Rafal Kustra - Publications

Affiliations: 
Dalla Lana School of Public Health University of Toronto, Toronto, ON, Canada 
Area:
Biostatistics Biology, Statistics, Computer Science

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Oh G, Wang SC, Pal M, Chen ZF, Khare T, Tochigi M, Ng C, Yang YA, Kwan A, Kaminsky ZA, Mill J, Gunasinghe C, Tackett JL, Gottesman II, Willemsen G, ... ... Kustra R, et al. DNA modification study of major depressive disorder: beyond locus-by-locus comparisons. Biological Psychiatry. 77: 246-55. PMID 25108803 DOI: 10.1016/j.biopsych.2014.06.016  0.92
2013 Chang B, Kustra R, Tian W. Functional-network-based gene set analysis using gene-ontology. Plos One. 8: e55635. PMID 23418449 DOI: 10.1371/journal.pone.0055635  0.92
2013 Chang B, Kruger U, Kustra R, Zhang J. Canonical correlation analysis based on Hilbert-Schmidt independence criterion and centered Kernel target alignment 30th International Conference On Machine Learning, Icml 2013. 975-983.  0.92
2012 Khare T, Pai S, Koncevicius K, Pal M, Kriukiene E, Liutkeviciute Z, Irimia M, Jia P, Ptak C, Xia M, Tice R, Tochigi M, Moréra S, Nazarians A, Belsham D, ... ... Kustra R, et al. 5-hmC in the brain is abundant in synaptic genes and shows differences at the exon-intron boundary. Nature Structural & Molecular Biology. 19: 1037-43. PMID 22961382 DOI: 10.1038/nsmb.2372  0.92
2012 Howell D, Husain A, Seow H, Liu Y, Kustra R, Atzema C, Dudgeon D, Earle C, Sussman J, Barbera L. Symptom clusters in a population-based ambulatory cancer cohort validated using bootstrap methods. European Journal of Cancer (Oxford, England : 1990). 48: 3073-81. PMID 22633749 DOI: 10.1016/j.ejca.2012.04.008  0.92
2010 Hawken SJ, Greenwood CM, Hudson TJ, Kustra R, McLaughlin J, Yang Q, Zanke BW, Little J. The utility and predictive value of combinations of low penetrance genes for screening and risk prediction of colorectal cancer. Human Genetics. 128: 89-101. PMID 20437058 DOI: 10.1007/s00439-010-0828-1  0.92
2010 Kustra R, Zagdański A. Data-fusion in clustering microarray data: balancing discovery and interpretability. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 7: 50-63. PMID 20150668 DOI: 10.1109/TCBB.2007.70267  0.92
2009 Kowgier M, Kustra R. Continuous-time hidden Markov models for the copy number analysis of genotyping arrays Proceedings of the Iadis European Conference On Data Mining 2009, Ecdm'09 Part of the Iadis Multi Conference On Computer Science and Information Systems, McCsis 2009. 43-49.  0.92
2008 Lee SS, Sun L, Kustra R, Bull SB. EM-random forest and new measures of variable importance for multi-locus quantitative trait linkage analysis. Bioinformatics (Oxford, England). 24: 1603-10. PMID 18499695 DOI: 10.1093/bioinformatics/btn239  0.92
2008 Tenesa A, Farrington SM, Prendergast JG, Porteous ME, Walker M, Haq N, Barnetson RA, Theodoratou E, Cetnarskyj R, Cartwright N, Semple C, Clark AJ, Reid FJ, Smith LA, Kavoussanakis K, ... ... Kustra R, et al. Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21. Nature Genetics. 40: 631-7. PMID 18372901 DOI: 10.1038/ng.133  0.92
2008 Kustra R, Shi X, Murdoch DJ, Greenwood CM, Rangrej J. Efficient p-value estimation in massively parallel testing problems. Biostatistics (Oxford, England). 9: 601-12. PMID 18304995 DOI: 10.1093/biostatistics/kxm053  0.92
2008 Zagdański A, Kustra R. Exploration of high-dimensional time series using regularized reduced rank approach: Application in time-course microarray data analysis McCsis'08 - Iadis Multi Conference On Computer Science and Information Systems; Proceedings of Informatics 2008 and Data Mining 2008. 129-133.  0.92
2007 Zanke BW, Greenwood CM, Rangrej J, Kustra R, Tenesa A, Farrington SM, Prendergast J, Olschwang S, Chiang T, Crowdy E, Ferretti V, Laflamme P, Sundararajan S, Roumy S, Olivier JF, et al. Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24. Nature Genetics. 39: 989-94. PMID 17618283 DOI: 10.1038/ng2089  0.92
2006 Kustra R, Shioda R, Zhu M. A factor analysis model for functional genomics. Bmc Bioinformatics. 7: 216. PMID 16630343 DOI: 10.1186/1471-2105-7-216  0.92
2006 Kustra R. Reduced-rank regularized multivariate model for high-dimensional data Journal of Computational and Graphical Statistics. 15: 312-338. DOI: 10.1198/016214506X112416  0.92
2006 Kustra R, Zagdański A. Incorporating Gene Ontology in clustering gene expression data Proceedings - Ieee Symposium On Computer-Based Medical Systems. 2006: 555-560. DOI: 10.1109/CBMS.2006.100  0.92
2004 Liu H, Kustra R, Zhang J. A novel dimensionality reduction technique based on independent component analysis for modeling microarray gene expression data Proceedings of the International Conference On Artificial Intelligence, Ic-Ai'04. 2: 1133-1139.  0.92
2004 Liu H, Yuan X, Tang Q, Kustra R. An efficient method to estimate labelled sample size for transductive LDA(QDA/MDA) based on bayes risk Lecture Notes in Artificial Intelligence (Subseries of Lecture Notes in Computer Science). 3201: 274-285.  0.92
2004 Liu H, Yang X, Wu D, Yuan X, Zhang J, Kustra R. Statistical issues with labeled sample size analysis for semi-supervised linear discriminant analysis Proceedings of the International Conference On Artificial Intelligence, Ic-Ai'04. 2: 1007-1012.  0.92
2002 Strother SC, Anderson J, Hansen LK, Kjems U, Kustra R, Sidtis J, Frutiger S, Muley S, LaConte S, Rottenberg D. The quantitative evaluation of functional neuroimaging experiments: the NPAIRS data analysis framework. Neuroimage. 15: 747-71. PMID 11906218 DOI: 10.1006/nimg.2001.1034  0.92
2001 Kustra R, Strother S. Penalized discriminant analysis of [15o]-water PET brain images with prediction error selection of smoothness and regularization hyperparameters Ieee Transactions On Medical Imaging. 20: 376-387. PMID 11403197 DOI: 10.1109/42.925291  0.92
1999 Wong DT, Cheng DCH, Kustra R, Tibshirani R, Karski J, Carroll-Munro J, Sandler A. Risk factors of delayed extubation, prolonged length of stay in the intensive care unit, and mortality in patients undergoing coronary artery bypass graft with fast-track cardiac anesthesia: A new cardiac risk score Anesthesiology. 91: 936-944. PMID 10519495 DOI: 10.1097/00000542-199910000-00012  0.92
Show low-probability matches.