Elizabeth M. Cherry, Ph.D. - Publications

Affiliations: 
2000 Duke University, Durham, NC 
Area:
Computer Science, Biomedical Engineering

64 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Berman JP, Kaboudian A, Uzelac I, Iravanian S, Iles T, Iaizzo PA, Lim H, Smolka S, Glimm J, Cherry EM, Fenton FH. Interactive 3D Human Heart Simulations on Segmented Human MRI Hearts. Computing in Cardiology. 48. PMID 35754523 DOI: 10.23919/cinc53138.2021.9662948  0.335
2022 Kaboudian A, Cherry EM, Fenton FH. Real-Time Interactive Simulations of Complex Ionic Cardiac Cell Models in 2D and 3D Heart Structures with GPUs on Personal Computers. Computing in Cardiology. 48. PMID 35754517 DOI: 10.23919/cinc53138.2021.9662759  0.306
2021 Marcotte CD, Fenton FH, Hoffman MJ, Cherry EM. Robust data assimilation with noise: Applications to cardiac dynamics. Chaos (Woodbury, N.Y.). 31: 013118. PMID 33754752 DOI: 10.1063/5.0033539  0.327
2020 Hoffman MJ, Cherry EM. Sensitivity of a data-assimilation system for reconstructing three-dimensional cardiac electrical dynamics. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 378: 20190388. PMID 32448069 DOI: 10.1098/Rsta.2019.0388  0.428
2020 Niederer SA, Aboelkassem Y, Cantwell CD, Corrado C, Coveney S, Cherry EM, Delhaas T, Fenton FH, Panfilov AV, Pathmanathan P, Plank G, Riabiz M, Roney CH, Dos Santos RW, Wang L. Creation and application of virtual patient cohorts of heart models. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 378: 20190558. PMID 32448064 DOI: 10.1098/Rsta.2019.0558  0.354
2020 Mendez MJ, Hoffman MJ, Cherry EM, Lemmon CA, Weinberg SH. Cell Fate Forecasting: A Data-Assimilation Approach to Predict Epithelial-Mesenchymal Transition. Biophysical Journal. PMID 32101715 DOI: 10.1016/J.Bpj.2020.02.011  0.315
2019 Moreira Gomes J, Lobosco M, Weber Dos Santos R, Cherry EM. Delay differential equation-based models of cardiac tissue: Efficient implementation and effects on spiral-wave dynamics. Chaos (Woodbury, N.Y.). 29: 123128. PMID 31893668 DOI: 10.1063/1.5128240  0.402
2019 Loppini A, Gizzi A, Cherubini C, Cherry EM, Fenton FH, Filippi S. Spatiotemporal correlation uncovers characteristic lengths in cardiac tissue. Physical Review. E. 100: 020201. PMID 31574686 DOI: 10.1103/Physreve.100.020201  0.436
2019 Ganesan P, Cherry EM, Huang DT, Pertsov AM, Ghoraani B. Locating Atrial Fibrillation Rotor and Focal Sources Using Iterative Navigation of Multipole Diagnostic Catheters. Cardiovascular Engineering and Technology. PMID 30989616 DOI: 10.1007/S13239-019-00414-5  0.314
2019 Kaboudian A, Cherry EM, Fenton FH. Real-time interactive simulations of large-scale systems on personal computers and cell phones: Toward patient-specific heart modeling and other applications. Science Advances. 5: eaav6019. PMID 30944861 DOI: 10.1126/Sciadv.Aav6019  0.425
2019 Ganesan P, Salmin A, Cherry EM, Huang DT, Pertsov AM, Ghoraani B. Iterative Navigation of Multipole Diagnostic Catheters to Locate Repeating-pattern Atrial Fibrillation Drivers. Journal of Cardiovascular Electrophysiology. PMID 30725499 DOI: 10.1111/Jce.13872  0.316
2019 Kaboudian A, Cherry EM, Fenton FH. Large-scale interactive numerical experiments of chaos, solitons and fractals in real time via GPU in a web browser Chaos, Solitons & Fractals. 121: 6-29. DOI: 10.1016/J.Chaos.2019.01.005  0.346
2018 Ulysses J, Berg L, Cherry E, Liu BR, Weber Dos Santos R, de Barros BG, Rocha BM, de Queiroz RAB. An optimization-based algorithm for the construction of cardiac Purkinje network models. Ieee Transactions On Bio-Medical Engineering. PMID 29993430 DOI: 10.1109/Tbme.2018.2815504  0.34
2017 Uzelac I, Ji YC, Hornung D, Schröder-Scheteling J, Luther S, Gray RA, Cherry EM, Fenton FH. Simultaneous Quantification of Spatially Discordant Alternans in Voltage and Intracellular Calcium in Langendorff-Perfused Rabbit Hearts and Inconsistencies with Models of Cardiac Action Potentials and Ca Transients. Frontiers in Physiology. 8: 819. PMID 29104543 DOI: 10.3389/Fphys.2017.00819  0.435
2017 LaVigne NS, Holt N, Hoffman MJ, Cherry EM. Effects of model error on cardiac electrical wave state reconstruction using data assimilation. Chaos (Woodbury, N.Y.). 27: 093911. PMID 28964160 DOI: 10.1063/1.4999603  0.433
2017 Cherry EM. Distinguishing mechanisms for alternans in cardiac cells using constant-diastolic-interval pacing. Chaos (Woodbury, N.Y.). 27: 093902. PMID 28964159 DOI: 10.1063/1.4999354  0.343
2017 Cairns DI, Fenton FH, Cherry EM. Efficient parameterization of cardiac action potential models using a genetic algorithm. Chaos (Woodbury, N.Y.). 27: 093922. PMID 28964158 DOI: 10.1063/1.5000354  0.397
2017 Gomes JM, Dos Santos RW, Cherry EM. Alternans promotion in cardiac electrophysiology models by delay differential equations. Chaos (Woodbury, N.Y.). 27: 093915. PMID 28964124 DOI: 10.1063/1.4999471  0.428
2017 Cherry EM, Fenton FH, Krogh-Madsen T, Luther S, Parlitz U. Introduction to Focus Issue: Complex Cardiac Dynamics. Chaos (Woodbury, N.Y.). 27: 093701. PMID 28964109 DOI: 10.1063/1.5003940  0.374
2017 Gizzi A, Loppini A, Cherry EM, Cherubini C, Fenton FH, Filippi S. Multi-band decomposition analysis: application to cardiac alternans as a function of temperature. Physiological Measurement. 38: 833-847. PMID 28448275 DOI: 10.1088/1361-6579/Aa64Af  0.346
2016 Eastman J, Sass J, Gomes JM, Dos Santos RW, Cherry EM. Using Delay Differential Equations to Induce Alternans in a Model of Cardiac Electrophysiology. Journal of Theoretical Biology. PMID 27302910 DOI: 10.1016/J.Jtbi.2016.06.009  0.444
2016 Hoffman MJ, LaVigne NS, Scorse ST, Fenton FH, Cherry EM. Reconstructing three-dimensional reentrant cardiac electrical wave dynamics using data assimilation. Chaos (Woodbury, N.Y.). 26: 013107. PMID 26826859 DOI: 10.1063/1.4940238  0.44
2016 Xue S, Lim H, Glimm J, Fenton FH, Cherry EM. Sharp boundary electrocardiac simulations Siam Journal On Scientific Computing. 38: B100-B117. DOI: 10.1137/15M1019283  0.317
2015 dos Santos RW, Alonso S, Cherry EM, Sundnes J. Simulations of Heart Function. Biomed Research International. 2015: 626378. PMID 26640790 DOI: 10.1155/2015/626378  0.374
2015 Liu BR, Cherry EM. Image-Based Structural Modeling of the Cardiac Purkinje Network. Biomed Research International. 2015: 621034. PMID 26583120 DOI: 10.1155/2015/621034  0.314
2015 Bueno-Orovio A, Cherry EM, Evans SJ, Fenton FH. Basis for the Induction of Tissue-Level Phase-2 Reentry as a Repolarization Disorder in the Brugada Syndrome. Biomed Research International. 2015: 197586. PMID 26583094 DOI: 10.1155/2015/197586  0.32
2015 Ganesan P, Cherry EM, Pertsov AM, Ghoraani B. Characterization of Electrograms from Multipolar Diagnostic Catheters during Atrial Fibrillation. Biomed Research International. 2015: 272954. PMID 26581316 DOI: 10.1155/2015/272954  0.355
2015 Elshrif MM, Shi P, Cherry EM. Representing variability and transmural differences in a model of human heart failure. Ieee Journal of Biomedical and Health Informatics. 19: 1308-20. PMID 26068919 DOI: 10.1109/Jbhi.2015.2442833  0.401
2015 Bell MM, Cherry EM. Computational cardiac electrophysiology: implementing mathematical models of cardiomyocytes to simulate action potentials of the heart. Methods in Molecular Biology (Clifton, N.J.). 1299: 65-74. PMID 25836575 DOI: 10.1007/978-1-4939-2572-8_5  0.459
2015 Ariful Islam M, Murthy A, Bartocci E, Cherry EM, Fenton FH, Glimm J, Smolka SA, Grosu R. Model-order reduction of ion channel dynamics using approximate bisimulation Theoretical Computer Science. 599: 34-46. DOI: 10.1016/J.Tcs.2014.03.018  0.339
2014 Elshrif MM, Pengcheng Shi, Cherry EM. Electrophysiological properties under heart failure conditions in a human ventricular cell: a modeling study. Conference Proceedings : ... Annual International Conference of the Ieee Engineering in Medicine and Biology Society. Ieee Engineering in Medicine and Biology Society. Annual Conference. 2014: 4324-9. PMID 25570949 DOI: 10.1109/EMBC.2014.6944581  0.31
2014 Elshrif MM, Cherry EM. A quantitative comparison of the behavior of human ventricular cardiac electrophysiology models in tissue. Plos One. 9: e84401. PMID 24416228 DOI: 10.1371/Journal.Pone.0084401  0.465
2014 Elshrif MM, Shi P, Cherry EM. Quantitative analysis of rate-dependent of human heart failure action potential model on alternans onset and arrhythmias Computing in Cardiology. 41: 693-696.  0.302
2013 Bragard J, Simic A, Elorza J, Grigoriev RO, Cherry EM, Gilmour RF, Otani NF, Fenton FH. Shock-induced termination of reentrant cardiac arrhythmias: comparing monophasic and biphasic shock protocols. Chaos (Woodbury, N.Y.). 23: 043119. PMID 24387558 DOI: 10.1063/1.4829632  0.382
2013 Murthy A, Bartocci E, Fenton FH, Glimm J, Gray RA, Cherry EM, Smolka SA, Grosu R. Curvature analysis of cardiac excitation wavefronts. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 10: 323-36. PMID 23929858 DOI: 10.1109/Tcbb.2012.125  0.441
2013 Gizzi A, Cherry EM, Gilmour RF, Luther S, Filippi S, Fenton FH. Effects of pacing site and stimulation history on alternans dynamics and the development of complex spatiotemporal patterns in cardiac tissue. Frontiers in Physiology. 4: 71. PMID 23637684 DOI: 10.3389/Fphys.2013.00071  0.406
2013 Bragard J, Elorza J, Cherry EM, Fenton FH. Validation of a computational model of cardiac defibrillation Computing in Cardiology. 40: 851-854.  0.312
2012 Murthy A, Bartocci E, Fenton FH, Glimm J, Gray RA, Cherry EM, Smolka SA, Grosu R. Curvature Analysis of Cardiac Excitation Wavefronts. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. PMID 23027553  0.344
2012 Cherry EM, Fenton FH, Gilmour RF. Mechanisms of ventricular arrhythmias: a dynamical systems-based perspective. American Journal of Physiology. Heart and Circulatory Physiology. 302: H2451-63. PMID 22467299 DOI: 10.1152/Ajpheart.00770.2011  0.403
2012 Cherry EM, Fenton FH. Contribution of the Purkinje network to wave propagation in the canine ventricle: Insights from a combined electrophysiological-anatomical model Nonlinear Dynamics. 68: 365-379. DOI: 10.1007/S11071-011-0221-1  0.375
2011 Bartocci E, Singh R, von Stein FB, Amedome A, Caceres AJ, Castillo J, Closser E, Deards G, Goltsev A, Ines RS, Isbilir C, Marc JK, Moore D, Pardi D, Sadhu S, ... ... Cherry EM, et al. Teaching cardiac electrophysiology modeling to undergraduate students: laboratory exercises and GPU programming for the study of arrhythmias and spiral wave dynamics. Advances in Physiology Education. 35: 427-37. PMID 22139782 DOI: 10.1152/Advan.00034.2011  0.384
2011 Niederer SA, Kerfoot E, Benson AP, Bernabeu MO, Bernus O, Bradley C, Cherry EM, Clayton R, Fenton FH, Garny A, Heidenreich E, Land S, Maleckar M, Pathmanathan P, Plank G, et al. Verification of cardiac tissue electrophysiology simulators using an N-version benchmark. Philosophical Transactions. Series a, Mathematical, Physical, and Engineering Sciences. 369: 4331-51. PMID 21969679 DOI: 10.1098/Rsta.2011.0139  0.412
2011 Cherry EM, Fenton FH. Effects of boundaries and geometry on the spatial distribution of action potential duration in cardiac tissue. Journal of Theoretical Biology. 285: 164-76. PMID 21762703 DOI: 10.1016/J.Jtbi.2011.06.039  0.377
2011 Luther S, Fenton FH, Kornreich BG, Squires A, Bittihn P, Hornung D, Zabel M, Flanders J, Gladuli A, Campoy L, Cherry EM, Luther G, Hasenfuss G, Krinsky VI, Pumir A, et al. Low-energy control of electrical turbulence in the heart. Nature. 475: 235-9. PMID 21753855 DOI: 10.1038/Nature10216  0.405
2011 Clayton RH, Bernus O, Cherry EM, Dierckx H, Fenton FH, Mirabella L, Panfilov AV, Sachse FB, Seemann G, Zhang H. Models of cardiac tissue electrophysiology: progress, challenges and open questions. Progress in Biophysics and Molecular Biology. 104: 22-48. PMID 20553746 DOI: 10.1016/J.Pbiomolbio.2010.05.008  0.435
2011 Fink M, Niederer SA, Cherry EM, Fenton FH, Koivumäki JT, Seemann G, Thul R, Zhang H, Sachse FB, Beard D, Crampin EJ, Smith NP. Cardiac cell modelling: observations from the heart of the cardiac physiome project. Progress in Biophysics and Molecular Biology. 104: 2-21. PMID 20303361 DOI: 10.1016/J.Pbiomolbio.2010.03.002  0.441
2011 Bartocci E, Cherry EM, Glimm J, Grosu R, Smolka SA, Fenton FH. Toward real-time simulation of cardiac dynamics Proceedings of the 9th International Conference On Computational Methods in Systems Biology, Cmsb'11. 103-112. DOI: 10.1145/2037509.2037525  0.383
2010 Cherry EM, Fenton FH. Realistic cardiac electrophysiology modelling: are we just a heartbeat away? The Journal of Physiology. 588: 2689. PMID 20675816 DOI: 10.1113/Jphysiol.2010.194357  0.399
2009 Fenton FH, Luther S, Cherry EM, Otani NF, Krinsky V, Pumir A, Bodenschatz E, Gilmour RF. Termination of atrial fibrillation using pulsed low-energy far-field stimulation. Circulation. 120: 467-76. PMID 19635972 DOI: 10.1161/Circulationaha.108.825091  0.338
2008 Otani NF, Mo A, Mannava S, Fenton FH, Cherry EM, Luther S, Gilmour RF. Characterization of multiple spiral wave dynamics as a stochastic predator-prey system. Physical Review. E, Statistical, Nonlinear, and Soft Matter Physics. 78: 021913. PMID 18850871 DOI: 10.1103/Physreve.78.021913  0.366
2008 Cherry EM, Evans SJ. Properties of two human atrial cell models in tissue: restitution, memory, propagation, and reentry. Journal of Theoretical Biology. 254: 674-90. PMID 18652834 DOI: 10.1016/J.Jtbi.2008.06.030  0.437
2008 Cherry EM, Hastings HM, Evans SJ. Dynamics of human atrial cell models: restitution, memory, and intracellular calcium dynamics in single cells. Progress in Biophysics and Molecular Biology. 98: 24-37. PMID 18617227 DOI: 10.1016/J.Pbiomolbio.2008.05.002  0.408
2008 Bueno-Orovio A, Cherry EM, Fenton FH. Minimal model for human ventricular action potentials in tissue. Journal of Theoretical Biology. 253: 544-60. PMID 18495166 DOI: 10.1016/J.Jtbi.2008.03.029  0.453
2008 Fenton F, Cherry E. Models of cardiac cell Scholarpedia. 3: 1868. DOI: 10.4249/Scholarpedia.1868  0.41
2008 Cherry EM, Fenton FH. Visualization of spiral and scroll waves in simulated and experimental cardiac tissue New Journal of Physics. 10. DOI: 10.1088/1367-2630/10/12/125016  0.465
2007 Cherry EM, Fenton FH. A tale of two dogs: analyzing two models of canine ventricular electrophysiology. American Journal of Physiology. Heart and Circulatory Physiology. 292: H43-55. PMID 16997886 DOI: 10.1152/Ajpheart.00955.2006  0.466
2005 Fenton FH, Cherry EM, Karma A, Rappel WJ. Modeling wave propagation in realistic heart geometries using the phase-field method. Chaos (Woodbury, N.Y.). 15: 13502. PMID 15836267 DOI: 10.1063/1.1840311  0.414
2005 Fenton FH, Cherry EM, Gray RA, Hastings HM, Evans SJ. Fibrillation without alternans in porcine ventricles Heart Rhythm. 2: S301-S302. DOI: 10.1016/J.Hrthm.2005.02.950  0.325
2003 Cherry EM, Greenside HS, Henriquez CS. Efficient simulation of three-dimensional anisotropic cardiac tissue using an adaptive mesh refinement method. Chaos (Woodbury, N.Y.). 13: 853-65. PMID 12946177 DOI: 10.1063/1.1594685  0.631
2003 Fenton FH, Cherry EM, Hastings HM, Evans SJ. Computers and arrhythmias: Computational approaches to understanding cardiac electrical dynamics Computational Fluid and Solid Mechanics 2003. 1683-1686. DOI: 10.1016/B978-008044046-0.50409-7  0.306
2002 Fenton FH, Cherry EM, Hastings HM, Evans SJ. Multiple mechanisms of spiral wave breakup in a model of cardiac electrical activity. Chaos (Woodbury, N.Y.). 12: 852-892. PMID 12779613 DOI: 10.1063/1.1504242  0.472
2002 Fenton FH, Cherry EM, Hastings HM, Evans SJ. Real-time computer simulations of excitable media: JAVA as a scientific language and as a wrapper for C and FORTRAN programs. Bio Systems. 64: 73-96. PMID 11755491 DOI: 10.1016/S0303-2647(01)00177-0  0.438
2001 Cherry EM, Xie F, Feliciano Z, Garfinkel A. Computer modeling of atrial fibrillation Cardiac Electrophysiology Review. 5: 271-276. DOI: 10.1023/A:1011417824640  0.338
2000 Cherry EM, Greenside HS, Henriquez CS. A space-time adaptive method for simulating complex cardiac dynamics. Physical Review Letters. 84: 1343-6. PMID 11017514 DOI: 10.1103/Physrevlett.84.1343  0.654
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