, Reisig D, ... Emrich SJ, et al. Whole genome comparisons reveal panmixia among fall armyworm (Spodoptera frugiperda) from diverse locations. Bmc Genomics. 22: 179. PMID 33711916 DOI: 10.1186/s12864-021-07492-7  0.22
2021 Wright G, Rodriguez A, Li J, Milenkovic T, Emrich SJ, Clark PL. CHARMING: Harmonizing synonymous codon usage to replicate a desired codon usage pattern. Protein Science : a Publication of the Protein Society. PMID 34738275 DOI: 10.1002/pro.4223  0.216
2018 Wiltshire RM, Bergey CM, Kayondo JK, Birungi J, Mukwaya LG, Emrich SJ, Besansky NJ, Collins FH. Reduced-representation sequencing identifies small effective population sizes of Anopheles gambiae in the north-western Lake Victoria basin, Uganda. Malaria Journal. 17: 285. PMID 30081911 DOI: 10.1186/S12936-018-2432-0  0.215
2020 Wright G, Rodriguez A, Li J, Clark PL, Milenković T, Emrich SJ. Analysis of computational codon usage models and their association with translationally slow codons. Plos One. 15: e0232003. PMID 32352987 DOI: 10.1371/Journal.Pone.0232003  0.214
2019 Wright G, Rodriguez A, Clark PL, Emrich S. A New Look at Codon Usage and Protein Expression. Epic Series in Computing. 60: 104-112. PMID 35342824 DOI: 10.29007/d4tz  0.202
2021 Schlum K, Lamour K, Tandy P, Emrich SJ, de Bortoli CP, Rao T, Viteri Dillon DM, Linares-Ramirez AM, Jurat-Fuentes JL. Genetic Screening to Identify Candidate Resistance Alleles to Cry1F Corn in Fall Armyworm Using Targeted Sequencing. Insects. 12. PMID 34357278 DOI: 10.3390/insects12070618  0.2
2021 Olafson PU, Aksoy S, Attardo GM, Buckmeier G, Chen X, Coates CJ, Davis M, Dykema J, Emrich SJ, Friedrich M, Holmes CJ, Ioannidis P, Jansen EN, Jennings EC, Lawson D, et al. The genome of the stable fly, Stomoxys calcitrans, reveals potential mechanisms underlying reproduction, host interactions, and novel targets for pest control. Bmc Biology. 19: 41. PMID 33750380 DOI: 10.1186/s12915-021-00975-9  0.199
2013 Rider AK, Chawla NV, Emrich SJ. A survey of current integrative network algorithms for systems biology Systems Biology. 1: 479-495. DOI: 10.1007/978-94-007-6803-1_17  0.191
2020 Flanley CM, Ramalho-Ortigao M, Coutinho-Abreu IV, Mukbel R, Hanafi HA, El-Hossary SS, Fawaz EY, Hoel DF, Bray AW, Stayback G, Shoue DA, Kamhawi S, Emrich S, McDowell MA. Phlebotomus papatasi sand fly predicted salivary protein diversity and immune response potential based on in silico prediction in Egypt and Jordan populations. Plos Neglected Tropical Diseases. 14: e0007489. PMID 32658913 DOI: 10.1371/Journal.Pntd.0007489  0.182
2023 Tandy P, Lamour K, Placidi de Bortoli C, Nagoshi R, Emrich SJ, Jurat-Fuentes JL. Screening for resistance alleles to Cry1 proteins through targeted sequencing in the native and invasive range of Spodoptera frugiperda (Lepidoptera: Noctuidae). Journal of Economic Entomology. 116: 935-944. PMID 37311017 DOI: 10.1093/jee/toad061  0.181
2014 Hazekamp N, Choudhury O, Gesing S, Emrich S, Thain D. Expanding tasks of logical workflows into independent workflows for improved scalability Proceedings - 14th Ieee/Acm International Symposium On Cluster, Cloud, and Grid Computing, Ccgrid 2014. 548-549. DOI: 10.1109/CCGrid.2014.84  0.18
2017 Schieffer KM, Choi CS, Emrich S, Harris L, Deiling S, Karamchandani DM, Salzberg A, Kawasawa YI, Yochum GS, Koltun WA. RNA-seq implicates deregulation of the immune system in the pathogenesis of diverticulitis. American Journal of Physiology. Gastrointestinal and Liver Physiology. ajpgi.00136.2017. PMID 28619727 DOI: 10.1152/Ajpgi.00136.2017  0.178
2021 Button-Simons KA, Kumar S, Carmago N, Haile MT, Jett C, Checkley LA, Kennedy SY, Pinapati RS, Shoue DA, McDew-White M, Li X, Nosten FH, Kappe SH, Anderson TJC, Romero-Severson J, ... ... Emrich SJ, et al. The power and promise of genetic mapping from Plasmodium falciparum crosses utilizing human liver-chimeric mice. Communications Biology. 4: 734. PMID 34127785 DOI: 10.1038/s42003-021-02210-1  0.165
2019 Rund SSC, Braak K, Cator L, Copas K, Emrich SJ, Giraldo-Calderón GI, Johansson MA, Heydari N, Hobern D, Kelly SA, Lawson D, Lord C, MacCallum RM, Roche DG, Ryan SJ, et al. MIReAD, a minimum information standard for reporting arthropod abundance data. Scientific Data. 6: 40. PMID 31024009 DOI: 10.1038/S41597-019-0042-5  0.163
2019 Zhu S, Emrich SJ, Chen DZ. Predicting Local Inversions Using Rectangle Clustering and Representative Rectangle Prediction. Ieee Transactions On Nanobioscience. PMID 31180865 DOI: 10.1109/Tnb.2019.2915060  0.162
2023 Sword TT, Dinglasan JLN, Abbas GSK, William Barker J, Spradley ME, Greene ER, Gooden DS, Emrich SJ, Gilchrist MA, Doktycz MJ, Bailey CB. Profiling Expression Strategies for a Type III Polyketide Synthase in a Lysate-Based, Cell-free System. Biorxiv : the Preprint Server For Biology. PMID 38077034 DOI: 10.1101/2023.11.30.569483  0.159
2010 Carmichael R, Braga-Henebry P, Thain D, Emrich S. Biocompute: Towards a collaborative workspace for data intensive bio-science Hpdc 2010 - Proceedings of the 19th Acm International Symposium On High Performance Distributed Computing. 489-498. DOI: 10.1145/1851476.1851547  0.158
2018 Nowling RJ, Emrich SJ. Adjusted likelihood-ratio test for variants with unknown genotypes. Journal of Bioinformatics and Computational Biology. 16: 1840020. PMID 30419783 DOI: 10.1142/S0219720018400206  0.138
2022 Nowling RJ, Fallas-Moya F, Sadovnik A, Emrich S, Aleck M, Leskiewicz D, Peters JG. Fast, low-memory detection and localization of large, polymorphic inversions from SNPs. Peerj. 10: e12831. PMID 35116204 DOI: 10.7717/peerj.12831  0.138
2010 Rider A, Siwo G, Emrich S, Ferdig M, Chawla NV. A supervised learning approach to the unsupervised clustering of genes Proceedings - 2010 Ieee International Conference On Bioinformatics and Biomedicine, Bibm 2010. 323-328. DOI: 10.1109/BIBM.2010.5706585  0.136
2015 Hazekamp N, Sarro J, Choudhury O, Gesing S, Emrich S, Thain D. Scaling up bioinformatics workflows with dynamic job expansion: A case study using galaxy and makeflow Proceedings - 11th Ieee International Conference On Escience, Escience 2015. 332-341. DOI: 10.1109/eScience.2015.39  0.125
2017 Li K, Hayden K, Wadman E, Bhagat S, Emrich S, Jacobstein D, Gasink C, Brodmerkel C. DOP052 Molecular response to ustekinumab in moderate-to-severe Crohn's disease by serum protein and biopsy gene expression analysis: results from Ustekinumab phase 3 studies Journal of Crohn's and Colitis. 11: S57-S58. DOI: 10.1093/ecco-jcc/jjx002.089  0.121
2010 Thrasher A, Carmichael R, Bui P, Yu L, Thain D, Emrich S. Taming complex bioinformatics workflows with weaver, makeflow, and starch 2010 5th Workshop On Workflows in Support of Large-Scale Science, Works 2010. DOI: 10.1109/WORKS.2010.5671858  0.12
2014 Rider AK, Siwo G, Emrich SJ, Ferdig MT, Chawla NV. A supervised learning approach to the ensemble clustering of genes. International Journal of Data Mining and Bioinformatics. 9: 199-219. PMID 24864378 DOI: 10.1504/IJDMB.2014.059062  0.119
2022 Newaz K, Piland J, Clark PL, Emrich SJ, Li J, Milenković T. Multi-layer sequential network analysis improves protein 3D structural classification. Proteins. PMID 35441395 DOI: 10.1002/prot.26349  0.118
2013 Rajan D, Thrasher A, Abdul-Wahid B, Izaguirre JA, Emrich S, Thain D. Case studies in designing elastic applications Proceedings - 13th Ieee/Acm International Symposium On Cluster, Cloud, and Grid Computing, Ccgrid 2013. 466-473. DOI: 10.1109/CCGrid.2013.46  0.105
2015 Choudhury O, Rajan D, Hazekamp N, Gesing S, Thain D, Emrich S. Balancing thread-level and task-level parallelism for data-intensive workloads on clusters and clouds Proceedings - Ieee International Conference On Cluster Computing, Iccc. 2015: 390-393. DOI: 10.1109/CLUSTER.2015.60  0.103
2009 Yu L, Moretti C, Emrich S, Judd K, Thain D. Harnessing parallelism in multicore clusters with the all-pairs and wavefront abstractions Proc. 18th Acm International Symposium On High Performance Distributed Computing, Hpdc 09, Co-Located With the 2009 International Symposium On High Performance Distributed Computing Conf., Hpdc'09. 1-10. DOI: 10.1145/1551609.1551613  0.093
2004 Ashlock DA, Emrich SJ, Bryden KM, Corns SM, Wen TJ, Schnable PS. A comparison of evolved finite state classifiers and interpolated Markov models for improving PCR primer design Proceedings of the 2004 Ieee Symposium On Computational Intelligence in Bioinformatics and Computational Biology, Cibcb'04. 190-197.  0.079
2018 Li L, Cheng Y, Emrich S, Schorey J. Activation of endothelial cells by extracellular vesicles derived from Mycobacterium tuberculosis infected macrophages or mice. Plos One. 13: e0198337. PMID 29851993 DOI: 10.1371/Journal.Pone.0198337  0.067
2010 Zhang W, Emrich S, Zeng E. A two-stage machine learning approach for pathway analysis Proceedings - 2010 Ieee International Conference On Bioinformatics and Biomedicine, Bibm 2010. 274-279. DOI: 10.1109/BIBM.2010.5706576  0.04
2024 Lee L, Yoast R, Emrich S, Trebak M, Kirk V, Sneyd J. Emergence of broad cytosolic Ca oscillations in the absence of CRAC channels: A model for CRAC-mediated negative feedback on PLC and Ca oscillations through PKC. Journal of Theoretical Biology. 581: 111740. PMID 38253220 DOI: 10.1016/j.jtbi.2024.111740  0.022
2005 Delmonico FL, Aufses A, Bozorgzadeh A, Delgado-Vega D, Distant DA, Dubler NN, Emre S, Feng S, Freeman RB, Fung JJ, Gordon FD, Hasz RD, Kinkhabwala M, Lake JR, Merion RM, ... ... Emrich S, et al. Workgroup on expanded criteria organs for liver transplantation Liver Transplantation. 11: 1184-1192. PMID 16184565 DOI: 10.1002/Lt.20569  0.018
2019 Zhang X, Pathak T, Yoast R, Emrich S, Xin P, Nwokonko RM, Johnson M, Wu S, Delierneux C, Gueguinou M, Hempel N, Putney JW, Gill DL, Trebak M. A calcium/cAMP signaling loop at the ORAI1 mouth drives channel inactivation to shape NFAT induction. Nature Communications. 10: 1971. PMID 31036819 DOI: 10.1038/S41467-019-09593-0  0.017
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